RNA–Protein interactions for RNA: ENST00000521932.1

VPS13B-210, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 3

Gene VPS13B, Length 1,055 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-210ENST00000521932 RANP62826 216 aaKnown RBP6.13□□□□□ -1.43
VPS13B-210ENST00000521932 ACTL10Q5JWF8 245 aa6.13□□□□□ -1.43
VPS13B-210ENST00000521932 GDF5OSQ5U4N7 250 aa6.13□□□□□ -1.43
VPS13B-210ENST00000521932 ALKAL2Q6UX46 152 aa6.13□□□□□ -1.43
VPS13B-210ENST00000521932 STHQ8IWL8 128 aa6.13□□□□□ -1.43
VPS13B-210ENST00000521932 KIR2DL5AQ8N109 375 aa6.13□□□□□ -1.43
VPS13B-210ENST00000521932 EXOC3-AS1Q8N2X6 119 aa6.13□□□□□ -1.43
VPS13B-210ENST00000521932 KIR2DL5BQ8NHK3 375 aa6.13□□□□□ -1.43
VPS13B-210ENST00000521932 FAM213BQ8TBF2 198 aa6.13□□□□□ -1.43
VPS13B-210ENST00000521932 RPUSD4Q96CM3 377 aaKnown RBP6.13□□□□□ -1.43
VPS13B-210ENST00000521932 B9D2Q9BPU9 175 aa6.13□□□□□ -1.43
VPS13B-210ENST00000521932 AAMDCQ9H7C9 122 aa6.13□□□□□ -1.43
VPS13B-210ENST00000521932 HLA-DRB4X5D2U9 266 aa6.13□□□□□ -1.43
VPS13B-210ENST00000521932 A0A1W2PRE2 83 aa6.12□□□□□ -1.43
VPS13B-210ENST00000521932 MAP1LC3B2A6NCE7 125 aa6.12□□□□□ -1.43
VPS13B-210ENST00000521932 KNCNA6PVL3 124 aa6.12□□□□□ -1.43
VPS13B-210ENST00000521932 ZNF705FA8MVS1 300 aaPredicted RBP6.12□□□□□ -1.43
VPS13B-210ENST00000521932 F6UB75 175 aa6.12□□□□□ -1.43
VPS13B-210ENST00000521932 M0R3E3 92 aa6.12□□□□□ -1.43
VPS13B-210ENST00000521932 DEFB1P60022 68 aa6.12□□□□□ -1.43
VPS13B-210ENST00000521932 EBLN2Q6P2I7 272 aa6.12□□□□□ -1.43
VPS13B-210ENST00000521932 TEX261Q6UWH6 196 aa6.12□□□□□ -1.43
VPS13B-210ENST00000521932 SBSPONQ8IVN8 264 aa6.12□□□□□ -1.43
VPS13B-210ENST00000521932 ZNF738Q8NE65 137 aa6.12□□□□□ -1.43
VPS13B-210ENST00000521932 RXFP4Q8TDU9 374 aa6.12□□□□□ -1.43
VPS13B-210ENST00000521932 SFT2D1Q8WV19 159 aa6.12□□□□□ -1.43
VPS13B-210ENST00000521932 MAP1LC3BQ9GZQ8 125 aa6.12□□□□□ -1.43
VPS13B-210ENST00000521932 CSTL1Q9H114 145 aa6.12□□□□□ -1.43
VPS13B-210ENST00000521932 Q9H3A6 140 aa6.12□□□□□ -1.43
VPS13B-210ENST00000521932 OTORQ9NRC9 128 aa6.12□□□□□ -1.43
VPS13B-210ENST00000521932 PGPA6NDG6 321 aa6.11□□□□□ -1.43
VPS13B-210ENST00000521932 PRAC2D3DTV9 90 aa6.11□□□□□ -1.43
VPS13B-210ENST00000521932 UBE2CO00762 179 aa6.11□□□□□ -1.43
VPS13B-210ENST00000521932 DUSP14O95147 198 aaKnown RBP6.11□□□□□ -1.43
VPS13B-210ENST00000521932 CNN1P51911 297 aaKnown RBP6.11□□□□□ -1.43
VPS13B-210ENST00000521932 APOC4P55056 127 aa6.11□□□□□ -1.43
VPS13B-210ENST00000521932 FGF8P55075 233 aaPredicted RBP6.11□□□□□ -1.43
VPS13B-210ENST00000521932 NUTF2P61970 127 aaKnown RBP6.11□□□□□ -1.43
VPS13B-210ENST00000521932 HAGHQ16775 308 aa6.11□□□□□ -1.43
VPS13B-210ENST00000521932 FAM74A1Q5RGS3 127 aa6.11□□□□□ -1.43
VPS13B-210ENST00000521932 MORN3Q6PF18 240 aaPredicted RBP6.11□□□□□ -1.43
VPS13B-210ENST00000521932 OR8A1Q8NGG7 326 aa6.11□□□□□ -1.43
VPS13B-210ENST00000521932 LYPD6BQ8NI32 183 aa6.11□□□□□ -1.43
VPS13B-210ENST00000521932 NEU1Q99519 415 aa6.11□□□□□ -1.43
VPS13B-210ENST00000521932 NKX6-2Q9C056 277 aaPredicted RBP6.11□□□□□ -1.43
VPS13B-210ENST00000521932 ARL2-SNX15V9GYD0 113 aa6.11□□□□□ -1.43
VPS13B-210ENST00000521932 DNAH9Q9NYC9 4486 aa6.11□□□□□ -1.43
VPS13B-210ENST00000521932 RBAKDNA6NC62 111 aa6.1□□□□□ -1.43
VPS13B-210ENST00000521932 FAM74A7A6NL05 159 aa6.1□□□□□ -1.43
VPS13B-210ENST00000521932 ZNF705EA8MWA4 302 aaPredicted RBP6.1□□□□□ -1.43
VPS13B-210ENST00000521932 DIRC3C9JPN6 131 aa6.1□□□□□ -1.43
VPS13B-210ENST00000521932 TEX46H3BTG2 121 aa6.1□□□□□ -1.43
VPS13B-210ENST00000521932 HBE1P02100 147 aa6.1□□□□□ -1.43
VPS13B-210ENST00000521932 SLC25A5P05141 298 aaKnown RBP6.1□□□□□ -1.43
VPS13B-210ENST00000521932 GIG44P09565 113 aaPredicted RBP6.1□□□□□ -1.43
VPS13B-210ENST00000521932 NHLRC4P0CG21 123 aaPredicted RBP6.1□□□□□ -1.43
VPS13B-210ENST00000521932 ZNF705DP0CH99 300 aaPredicted RBP6.1□□□□□ -1.43
VPS13B-210ENST00000521932 ZNF705BP0CI00 300 aaPredicted RBP6.1□□□□□ -1.43
VPS13B-210ENST00000521932 RPL35AP18077 110 aaKnown RBP6.1□□□□□ -1.43
VPS13B-210ENST00000521932 PPT1P50897 306 aa6.1□□□□□ -1.43
VPS13B-210ENST00000521932 BLOC1S1P78537 153 aa6.1□□□□□ -1.43
VPS13B-210ENST00000521932 CCL20P78556 96 aa6.1□□□□□ -1.43
VPS13B-210ENST00000521932 AMTNQ6UX39 209 aa6.1□□□□□ -1.43
VPS13B-210ENST00000521932 C9orf47Q6ZRZ4 202 aa6.1□□□□□ -1.43
VPS13B-210ENST00000521932 Q6ZWC4 215 aa6.1□□□□□ -1.43
VPS13B-210ENST00000521932 CCDC28AQ8IWP9 274 aa6.1□□□□□ -1.43
VPS13B-210ENST00000521932 OR4B1Q8NGF8 309 aa6.1□□□□□ -1.43
VPS13B-210ENST00000521932 OR10J6PQ8NGY7 276 aa6.1□□□□□ -1.43
VPS13B-210ENST00000521932 TM2D3Q9BRN9 247 aa6.1□□□□□ -1.43
VPS13B-210ENST00000521932 PPP1R14DQ9NXH3 145 aa6.1□□□□□ -1.43
VPS13B-210ENST00000521932 PRKDCP78527 4128 aaKnown RBP6.1□□□□□ -1.43
VPS13B-210ENST00000521932 GGTLC3B5MD39 225 aa6.09□□□□□ -1.43
VPS13B-210ENST00000521932 CSN1S1P47710 185 aa6.09□□□□□ -1.43
VPS13B-210ENST00000521932 HIST1H1AQ02539 215 aaPredicted RBP6.09□□□□□ -1.43
VPS13B-210ENST00000521932 IQCF2Q8IXL9 164 aa6.09□□□□□ -1.43
VPS13B-210ENST00000521932 C5orf17Q8NAS9 161 aa6.09□□□□□ -1.43
VPS13B-210ENST00000521932 CSNK1G2-AS1Q8NCQ2 148 aa6.09□□□□□ -1.43
VPS13B-210ENST00000521932 ZNF680Q8NEM1 530 aa6.09□□□□□ -1.43
VPS13B-210ENST00000521932 CMTM2Q8TAZ6 248 aa6.09□□□□□ -1.43
VPS13B-210ENST00000521932 FAM19A4Q96LR4 140 aa6.09□□□□□ -1.43
VPS13B-210ENST00000521932 LINC00477Q96M19 166 aa6.09□□□□□ -1.43
VPS13B-210ENST00000521932 ODF3Q96PU9 254 aa6.09□□□□□ -1.43
VPS13B-210ENST00000521932 AGPAT4-IT1Q9H0P7 198 aa6.09□□□□□ -1.43
VPS13B-210ENST00000521932 EPDR1Q9UM22 224 aa6.09□□□□□ -1.43
VPS13B-210ENST00000521932 YTHDF2Q9Y5A9 579 aaKnown RBP6.09□□□□□ -1.43
VPS13B-210ENST00000521932 AGRNO00468 2067 aa6.08□□□□□ -1.44
VPS13B-210ENST00000521932 TRBV7-9A0A0J9YWB2 115 aa6.08□□□□□ -1.44
VPS13B-210ENST00000521932 SERTM2A0A1B0GWG4 89 aa6.08□□□□□ -1.44
VPS13B-210ENST00000521932 PAGE4O60829 102 aa6.08□□□□□ -1.44
VPS13B-210ENST00000521932 TNFRSF6BO95407 300 aa6.08□□□□□ -1.44
VPS13B-210ENST00000521932 IFNA7P01567 189 aa6.08□□□□□ -1.44
VPS13B-210ENST00000521932 IGKV3-20P01619 116 aa6.08□□□□□ -1.44
VPS13B-210ENST00000521932 TCRAP04437 139 aa6.08□□□□□ -1.44
VPS13B-210ENST00000521932 NMBP08949 121 aa6.08□□□□□ -1.44
VPS13B-210ENST00000521932 CT45A10P0DMU9 189 aa6.08□□□□□ -1.44
VPS13B-210ENST00000521932 UBE2G2P60604 165 aa6.08□□□□□ -1.44
VPS13B-210ENST00000521932 HIST1H2BAQ96A08 127 aa6.08□□□□□ -1.44
VPS13B-210ENST00000521932 RNF183Q96D59 192 aa6.08□□□□□ -1.44
VPS13B-210ENST00000521932 VGLL1Q99990 258 aa6.08□□□□□ -1.44
VPS13B-210ENST00000521932 TCEAL7Q9BRU2 100 aa6.08□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms