RNA–Protein interactions for RNA: ENST00000521253.1

TRIM35-203, Transcript of tripartite motif containing 35, humanhuman

TSL 1 (best) BASIC

Gene TRIM35, Length 1,215 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM35-203ENST00000521253 SMLR1H3BR10 107 aa14.71□□□□□ -0.05
TRIM35-203ENST00000521253 HMGB3O15347 200 aaKnown RBP14.71□□□□□ -0.05
TRIM35-203ENST00000521253 C9orf47Q6ZRZ4 202 aa14.71□□□□□ -0.05
TRIM35-203ENST00000521253 LYPD1Q8N2G4 141 aa14.71□□□□□ -0.05
TRIM35-203ENST00000521253 TCTAP57738 103 aa14.7□□□□□ -0.06
TRIM35-203ENST00000521253 SERF2P84101 59 aa14.7□□□□□ -0.06
TRIM35-203ENST00000521253 PQLC2Q6ZP29 291 aa14.7□□□□□ -0.06
TRIM35-203ENST00000521253 FAM19A4Q96LR4 140 aa14.7□□□□□ -0.06
TRIM35-203ENST00000521253 VGLL1Q99990 258 aa14.7□□□□□ -0.06
TRIM35-203ENST00000521253 APLNQ9ULZ1 77 aa14.7□□□□□ -0.06
TRIM35-203ENST00000521253 BORCS7-ASMTA0A0B4J1R7 106 aa14.69□□□□□ -0.06
TRIM35-203ENST00000521253 TRAV12-3A0A0B4J271 114 aa14.69□□□□□ -0.06
TRIM35-203ENST00000521253 ARPC5O15511 151 aa14.69□□□□□ -0.06
TRIM35-203ENST00000521253 CDC34P49427 236 aaPredicted RBP14.69□□□□□ -0.06
TRIM35-203ENST00000521253 TMEM78Q5T7P6 136 aa14.69□□□□□ -0.06
TRIM35-203ENST00000521253 C16orf74Q96GX8 76 aa14.69□□□□□ -0.06
TRIM35-203ENST00000521253 IGHV4-4A0A075B6R2 117 aa14.68□□□□□ -0.06
TRIM35-203ENST00000521253 LYRM9A8MSI8 78 aa14.68□□□□□ -0.06
TRIM35-203ENST00000521253 KLLNB2CW77 178 aa14.68□□□□□ -0.06
TRIM35-203ENST00000521253 MBP02144 154 aa14.68□□□□□ -0.06
TRIM35-203ENST00000521253 SLC25A5P05141 298 aaKnown RBP14.68□□□□□ -0.06
TRIM35-203ENST00000521253 CSN1S1P47710 185 aa14.68□□□□□ -0.06
TRIM35-203ENST00000521253 LGALS9CQ6DKI2 356 aa14.68□□□□□ -0.06
TRIM35-203ENST00000521253 STAG3L2P0CL84 134 aa14.67□□□□□ -0.06
TRIM35-203ENST00000521253 STAG3L3P0CL85 134 aa14.67□□□□□ -0.06
TRIM35-203ENST00000521253 ARL14EPLP0DKL9 152 aa14.67□□□□□ -0.06
TRIM35-203ENST00000521253 CRISP2P16562 243 aa14.67□□□□□ -0.06
TRIM35-203ENST00000521253 DAD1P61803 113 aa14.67□□□□□ -0.06
TRIM35-203ENST00000521253 ZNF493Q6ZR52 646 aa14.67□□□□□ -0.06
TRIM35-203ENST00000521253 RNASE8Q8TDE3 154 aaKnown RBP14.67□□□□□ -0.06
TRIM35-203ENST00000521253 RAB24Q969Q5 203 aa14.67□□□□□ -0.06
