RNA–Protein interactions for RNA: ENST00000522552.5

SKP1-209, Transcript of S-phase kinase associated protein 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SKP1, Length 1,683 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-209ENST00000522552 KRTAP2-2Q9BYT5 123 aa2.39□□□□□ -2.03
SKP1-209ENST00000522552 CXCL16Q9H2A7 254 aa2.39□□□□□ -2.03
SKP1-209ENST00000522552 SCAF11Q99590 1463 aaKnown RBP2.39□□□□□ -2.03
SKP1-209ENST00000522552 SDK2Q58EX2 2172 aa2.39□□□□□ -2.03
SKP1-209ENST00000522552 COLCA2A8K830 154 aa2.38□□□□□ -2.03
SKP1-209ENST00000522552 M0R233 179 aa2.38□□□□□ -2.03
SKP1-209ENST00000522552 YPEL1O60688 119 aa2.38□□□□□ -2.03
SKP1-209ENST00000522552 PMP2P02689 132 aa2.38□□□□□ -2.03
SKP1-209ENST00000522552 CRPP02741 224 aa2.38□□□□□ -2.03
SKP1-209ENST00000522552 BRS3P32247 399 aa2.38□□□□□ -2.03
SKP1-209ENST00000522552 KRTAP10-6P60371 365 aaPredicted RBP2.38□□□□□ -2.03
SKP1-209ENST00000522552 PLPP5Q8NEB5 264 aa2.38□□□□□ -2.03
SKP1-209ENST00000522552 C20orf166-AS1Q96NR2 134 aa2.38□□□□□ -2.03
SKP1-209ENST00000522552 HIGD2AQ9BW72 106 aa2.38□□□□□ -2.03
SKP1-209ENST00000522552 CST11Q9H112 138 aa2.38□□□□□ -2.03
SKP1-209ENST00000522552 KLK12Q9UKR0 248 aa2.38□□□□□ -2.03
SKP1-209ENST00000522552 CFTRP13569 1480 aa2.38□□□□□ -2.03
SKP1-209ENST00000522552 CECR2Q9BXF3 1484 aa2.38□□□□□ -2.03
SKP1-209ENST00000522552 IGLV3-16A0A075B6K0 115 aa2.37□□□□□ -2.03
SKP1-209ENST00000522552 TRAV1-1A0A0B4J248 108 aa2.37□□□□□ -2.03
SKP1-209ENST00000522552 PNMA8CA0A1B0GUJ8 204 aa2.37□□□□□ -2.03
SKP1-209ENST00000522552 ZNF736B4DX44 427 aaPredicted RBP2.37□□□□□ -2.03
SKP1-209ENST00000522552 HYPMO75409 117 aa2.37□□□□□ -2.03
SKP1-209ENST00000522552 IFITM1P13164 125 aa2.37□□□□□ -2.03
SKP1-209ENST00000522552 ETV6P41212 452 aa2.37□□□□□ -2.03
SKP1-209ENST00000522552 ZNF345Q14585 488 aa2.37□□□□□ -2.03
SKP1-209ENST00000522552 LINC00301Q8NCQ3 95 aa2.37□□□□□ -2.03
SKP1-209ENST00000522552 OR2T35Q8NGX2 323 aa2.37□□□□□ -2.03
SKP1-209ENST00000522552 LSM10Q969L4 123 aaKnown RBP2.37□□□□□ -2.03
SKP1-209ENST00000522552 RAB37Q96AX2 223 aa2.37□□□□□ -2.03
SKP1-209ENST00000522552 SERP1Q9Y6X1 66 aa2.37□□□□□ -2.03
SKP1-209ENST00000522552 AKAP11Q9UKA4 1901 aa2.37□□□□□ -2.03
SKP1-209ENST00000522552 RP1P56715 2156 aa2.37□□□□□ -2.03
SKP1-209ENST00000522552 APOC4-APOC2K7ER74 178 aa2.37□□□□□ -2.03
SKP1-209ENST00000522552 PSCAO43653 123 aa2.37□□□□□ -2.03
SKP1-209ENST00000522552 APOC2P02655 101 aa2.37□□□□□ -2.03
SKP1-209ENST00000522552 ASB16-AS1Q495Z4 193 aa2.37□□□□□ -2.03
SKP1-209ENST00000522552 SPINK14Q6IE38 97 aa2.37□□□□□ -2.03
SKP1-209ENST00000522552 ATP11AUNQ6ZP68 121 aa2.37□□□□□ -2.03
SKP1-209ENST00000522552 ZNF826PQ6ZT77 177 aa2.37□□□□□ -2.03
SKP1-209ENST00000522552 TTC9CQ8N5M4 171 aa2.37□□□□□ -2.03
SKP1-209ENST00000522552 PSMF1Q92530 271 aa2.37□□□□□ -2.03
SKP1-209ENST00000522552 SLC50A1Q9BRV3 221 aa2.37□□□□□ -2.03
SKP1-209ENST00000522552 C14orf132Q9NPU4 83 aa2.37□□□□□ -2.03
SKP1-209ENST00000522552 SEC16AO15027 2179 aa2.36□□□□□ -2.03
SKP1-209ENST00000522552 KTN1Q86UP2 1357 aaKnown RBP2.36□□□□□ -2.03
SKP1-209ENST00000522552 MICAL3Q7RTP6 2002 aa2.36□□□□□ -2.03
SKP1-209ENST00000522552 HEATR5BQ9P2D3 2071 aa2.36□□□□□ -2.03
