RNA–Protein interactions for RNA: ENST00000524773.5

CAPN1-202, Transcript of calpain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAPN1, Length 2,960 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-202ENST00000524773 TNFRSF13BO14836 293 aaPredicted RBP10.29□□□□□ -0.76
CAPN1-202ENST00000524773 IGLV1-47P01700 117 aa10.29□□□□□ -0.76
CAPN1-202ENST00000524773 HSD52Q0P140 79 aa10.29□□□□□ -0.76
CAPN1-202ENST00000524773 GFRALQ6UXV0 394 aa10.29□□□□□ -0.76
CAPN1-202ENST00000524773 RNF182Q8N6D2 247 aa10.29□□□□□ -0.76
CAPN1-202ENST00000524773 GTSF1LQ9H1H1 148 aa10.29□□□□□ -0.76
CAPN1-202ENST00000524773 NHP2Q9NX24 153 aaKnown RBP10.29□□□□□ -0.76
CAPN1-202ENST00000524773 JKAMPQ9P055 326 aa10.29□□□□□ -0.76
CAPN1-202ENST00000524773 AGRNO00468 2067 aa10.29□□□□□ -0.76
CAPN1-202ENST00000524773 MRPS12O15235 138 aaKnown RBP10.29□□□□□ -0.76
CAPN1-202ENST00000524773 RPS20P60866 119 aaKnown RBP10.29□□□□□ -0.76
CAPN1-202ENST00000524773 FOXC1Q12948 553 aa10.29□□□□□ -0.76
CAPN1-202ENST00000524773 LGALS9BQ3B8N2 356 aa10.29□□□□□ -0.76
CAPN1-202ENST00000524773 LGALS9CQ6DKI2 356 aa10.29□□□□□ -0.76
CAPN1-202ENST00000524773 IGFL3Q6UXB1 125 aa10.29□□□□□ -0.76
CAPN1-202ENST00000524773 NUP37Q8NFH4 326 aa10.29□□□□□ -0.76
CAPN1-202ENST00000524773 NPFFR1Q9GZQ6 430 aa10.29□□□□□ -0.76
CAPN1-202ENST00000524773 CUBNO60494 3623 aa10.28□□□□□ -0.76
CAPN1-202ENST00000524773 TMEM238LA0A1B0GVL6 79 aa10.28□□□□□ -0.76
CAPN1-202ENST00000524773 E7EQL1 145 aa10.28□□□□□ -0.76
CAPN1-202ENST00000524773 SAMD5Q5TGI4 173 aa10.28□□□□□ -0.76
CAPN1-202ENST00000524773 PVRIGQ6DKI7 326 aa10.28□□□□□ -0.76
CAPN1-202ENST00000524773 ZNF575Q86XF7 245 aa10.28□□□□□ -0.76
CAPN1-202ENST00000524773 PRAC2D3DTV9 90 aa10.28□□□□□ -0.76
CAPN1-202ENST00000524773 PAX8Q06710 450 aa10.28□□□□□ -0.76
CAPN1-202ENST00000524773 AMTNQ6UX39 209 aa10.28□□□□□ -0.76
CAPN1-202ENST00000524773 AAMDCQ9H7C9 122 aa10.28□□□□□ -0.76
CAPN1-202ENST00000524773 TMEM160Q9NX00 188 aa10.28□□□□□ -0.76
CAPN1-202ENST00000524773 S100A7AQ86SG5 101 aa10.27□□□□□ -0.76
CAPN1-202ENST00000524773 FOXC2Q99958 501 aa10.27□□□□□ -0.76
CAPN1-202ENST00000524773 TMEM95Q3KNT9 176 aa10.27□□□□□ -0.77
CAPN1-202ENST00000524773 ZNF493Q6ZR52 646 aa10.27□□□□□ -0.77
CAPN1-202ENST00000524773 PPIAL4CA0A0B4J2A2 164 aa10.26□□□□□ -0.77
CAPN1-202ENST00000524773 PPIAL4GP0DN37 164 aa10.26□□□□□ -0.77
CAPN1-202ENST00000524773 FCER1GP30273 86 aa10.26□□□□□ -0.77
CAPN1-202ENST00000524773 PRR25Q96S07 402 aa10.26□□□□□ -0.77
CAPN1-202ENST00000524773 ANKHD1Q8IWZ3 2542 aaKnown RBP10.26□□□□□ -0.77
CAPN1-202ENST00000524773 J3KRW8 73 aa10.26□□□□□ -0.77
CAPN1-202ENST00000524773 NDPQ00604 133 aa10.26□□□□□ -0.77
CAPN1-202ENST00000524773 PRR30Q53SZ7 412 aaPredicted RBP10.26□□□□□ -0.77
CAPN1-202ENST00000524773 NCBP2LA6PVI3 153 aaKnown RBP10.26□□□□□ -0.77
CAPN1-202ENST00000524773 TRGV3P03979 118 aa10.26□□□□□ -0.77
CAPN1-202ENST00000524773 FABP2P12104 132 aa10.26□□□□□ -0.77
CAPN1-202ENST00000524773 SMAGPQ0VAQ4 97 aa10.26□□□□□ -0.77
CAPN1-202ENST00000524773 SFTA2Q6UW10 78 aa10.26□□□□□ -0.77
CAPN1-202ENST00000524773 Q6ZS92 163 aa10.26□□□□□ -0.77
CAPN1-202ENST00000524773 NEGR1Q7Z3B1 354 aa10.26□□□□□ -0.77
CAPN1-202ENST00000524773 MAPKAPK5-AS1Q8N8E1 139 aa10.26□□□□□ -0.77
CAPN1-202ENST00000524773 RNF185Q96GF1 192 aa10.26□□□□□ -0.77