TRIM35-203ENST00000521253 GNPNAT1Q96EK6 184 aaPredicted RBP14.67□□□□□ -0.06
TRIM35-203ENST00000521253 OTORQ9NRC9 128 aa14.67□□□□□ -0.06
TRIM35-203ENST00000521253 C7orf71A4D174 169 aa14.66□□□□□ -0.06
TRIM35-203ENST00000521253 CD300CQ08708 224 aa14.66□□□□□ -0.06
TRIM35-203ENST00000521253 BTN1A1Q13410 526 aa14.66□□□□□ -0.06
TRIM35-203ENST00000521253 Q8TAT8 98 aa14.66□□□□□ -0.06
TRIM35-203ENST00000521253 TMEM263Q8WUH6 116 aaKnown RBP14.66□□□□□ -0.06
TRIM35-203ENST00000521253 HYLS1Q96M11 299 aa14.66□□□□□ -0.06
TRIM35-203ENST00000521253 ZNF492Q9P255 531 aa14.66□□□□□ -0.06
TRIM35-203ENST00000521253 KMT2AQ03164 3969 aa14.66□□□□□ -0.06
TRIM35-203ENST00000521253 PGPA6NDG6 321 aa14.65□□□□□ -0.06
TRIM35-203ENST00000521253 DIRC3C9JPN6 131 aa14.65□□□□□ -0.06
TRIM35-203ENST00000521253 NMBP08949 121 aa14.65□□□□□ -0.06
TRIM35-203ENST00000521253 HTN3P15516 51 aa14.65□□□□□ -0.06
TRIM35-203ENST00000521253 RNASE4P34096 147 aaKnown RBP14.65□□□□□ -0.06
TRIM35-203ENST00000521253 ZNF138P52744 262 aa14.65□□□□□ -0.06
TRIM35-203ENST00000521253 ZFAND2AQ8N6M9 145 aa14.65□□□□□ -0.06
TRIM35-203ENST00000521253 RXFP4Q8TDU9 374 aa14.65□□□□□ -0.06
TRIM35-203ENST00000521253 RBAKDNA6NC62 111 aa14.64□□□□□ -0.07
TRIM35-203ENST00000521253 TAAR5O14804 337 aa14.64□□□□□ -0.07
TRIM35-203ENST00000521253 ZNF324O75467 553 aaPredicted RBP14.64□□□□□ -0.07
TRIM35-203ENST00000521253 GPX1P07203 203 aa14.64□□□□□ -0.07
TRIM35-203ENST00000521253 DEFB130BP0DP73 79 aa14.64□□□□□ -0.07
TRIM35-203ENST00000521253 DEFB130AP0DP74 79 aa14.64□□□□□ -0.07
TRIM35-203ENST00000521253 PRR9Q5T870 116 aa14.64□□□□□ -0.07
TRIM35-203ENST00000521253 CCDC28AQ8IWP9 274 aa14.64□□□□□ -0.07
TRIM35-203ENST00000521253 PYGO2Q9BRQ0 406 aa14.64□□□□□ -0.07
TRIM35-203ENST00000521253 ACTR3CQ9C0K3 210 aaPredicted RBP14.64□□□□□ -0.07
TRIM35-203ENST00000521253 CYTL1Q9NRR1 136 aa14.64□□□□□ -0.07
TRIM35-203ENST00000521253 TIMM8BQ9Y5J9 83 aaPredicted RBP14.64□□□□□ -0.07
TRIM35-203ENST00000521253 GCHFRP30047 84 aa14.63□□□□□ -0.07
TRIM35-203ENST00000521253 FAM74A1Q5RGS3 127 aa14.63□□□□□ -0.07
TRIM35-203ENST00000521253 SSX7Q7RTT5 188 aa14.63□□□□□ -0.07
TRIM35-203ENST00000521253 OR11H4Q8NGC9 324 aa14.63□□□□□ -0.07
TRIM35-203ENST00000521253 CMTM2Q8TAZ6 248 aa14.63□□□□□ -0.07
TRIM35-203ENST00000521253 NDUFAF3Q9BU61 184 aa14.63□□□□□ -0.07
TRIM35-203ENST00000521253 NOP10Q9NPE3 64 aaKnown RBP14.63□□□□□ -0.07
TRIM35-203ENST00000521253 TRBV7-9A0A0J9YWB2 115 aa14.62□□□□□ -0.07
TRIM35-203ENST00000521253 SUN5Q8TC36 379 aa14.62□□□□□ -0.07
TRIM35-203ENST00000521253 RPH3ALQ9UNE2 315 aa14.62□□□□□ -0.07
TRIM35-203ENST00000521253 HMSDA8MTL9 139 aa14.6□□□□□ -0.07
TRIM35-203ENST00000521253 CXorf1O96002 111 aa14.6□□□□□ -0.07
TRIM35-203ENST00000521253 ZNF345Q14585 488 aa14.6□□□□□ -0.07
TRIM35-203ENST00000521253 ZNF726P1Q15940 193 aa14.6□□□□□ -0.07
TRIM35-203ENST00000521253 Q6ZQT7 251 aa14.6□□□□□ -0.07
TRIM35-203ENST00000521253 KCNRGQ8N5I3 272 aa14.6□□□□□ -0.07
TRIM35-203ENST00000521253 FAM210BQ96KR6 192 aa14.6□□□□□ -0.07
TRIM35-203ENST00000521253 GNG5P63218 68 aa14.59□□□□□ -0.07
TRIM35-203ENST00000521253 GOLT1AQ6ZVE7 132 aa14.59□□□□□ -0.07
TRIM35-203ENST00000521253 ARL6IP6Q8N6S5 226 aa14.59□□□□□ -0.07
TRIM35-203ENST00000521253 ST6GAL2Q96JF0 529 aa14.59□□□□□ -0.07
TRIM35-203ENST00000521253 ARPC5LQ9BPX5 153 aa14.59□□□□□ -0.07
TRIM35-203ENST00000521253 LINC00467Q9BRT7 94 aa14.59□□□□□ -0.07
TRIM35-203ENST00000521253 TMEM167BQ9NRX6 74 aa14.59□□□□□ -0.07
TRIM35-203ENST00000521253 SNURFLB1AK76 121 aa14.58□□□□□ -0.08
TRIM35-203ENST00000521253 AKR1C8PQ5T2L2 129 aa14.58□□□□□ -0.08
TRIM35-203ENST00000521253 EIF4E3Q8N5X7 224 aaKnown RBP14.58□□□□□ -0.08
TRIM35-203ENST00000521253 TMED6Q8WW62 240 aa14.58□□□□□ -0.08
TRIM35-203ENST00000521253 LENEPQ9Y5L5 61 aa14.58□□□□□ -0.08
TRIM35-203ENST00000521253 CTXND1A0A1B0GTU2 59 aa14.57□□□□□ -0.08
TRIM35-203ENST00000521253 CBY3A6NI87 242 aa14.57□□□□□ -0.08
TRIM35-203ENST00000521253 ANXA2RQ3ZCQ2 193 aa14.57□□□□□ -0.08
TRIM35-203ENST00000521253 TMEM88Q6PEY1 159 aa14.57□□□□□ -0.08
TRIM35-203ENST00000521253 IQCF2Q8IXL9 164 aa14.57□□□□□ -0.08
TRIM35-203ENST00000521253 LINC00612Q8N6U2 182 aa14.57□□□□□ -0.08
TRIM35-203ENST00000521253 DNAH6Q9C0G6 4158 aa14.56□□□□□ -0.08
TRIM35-203ENST00000521253 TRAV8-1A0A0A6YYK1 113 aa14.56□□□□□ -0.08
TRIM35-203ENST00000521253 RGS13O14921 159 aa14.56□□□□□ -0.08
TRIM35-203ENST00000521253 ATP5G1P05496 136 aa14.56□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 56.3 ms