RNA–Protein interactions for RNA: ENST00000528787.1

SSBP3-211, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 4

Gene SSBP3, Length 577 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-211ENST00000528787 GOLT1AQ6ZVE7 132 aa5.87□□□□□ -1.47
SSBP3-211ENST00000528787 SSX7Q7RTT5 188 aa5.87□□□□□ -1.47
SSBP3-211ENST00000528787 APRG1Q8IVJ8 170 aa5.87□□□□□ -1.47
SSBP3-211ENST00000528787 CCDC28AQ8IWP9 274 aa5.87□□□□□ -1.47
SSBP3-211ENST00000528787 SPATA25Q9BR10 227 aa5.87□□□□□ -1.47
SSBP3-211ENST00000528787 NIPSNAP3BQ9BS92 247 aa5.87□□□□□ -1.47
SSBP3-211ENST00000528787 TMEM208Q9BTX3 173 aa5.87□□□□□ -1.47
SSBP3-211ENST00000528787 TMPRSS5Q9H3S3 457 aa5.87□□□□□ -1.47
SSBP3-211ENST00000528787 MED9Q9NWA0 146 aa5.87□□□□□ -1.47
SSBP3-211ENST00000528787 ZNF492Q9P255 531 aa5.87□□□□□ -1.47
SSBP3-211ENST00000528787 RPH3ALQ9UNE2 315 aa5.87□□□□□ -1.47
SSBP3-211ENST00000528787 SELENOKQ9Y6D0 94 aa5.87□□□□□ -1.47
SSBP3-211ENST00000528787 LOC102723971A0A1B0GUV8 181 aa5.86□□□□□ -1.47
SSBP3-211ENST00000528787 TMEM189A5PLL7 270 aa5.86□□□□□ -1.47
SSBP3-211ENST00000528787 CA1P00915 261 aaPredicted RBP5.86□□□□□ -1.47
SSBP3-211ENST00000528787 FRMD6-AS1P0C7T7 363 aa5.86□□□□□ -1.47
SSBP3-211ENST00000528787 CRISP2P16562 243 aa5.86□□□□□ -1.47
SSBP3-211ENST00000528787 DEFA6Q01524 100 aa5.86□□□□□ -1.47
SSBP3-211ENST00000528787 HAGHQ16775 308 aa5.86□□□□□ -1.47
SSBP3-211ENST00000528787 TMEM183BQ1AE95 376 aa5.86□□□□□ -1.47
SSBP3-211ENST00000528787 SMUG1Q53HV7 270 aa5.86□□□□□ -1.47
SSBP3-211ENST00000528787 FAM24BQ8N5W8 94 aa5.86□□□□□ -1.47
SSBP3-211ENST00000528787 C11orf52Q96A22 123 aa5.86□□□□□ -1.47
SSBP3-211ENST00000528787 C20orf173Q96LM9 149 aa5.86□□□□□ -1.47
SSBP3-211ENST00000528787 IGF2BP2-AS1Q96M15 143 aa5.86□□□□□ -1.47
SSBP3-211ENST00000528787 RCHY1Q96PM5 261 aa5.86□□□□□ -1.47
SSBP3-211ENST00000528787 ASCL2Q99929 193 aa5.86□□□□□ -1.47
SSBP3-211ENST00000528787 B9D2Q9BPU9 175 aa5.86□□□□□ -1.47
SSBP3-211ENST00000528787 TREM1Q9NP99 234 aa5.86□□□□□ -1.47
SSBP3-211ENST00000528787 PLA2G2EQ9NZK7 142 aa5.86□□□□□ -1.47
SSBP3-211ENST00000528787 KLF12Q9Y4X4 402 aa5.86□□□□□ -1.47
SSBP3-211ENST00000528787 YTHDF2Q9Y5A9 579 aaKnown RBP5.86□□□□□ -1.47
SSBP3-211ENST00000528787 TRAV21A0A0B4J279 112 aa5.85□□□□□ -1.47
SSBP3-211ENST00000528787 TEX48A0A1B0GUV7 120 aa5.85□□□□□ -1.47
SSBP3-211ENST00000528787 KNCNA6PVL3 124 aa5.85□□□□□ -1.47
SSBP3-211ENST00000528787 ZNF705FA8MVS1 300 aaPredicted RBP5.85□□□□□ -1.47
SSBP3-211ENST00000528787 H7BYZ3 331 aa5.85□□□□□ -1.47
SSBP3-211ENST00000528787 K7EIL1 84 aa5.85□□□□□ -1.47
SSBP3-211ENST00000528787 M0R3E3 92 aa5.85□□□□□ -1.47
SSBP3-211ENST00000528787 SNRPCP09234 159 aaKnown RBP5.85□□□□□ -1.47
SSBP3-211ENST00000528787 RPL35AP18077 110 aaKnown RBP5.85□□□□□ -1.47
SSBP3-211ENST00000528787 GNG4P50150 75 aa5.85□□□□□ -1.47
SSBP3-211ENST00000528787 NDUFA5Q16718 116 aa5.85□□□□□ -1.47
SSBP3-211ENST00000528787 IGFL4Q6B9Z1 124 aa5.85□□□□□ -1.47
SSBP3-211ENST00000528787 KCNS1Q96KK3 526 aa5.85□□□□□ -1.47
SSBP3-211ENST00000528787 PYGO2Q9BRQ0 406 aa5.85□□□□□ -1.47
SSBP3-211ENST00000528787 PSG8Q9UQ74 426 aa5.85□□□□□ -1.47
SSBP3-211ENST00000528787 LY96Q9Y6Y9 160 aa5.85□□□□□ -1.47
SSBP3-211ENST00000528787 NOTCH1P46531 2555 aa5.84□□□□□ -1.47
SSBP3-211ENST00000528787 IGKV2-40A0A087WW87 121 aaPredicted RBP5.84□□□□□ -1.47
SSBP3-211ENST00000528787 XKRY2A2RUG3 117 aa5.84□□□□□ -1.47
SSBP3-211ENST00000528787 C7orf71A4D174 169 aa5.84□□□□□ -1.47
SSBP3-211ENST00000528787 C9JCJ5 164 aa5.84□□□□□ -1.47
SSBP3-211ENST00000528787 IGKV2D-40P01614 121 aaPredicted RBP5.84□□□□□ -1.47
SSBP3-211ENST00000528787 MIFP14174 115 aa5.84□□□□□ -1.47
SSBP3-211ENST00000528787 ATP5G3P48201 142 aa5.84□□□□□ -1.47
SSBP3-211ENST00000528787 CCL20P78556 96 aa5.84□□□□□ -1.47
SSBP3-211ENST00000528787 TOR2AQ5JU69 321 aa5.84□□□□□ -1.47
SSBP3-211ENST00000528787 LINC00322Q6ZN03 302 aaPredicted RBP5.84□□□□□ -1.47
SSBP3-211ENST00000528787 ZNF493Q6ZR52 646 aa5.84□□□□□ -1.47
SSBP3-211ENST00000528787 BAGE2Q86Y30 109 aa5.84□□□□□ -1.47
SSBP3-211ENST00000528787 TMEM183AQ8IXX5 376 aa5.84□□□□□ -1.47
SSBP3-211ENST00000528787 DAZAP1Q96EP5 407 aaKnown RBP5.84□□□□□ -1.47
SSBP3-211ENST00000528787 AGPAT4-IT1Q9H0P7 198 aa5.84□□□□□ -1.47
SSBP3-211ENST00000528787 SLC35B3Q9H1N7 401 aa5.84□□□□□ -1.47
SSBP3-211ENST00000528787 NBEAL1Q6ZS30 2694 aa5.84□□□□□ -1.47
SSBP3-211ENST00000528787 RBMY1BA6NDE4 496 aaKnown RBP5.83□□□□□ -1.48
SSBP3-211ENST00000528787 RBMY1EA6NEQ0 496 aaKnown RBP5.83□□□□□ -1.48
SSBP3-211ENST00000528787 FABP5P3A8MUU1 101 aa5.83□□□□□ -1.48
SSBP3-211ENST00000528787 KLLNB2CW77 178 aa5.83□□□□□ -1.48
SSBP3-211ENST00000528787 F6UB75 175 aa5.83□□□□□ -1.48
SSBP3-211ENST00000528787 SPRY2O43597 315 aa5.83□□□□□ -1.48
SSBP3-211ENST00000528787 EIF3GO75821 320 aaKnown RBP eCLIP5.83□□□□□ -1.48
SSBP3-211ENST00000528787 LTAP01374 205 aa5.83□□□□□ -1.48
SSBP3-211ENST00000528787 IGKV3-20P01619 116 aa5.83□□□□□ -1.48
SSBP3-211ENST00000528787 RBMY1DP0C7P1 496 aaKnown RBP5.83□□□□□ -1.48
SSBP3-211ENST00000528787 HLA-DMBP28068 263 aa5.83□□□□□ -1.48
SSBP3-211ENST00000528787 RPL35P42766 123 aaKnown RBP5.83□□□□□ -1.48
SSBP3-211ENST00000528787 SOHLH1Q5JUK2 328 aa5.83□□□□□ -1.48
SSBP3-211ENST00000528787 FAM162BQ5T6X4 162 aa5.83□□□□□ -1.48
SSBP3-211ENST00000528787 FAM159AQ6UWV7 190 aa5.83□□□□□ -1.48
SSBP3-211ENST00000528787 PRNTQ86SH4 94 aa5.83□□□□□ -1.48
SSBP3-211ENST00000528787 Q86TA4 180 aa5.83□□□□□ -1.48
SSBP3-211ENST00000528787 RNF183Q96D59 192 aa5.83□□□□□ -1.48
SSBP3-211ENST00000528787 NEU1Q99519 415 aa5.83□□□□□ -1.48
SSBP3-211ENST00000528787 VGLL1Q99990 258 aa5.83□□□□□ -1.48
SSBP3-211ENST00000528787 AGRNO00468 2067 aa5.83□□□□□ -1.48
SSBP3-211ENST00000528787 TRGV11A0A075B6L2 103 aa5.82□□□□□ -1.48
SSBP3-211ENST00000528787 SCO2A0A1W2PP80 73 aa5.82□□□□□ -1.48
SSBP3-211ENST00000528787 ZNF727A8MUV8 499 aa5.82□□□□□ -1.48
SSBP3-211ENST00000528787 PRAC2D3DTV9 90 aa5.82□□□□□ -1.48
SSBP3-211ENST00000528787 PFN1P07737 140 aaKnown RBP5.82□□□□□ -1.48
SSBP3-211ENST00000528787 RPS20P60866 119 aaKnown RBP5.82□□□□□ -1.48
SSBP3-211ENST00000528787 GNG5P63218 68 aa5.82□□□□□ -1.48
SSBP3-211ENST00000528787 PNRC1Q12796 327 aaPredicted RBP5.82□□□□□ -1.48
SSBP3-211ENST00000528787 SPINK13Q1W4C9 94 aa5.82□□□□□ -1.48
SSBP3-211ENST00000528787 RRN3P1Q2M238 152 aa5.82□□□□□ -1.48
SSBP3-211ENST00000528787 GDF5OSQ5U4N7 250 aa5.82□□□□□ -1.48
SSBP3-211ENST00000528787 Q6AWC8 147 aa5.82□□□□□ -1.48
SSBP3-211ENST00000528787 AMTNQ6UX39 209 aa5.82□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 95.2 ms