RNA–Protein interactions for RNA: ENST00000528910.5

USP35-202, Transcript of ubiquitin specific peptidase 35, humanhuman

TSL 1 (best)

Gene USP35, Length 1,209 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP35-202ENST00000528910 RNASE8Q8TDE3 154 aaKnown RBP12.35□□□□□ -0.43
USP35-202ENST00000528910 C16orf74Q96GX8 76 aa12.35□□□□□ -0.43
USP35-202ENST00000528910 AGPAT4-IT1Q9H0P7 198 aa12.35□□□□□ -0.43
USP35-202ENST00000528910 APLNQ9ULZ1 77 aa12.35□□□□□ -0.43
USP35-202ENST00000528910 IGHV4-4A0A075B6R2 117 aa12.34□□□□□ -0.43
USP35-202ENST00000528910 RBAKDNA6NC62 111 aa12.34□□□□□ -0.43
USP35-202ENST00000528910 LYRM9A8MSI8 78 aa12.34□□□□□ -0.43
USP35-202ENST00000528910 IGLL5B9A064 214 aa12.34□□□□□ -0.43
USP35-202ENST00000528910 LY6G6CO95867 125 aa12.34□□□□□ -0.43
USP35-202ENST00000528910 SLC25A5P05141 298 aaKnown RBP12.34□□□□□ -0.43
USP35-202ENST00000528910 AZU1P20160 251 aa12.34□□□□□ -0.43
USP35-202ENST00000528910 RPL7L1Q6DKI1 246 aaKnown RBP12.34□□□□□ -0.43
USP35-202ENST00000528910 TMEM263Q8WUH6 116 aaKnown RBP12.34□□□□□ -0.43
USP35-202ENST00000528910 SH3BGRL3Q9H299 93 aa12.34□□□□□ -0.43
USP35-202ENST00000528910 BORCS7-ASMTA0A0B4J1R7 106 aa12.33□□□□□ -0.44
USP35-202ENST00000528910 TRBV7-9A0A0J9YWB2 115 aa12.33□□□□□ -0.44
USP35-202ENST00000528910 MBP02144 154 aa12.33□□□□□ -0.44
USP35-202ENST00000528910 NMBP08949 121 aa12.33□□□□□ -0.44
USP35-202ENST00000528910 STAG3L2P0CL84 134 aa12.33□□□□□ -0.44
USP35-202ENST00000528910 STAG3L3P0CL85 134 aa12.33□□□□□ -0.44
USP35-202ENST00000528910 RANP62826 216 aaKnown RBP12.33□□□□□ -0.44
USP35-202ENST00000528910 ZNF493Q6ZR52 646 aa12.33□□□□□ -0.44
USP35-202ENST00000528910 GNPNAT1Q96EK6 184 aaPredicted RBP12.33□□□□□ -0.44
USP35-202ENST00000528910 VGLL1Q99990 258 aa12.33□□□□□ -0.44
USP35-202ENST00000528910 ZNF492Q9P255 531 aa12.33□□□□□ -0.44
USP35-202ENST00000528910 C7orf71A4D174 169 aa12.32□□□□□ -0.44
USP35-202ENST00000528910 ARPC5O15511 151 aa12.32□□□□□ -0.44
USP35-202ENST00000528910 ARL14EPLP0DKL9 152 aa12.32□□□□□ -0.44
USP35-202ENST00000528910 CSN1S1P47710 185 aa12.32□□□□□ -0.44
USP35-202ENST00000528910 TMEM78Q5T7P6 136 aa12.32□□□□□ -0.44
USP35-202ENST00000528910 ZFAND2AQ8N6M9 145 aa12.32□□□□□ -0.44
USP35-202ENST00000528910 PYGO2Q9BRQ0 406 aa12.32□□□□□ -0.44
USP35-202ENST00000528910 OTORQ9NRC9 128 aa12.32□□□□□ -0.44
USP35-202ENST00000528910 TRAV12-3A0A0B4J271 114 aa12.31□□□□□ -0.44
USP35-202ENST00000528910 J3KRW8 73 aa12.31□□□□□ -0.44
USP35-202ENST00000528910 TAAR5O14804 337 aa12.31□□□□□ -0.44
USP35-202ENST00000528910 DAD1P61803 113 aa12.31□□□□□ -0.44
USP35-202ENST00000528910 ZNF345Q14585 488 aa12.31□□□□□ -0.44
USP35-202ENST00000528910 SUN5Q8TC36 379 aa12.31□□□□□ -0.44
USP35-202ENST00000528910 RAB24Q969Q5 203 aa12.31□□□□□ -0.44
USP35-202ENST00000528910 DIRC3C9JPN6 131 aa12.3□□□□□ -0.44
USP35-202ENST00000528910 SMLR1H3BR10 107 aa12.3□□□□□ -0.44
USP35-202ENST00000528910 HMGB3O15347 200 aaKnown RBP12.3□□□□□ -0.44
USP35-202ENST00000528910 ZNF138P52744 262 aa12.3□□□□□ -0.44
USP35-202ENST00000528910 BTN1A1Q13410 526 aa12.3□□□□□ -0.44
USP35-202ENST00000528910 PRR9Q5T870 116 aa12.3□□□□□ -0.44
USP35-202ENST00000528910 ARL6IP6Q8N6S5 226 aa12.3□□□□□ -0.44
USP35-202ENST00000528910 Q8TAT8 98 aa12.3□□□□□ -0.44
USP35-202ENST00000528910 RXFP4Q8TDU9 374 aa12.3□□□□□ -0.44
USP35-202ENST00000528910 FAM210BQ96KR6 192 aa12.3□□□□□ -0.44
USP35-202ENST00000528910 LINC00467Q9BRT7 94 aa12.3□□□□□ -0.44
USP35-202ENST00000528910 PLA2G2EQ9NZK7 142 aa12.3□□□□□ -0.44
USP35-202ENST00000528910 ZNF324O75467 553 aaPredicted RBP12.29□□□□□ -0.44
USP35-202ENST00000528910 HTN1P15515 57 aa12.29□□□□□ -0.44
USP35-202ENST00000528910 CD300CQ08708 224 aa12.29□□□□□ -0.44
USP35-202ENST00000528910 TMED6Q8WW62 240 aa12.29□□□□□ -0.44
USP35-202ENST00000528910 CYTL1Q9NRR1 136 aa12.29□□□□□ -0.44
USP35-202ENST00000528910 TIMM8BQ9Y5J9 83 aaPredicted RBP12.29□□□□□ -0.44
USP35-202ENST00000528910 VPS13DQ5THJ4 4388 aa12.28□□□□□ -0.44
USP35-202ENST00000528910 GCHFRP30047 84 aa12.28□□□□□ -0.44
USP35-202ENST00000528910 FAM74A1Q5RGS3 127 aa12.28□□□□□ -0.44
USP35-202ENST00000528910 SSX7Q7RTT5 188 aa12.28□□□□□ -0.44
USP35-202ENST00000528910 LINC00612Q8N6U2 182 aa12.28□□□□□ -0.44
USP35-202ENST00000528910 NDUFAF3Q9BU61 184 aa12.28□□□□□ -0.44
USP35-202ENST00000528910 ACTR3CQ9C0K3 210 aaPredicted RBP12.28□□□□□ -0.44
USP35-202ENST00000528910 LENEPQ9Y5L5 61 aa12.28□□□□□ -0.44
USP35-202ENST00000528910 PGPA6NDG6 321 aa12.27□□□□□ -0.45
USP35-202ENST00000528910 HMSDA8MTL9 139 aa12.27□□□□□ -0.45
USP35-202ENST00000528910 CXorf1O96002 111 aa12.27□□□□□ -0.45
USP35-202ENST00000528910 GPX1P07203 203 aa12.27□□□□□ -0.45
USP35-202ENST00000528910 CCDC28AQ8IWP9 274 aa12.27□□□□□ -0.45
USP35-202ENST00000528910 KCNRGQ8N5I3 272 aa12.27□□□□□ -0.45
USP35-202ENST00000528910 OR11H4Q8NGC9 324 aa12.27□□□□□ -0.45
USP35-202ENST00000528910 CMTM2Q8TAZ6 248 aa12.27□□□□□ -0.45
USP35-202ENST00000528910 ZNF726P1Q15940 193 aa12.26□□□□□ -0.45
USP35-202ENST00000528910 ANXA2RQ3ZCQ2 193 aa12.26□□□□□ -0.45
USP35-202ENST00000528910 C11orf72Q8NBR9 251 aa12.26□□□□□ -0.45
USP35-202ENST00000528910 ZNF680Q8NEM1 530 aa12.26□□□□□ -0.45
USP35-202ENST00000528910 ST6GAL2Q96JF0 529 aa12.26□□□□□ -0.45
USP35-202ENST00000528910 TMEM167BQ9NRX6 74 aa12.26□□□□□ -0.45
USP35-202ENST00000528910 DNAH6Q9C0G6 4158 aa12.26□□□□□ -0.45
USP35-202ENST00000528910 EPPK1P58107 5090 aaKnown RBP12.25□□□□□ -0.45
USP35-202ENST00000528910 CTXND1A0A1B0GTU2 59 aa12.25□□□□□ -0.45
USP35-202ENST00000528910 DEFB130BP0DP73 79 aa12.25□□□□□ -0.45
USP35-202ENST00000528910 DEFB130AP0DP74 79 aa12.25□□□□□ -0.45
USP35-202ENST00000528910 RNASE4P34096 147 aaKnown RBP12.25□□□□□ -0.45
USP35-202ENST00000528910 HYLS1Q96M11 299 aa12.25□□□□□ -0.45
USP35-202ENST00000528910 ARPC5LQ9BPX5 153 aa12.25□□□□□ -0.45
USP35-202ENST00000528910 NOP10Q9NPE3 64 aaKnown RBP12.25□□□□□ -0.45
USP35-202ENST00000528910 SERTM2A0A1B0GWG4 89 aa12.24□□□□□ -0.45
USP35-202ENST00000528910 SNURFLB1AK76 121 aa12.24□□□□□ -0.45
USP35-202ENST00000528910 HTN3P15516 51 aa12.24□□□□□ -0.45
USP35-202ENST00000528910 KMT2AQ03164 3969 aa12.24□□□□□ -0.45
USP35-202ENST00000528910 DAZ2Q13117 558 aaKnown RBP12.24□□□□□ -0.45
USP35-202ENST00000528910 AKR1C8PQ5T2L2 129 aa12.24□□□□□ -0.45
USP35-202ENST00000528910 GOLT1AQ6ZVE7 132 aa12.24□□□□□ -0.45
USP35-202ENST00000528910 EIF4E3Q8N5X7 224 aaKnown RBP12.24□□□□□ -0.45
USP35-202ENST00000528910 C5orf17Q8NAS9 161 aa12.24□□□□□ -0.45
USP35-202ENST00000528910 CBY3A6NI87 242 aa12.23□□□□□ -0.45
USP35-202ENST00000528910 GGTLC3B5MD39 225 aa12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 61.2 ms