CAPN1-202ENST00000524773 U3KQK5 164 aa10.26□□□□□ -0.77
CAPN1-202ENST00000524773 SPTBN4Q9H254 2564 aa10.25□□□□□ -0.77
CAPN1-202ENST00000524773 TRAV40A0A0B4J280 105 aa10.25□□□□□ -0.77
CAPN1-202ENST00000524773 WFDC2Q14508 124 aa10.25□□□□□ -0.77
CAPN1-202ENST00000524773 ZC2HC1BQ5TFG8 222 aa10.25□□□□□ -0.77
CAPN1-202ENST00000524773 ZNF562Q6V9R5 426 aa10.25□□□□□ -0.77
CAPN1-202ENST00000524773 SH2D6Q7Z4S9 175 aa10.25□□□□□ -0.77
CAPN1-202ENST00000524773 TMEM158Q8WZ71 300 aa10.25□□□□□ -0.77
CAPN1-202ENST00000524773 KLK15Q9H2R5 256 aa10.25□□□□□ -0.77
CAPN1-202ENST00000524773 ATRXP46100 2492 aa10.25□□□□□ -0.77
CAPN1-202ENST00000524773 SMIM13P0DJ93 91 aa10.25□□□□□ -0.77
CAPN1-202ENST00000524773 TMEM190Q8WZ59 177 aa10.25□□□□□ -0.77
CAPN1-202ENST00000524773 CHAC1Q9BUX1 264 aa10.25□□□□□ -0.77
CAPN1-202ENST00000524773 HHLA3Q9XRX5 114 aa10.25□□□□□ -0.77
CAPN1-202ENST00000524773 SMAD5-AS1Q9Y6J3 95 aa10.25□□□□□ -0.77
CAPN1-202ENST00000524773 ODF1Q14990 250 aa10.24□□□□□ -0.77
CAPN1-202ENST00000524773 TMEM8BA6NDV4 472 aa10.24□□□□□ -0.77
CAPN1-202ENST00000524773 F8W735 103 aaPredicted RBP10.24□□□□□ -0.77
CAPN1-202ENST00000524773 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP10.24□□□□□ -0.77
CAPN1-202ENST00000524773 IGHG4P01861 327 aa10.24□□□□□ -0.77
CAPN1-202ENST00000524773 DYNAPQ8N1N2 210 aa10.24□□□□□ -0.77
CAPN1-202ENST00000524773 OR9G4Q8NGQ1 327 aa10.24□□□□□ -0.77
CAPN1-202ENST00000524773 FAM57AQ8TBR7 257 aa10.24□□□□□ -0.77
CAPN1-202ENST00000524773 FANCD2OSQ96PS1 177 aa10.24□□□□□ -0.77
CAPN1-202ENST00000524773 TRBV25-1A0A075B6N4 114 aa10.23□□□□□ -0.77
CAPN1-202ENST00000524773 TNFRSF6BO95407 300 aa10.23□□□□□ -0.77
CAPN1-202ENST00000524773 EFNA4P52798 201 aa10.23□□□□□ -0.77
CAPN1-202ENST00000524773 LINC01560Q8TB33 94 aa10.23□□□□□ -0.77
CAPN1-202ENST00000524773 PTPRQQ9UMZ3 2332 aa10.23□□□□□ -0.77
CAPN1-202ENST00000524773 SHISA9B4DS77 424 aa10.23□□□□□ -0.77
CAPN1-202ENST00000524773 H3BMG7 143 aa10.23□□□□□ -0.77
CAPN1-202ENST00000524773 NDUFA3O95167 84 aa10.23□□□□□ -0.77
CAPN1-202ENST00000524773 IL17RELQ6ZVW7 336 aa10.23□□□□□ -0.77
CAPN1-202ENST00000524773 GATD1Q8NB37 220 aa10.23□□□□□ -0.77
CAPN1-202ENST00000524773 OR4X2Q8NGF9 303 aa10.23□□□□□ -0.77
CAPN1-202ENST00000524773 UFC1Q9Y3C8 167 aa10.23□□□□□ -0.77
CAPN1-202ENST00000524773 GRNP28799 593 aaKnown RBP10.22□□□□□ -0.77
CAPN1-202ENST00000524773 WFDC12Q8WWY7 111 aa10.22□□□□□ -0.77
CAPN1-202ENST00000524773 ARPC1AQ92747 370 aa10.22□□□□□ -0.77
CAPN1-202ENST00000524773 MAP1LC3AQ9H492 121 aa10.22□□□□□ -0.77
CAPN1-202ENST00000524773 MRPL35Q9NZE8 188 aaKnown RBP10.22□□□□□ -0.77
CAPN1-202ENST00000524773 VSTM5A8MXK1 200 aa10.22□□□□□ -0.77
CAPN1-202ENST00000524773 INSL3P51460 131 aa10.22□□□□□ -0.77
CAPN1-202ENST00000524773 Q6AWC8 147 aa10.22□□□□□ -0.77
CAPN1-202ENST00000524773 CLEC2AQ6UVW9 174 aa10.22□□□□□ -0.77
CAPN1-202ENST00000524773 CFHR4Q92496 578 aa10.22□□□□□ -0.77
CAPN1-202ENST00000524773 A0A1B0GW15 77 aa10.21□□□□□ -0.77
CAPN1-202ENST00000524773 A6NJY4 79 aa10.21□□□□□ -0.77
CAPN1-202ENST00000524773 AZU1P20160 251 aa10.21□□□□□ -0.77
CAPN1-202ENST00000524773 C11orf21Q9P2W6 132 aa10.21□□□□□ -0.77
CAPN1-202ENST00000524773 NBR2O15453 112 aa10.21□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 74.1 ms