SKP1-209ENST00000522552 TRAV40A0A0B4J280 105 aa2.36□□□□□ -2.03
SKP1-209ENST00000522552 IGHV1-24A0A0C4DH33 117 aa2.36□□□□□ -2.03
SKP1-209ENST00000522552 OOSP1A8MZH6 123 aa2.36□□□□□ -2.03
SKP1-209ENST00000522552 MCRIP1C9JLW8 97 aa2.36□□□□□ -2.03
SKP1-209ENST00000522552 ZNF791Q3KP31 576 aaPredicted RBP2.36□□□□□ -2.03
SKP1-209ENST00000522552 C9orf153Q5TBE3 101 aa2.36□□□□□ -2.03
SKP1-209ENST00000522552 FOXI2Q6ZQN5 318 aa2.36□□□□□ -2.03
SKP1-209ENST00000522552 C4orf33Q8N1A6 199 aa2.36□□□□□ -2.03
SKP1-209ENST00000522552 SVBPQ8N300 66 aa2.36□□□□□ -2.03
SKP1-209ENST00000522552 FAM19A2Q8N3H0 131 aa2.36□□□□□ -2.03
SKP1-209ENST00000522552 C9orf62Q8N4C0 152 aa2.36□□□□□ -2.03
SKP1-209ENST00000522552 LINC00526Q96FQ7 95 aa2.36□□□□□ -2.03
SKP1-209ENST00000522552 MCM3APO60318 1980 aa2.36□□□□□ -2.03
SKP1-209ENST00000522552 MAPKBP1O60336 1514 aa2.35□□□□□ -2.03
SKP1-209ENST00000522552 NRKQ7Z2Y5 1582 aa2.35□□□□□ -2.03
SKP1-209ENST00000522552 IGLV2-18A0A075B6J9 118 aa2.35□□□□□ -2.03
SKP1-209ENST00000522552 LOC107984156A0A0G2JMH3 177 aa2.35□□□□□ -2.03
SKP1-209ENST00000522552 HMSDA8MTL9 139 aa2.35□□□□□ -2.03
SKP1-209ENST00000522552 ZNF705FA8MVS1 300 aaPredicted RBP2.35□□□□□ -2.03
SKP1-209ENST00000522552 ODF3BA8MYP8 253 aa2.35□□□□□ -2.03
SKP1-209ENST00000522552 MT3P25713 68 aa2.35□□□□□ -2.03
SKP1-209ENST00000522552 SPANXN5Q5MJ07 72 aa2.35□□□□□ -2.03
SKP1-209ENST00000522552 ARL17AQ8IVW1 177 aa2.35□□□□□ -2.03
SKP1-209ENST00000522552 Q8N9L7 120 aa2.35□□□□□ -2.03
SKP1-209ENST00000522552 OR8B3Q8NGG8 313 aa2.35□□□□□ -2.03
SKP1-209ENST00000522552 ATP6V0E2Q8NHE4 81 aa2.35□□□□□ -2.03
SKP1-209ENST00000522552 Q96M85 177 aa2.35□□□□□ -2.03
SKP1-209ENST00000522552 KIDINS220Q9ULH0 1771 aa2.35□□□□□ -2.03
SKP1-209ENST00000522552 PHIPQ8WWQ0 1821 aa2.35□□□□□ -2.03
SKP1-209ENST00000522552 MYO16Q9Y6X6 1858 aa2.34□□□□□ -2.03
SKP1-209ENST00000522552 C3orf85A0A1B0GTC6 90 aa2.34□□□□□ -2.03
SKP1-209ENST00000522552 C5orf67F2Z3F1 127 aa2.34□□□□□ -2.03
SKP1-209ENST00000522552 BAALC-AS2P0C853 105 aa2.34□□□□□ -2.03
SKP1-209ENST00000522552 ZNF846Q147U1 533 aa2.34□□□□□ -2.03
SKP1-209ENST00000522552 LCE1EQ5T753 118 aa2.34□□□□□ -2.03
SKP1-209ENST00000522552 Q6AWC8 147 aa2.34□□□□□ -2.03
SKP1-209ENST00000522552 Q6ZS92 163 aa2.34□□□□□ -2.03
SKP1-209ENST00000522552 FP248Q71RG6 208 aaPredicted RBP2.34□□□□□ -2.03
SKP1-209ENST00000522552 OR4X2Q8NGF9 303 aa2.34□□□□□ -2.03
SKP1-209ENST00000522552 NOP16Q9Y3C1 178 aaKnown RBP2.34□□□□□ -2.03
SKP1-209ENST00000522552 NUMA1Q14980 2115 aa2.34□□□□□ -2.03
SKP1-209ENST00000522552 MYLKQ15746 1914 aa2.34□□□□□ -2.03
SKP1-209ENST00000522552 NINQ8N4C6 2090 aa2.34□□□□□ -2.04
SKP1-209ENST00000522552 TMSB15BA0A087X1C1 80 aa2.34□□□□□ -2.04
SKP1-209ENST00000522552 CGAP01215 116 aa2.34□□□□□ -2.04
SKP1-209ENST00000522552 HRES1P13985 223 aa2.34□□□□□ -2.04
SKP1-209ENST00000522552 HMGN2P46Q86SG4 172 aa2.34□□□□□ -2.04
SKP1-209ENST00000522552 LINC00269Q8N2A0 174 aa2.34□□□□□ -2.04
SKP1-209ENST00000522552 Q9H521 79 aa2.34□□□□□ -2.04
SKP1-209ENST00000522552 PRR34Q9NV39 138 aa2.34□□□□□ -2.04
SKP1-209ENST00000522552 BCORL1Q5H9F3 1711 aa2.33□□□□□ -2.04
SKP1-209ENST00000522552 IGLV10-54A0A075B6I4 117 aa2.33□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms