RNA–Protein interactions for RNA: ENST00000519100.5

PABPC1-209, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 3

Gene PABPC1, Length 851 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-209ENST00000519100 PRTN3P24158 256 aa1.32□□□□□ -2.2
PABPC1-209ENST00000519100 GADD45AP24522 165 aa1.32□□□□□ -2.2
PABPC1-209ENST00000519100 ELK4P28324 431 aa1.32□□□□□ -2.2
PABPC1-209ENST00000519100 IMPA1P29218 277 aa1.32□□□□□ -2.2
PABPC1-209ENST00000519100 SNCAP37840 140 aa1.32□□□□□ -2.2
PABPC1-209ENST00000519100 HIST1H3AP68431 136 aa1.32□□□□□ -2.2
PABPC1-209ENST00000519100 HBA1P69905 142 aa1.32□□□□□ -2.2
PABPC1-209ENST00000519100 HLA-DRB3P79483 266 aa1.32□□□□□ -2.2
PABPC1-209ENST00000519100 SSBP1Q04837 148 aaKnown RBP1.32□□□□□ -2.2
PABPC1-209ENST00000519100 PMAIP1Q13794 54 aa1.32□□□□□ -2.2
PABPC1-209ENST00000519100 EDDM3AQ14507 147 aa1.32□□□□□ -2.2
PABPC1-209ENST00000519100 ELOCQ15369 112 aa1.32□□□□□ -2.2
PABPC1-209ENST00000519100 HIST3H3Q16695 136 aa1.32□□□□□ -2.2
PABPC1-209ENST00000519100 ACOT6Q3I5F7 207 aaPredicted RBP1.32□□□□□ -2.2
PABPC1-209ENST00000519100 ARHGAP11BQ3KRB8 267 aa1.32□□□□□ -2.2
PABPC1-209ENST00000519100 LGALSLQ3ZCW2 172 aaPredicted RBP1.32□□□□□ -2.2
PABPC1-209ENST00000519100 MORN2Q502X0 79 aa1.32□□□□□ -2.2
PABPC1-209ENST00000519100 PYCR3Q53H96 274 aa1.32□□□□□ -2.2
PABPC1-209ENST00000519100 TMEM97Q5BJF2 176 aa1.32□□□□□ -2.2
PABPC1-209ENST00000519100 Q5BKY6 102 aa1.32□□□□□ -2.2
PABPC1-209ENST00000519100 UBE2NLQ5JXB2 153 aa1.32□□□□□ -2.2
PABPC1-209ENST00000519100 SPANXN3Q5MJ09 141 aa1.32□□□□□ -2.2
PABPC1-209ENST00000519100 C1orf194Q5T5A4 169 aa1.32□□□□□ -2.2
PABPC1-209ENST00000519100 TMEM244Q5VVB8 128 aa1.32□□□□□ -2.2
PABPC1-209ENST00000519100 ZNF660Q6AZW8 331 aaPredicted RBP1.32□□□□□ -2.2
PABPC1-209ENST00000519100 Q6ZRU5 148 aa1.32□□□□□ -2.2
PABPC1-209ENST00000519100 TCF23Q7RTU1 214 aa1.32□□□□□ -2.2
PABPC1-209ENST00000519100 ZNF720Q7Z2F6 126 aa1.32□□□□□ -2.2
PABPC1-209ENST00000519100 GRINAQ7Z429 371 aa1.32□□□□□ -2.2
PABPC1-209ENST00000519100 LRP11Q86VZ4 500 aa1.32□□□□□ -2.2
PABPC1-209ENST00000519100 BAP18Q8IXM2 172 aa1.32□□□□□ -2.2
PABPC1-209ENST00000519100 TOMM5Q8N4H5 51 aa1.32□□□□□ -2.2
PABPC1-209ENST00000519100 LINC00471Q8N535 108 aa1.32□□□□□ -2.2
PABPC1-209ENST00000519100 OR5A2Q8NGI9 324 aa1.32□□□□□ -2.2
PABPC1-209ENST00000519100 OR51A2Q8NGJ7 313 aa1.32□□□□□ -2.2
PABPC1-209ENST00000519100 OR2T35Q8NGX2 323 aa1.32□□□□□ -2.2
PABPC1-209ENST00000519100 OR10K1Q8NGX5 313 aa1.32□□□□□ -2.2
PABPC1-209ENST00000519100 GNPDA2Q8TDQ7 276 aa1.32□□□□□ -2.2
PABPC1-209ENST00000519100 SKA2Q8WVK7 121 aaPredicted RBP1.32□□□□□ -2.2
PABPC1-209ENST00000519100 C11orf40Q8WZ69 217 aa1.32□□□□□ -2.2
PABPC1-209ENST00000519100 MRPS24Q96EL2 167 aaKnown RBP1.32□□□□□ -2.2
PABPC1-209ENST00000519100 SLC25A44Q96H78 314 aaPredicted RBP1.32□□□□□ -2.2
PABPC1-209ENST00000519100 ACY3Q96HD9 319 aa1.32□□□□□ -2.2
PABPC1-209ENST00000519100 SFRP2Q96HF1 295 aa1.32□□□□□ -2.2
PABPC1-209ENST00000519100 DIRAS2Q96HU8 199 aa1.32□□□□□ -2.2
PABPC1-209ENST00000519100 PEBP4Q96S96 227 aa1.32□□□□□ -2.2
PABPC1-209ENST00000519100 MRPL57Q9BQC6 102 aaKnown RBP1.32□□□□□ -2.2
PABPC1-209ENST00000519100 VPS25Q9BRG1 176 aa1.32□□□□□ -2.2
PABPC1-209ENST00000519100 TM2D3Q9BRN9 247 aa1.32□□□□□ -2.2
PABPC1-209ENST00000519100 FAM60AQ9NP50 221 aa1.32□□□□□ -2.2
PABPC1-209ENST00000519100 UBQLN4Q9NRR5 601 aa1.32□□□□□ -2.2
PABPC1-209ENST00000519100 UQCC1Q9NVA1 299 aa1.32□□□□□ -2.2
PABPC1-209ENST00000519100 TMEM242Q9NWH2 141 aa1.32□□□□□ -2.2
PABPC1-209ENST00000519100 NDUFB11Q9NX14 153 aa1.32□□□□□ -2.2
PABPC1-209ENST00000519100 GSKIPQ9P0R6 139 aa1.32□□□□□ -2.2
PABPC1-209ENST00000519100 MCTS1Q9ULC4 181 aaKnown RBP1.32□□□□□ -2.2
PABPC1-209ENST00000519100 HHLA2Q9UM44 414 aa1.32□□□□□ -2.2
PABPC1-209ENST00000519100 UFC1Q9Y3C8 167 aa1.32□□□□□ -2.2
PABPC1-209ENST00000519100 DNAH8Q96JB1 4490 aa1.31□□□□□ -2.2
PABPC1-209ENST00000519100 hCG_1818297A0A087WSY0 165 aa1.31□□□□□ -2.2
PABPC1-209ENST00000519100 TRAV30A0A087WSZ9 112 aa1.31□□□□□ -2.2
PABPC1-209ENST00000519100 MCRIP1C9JLW8 97 aa1.31□□□□□ -2.2
PABPC1-209ENST00000519100 F5H5P2 479 aa1.31□□□□□ -2.2
PABPC1-209ENST00000519100 F6UZH7 168 aa1.31□□□□□ -2.2
PABPC1-209ENST00000519100 H3BQ85 93 aa1.31□□□□□ -2.2
PABPC1-209ENST00000519100 C15orf65H3BRN8 121 aa1.31□□□□□ -2.2
PABPC1-209ENST00000519100 UPK2O00526 184 aa1.31□□□□□ -2.2
PABPC1-209ENST00000519100 PLA2G10O15496 165 aa1.31□□□□□ -2.2
PABPC1-209ENST00000519100 GSTZ1O43708 216 aaPredicted RBP1.31□□□□□ -2.2
PABPC1-209ENST00000519100 SLC37A4O43826 429 aa1.31□□□□□ -2.2
PABPC1-209ENST00000519100 OR2J2O76002 312 aa1.31□□□□□ -2.2
PABPC1-209ENST00000519100 CXorf1O96002 111 aa1.31□□□□□ -2.2
PABPC1-209ENST00000519100 PDYNP01213 254 aa1.31□□□□□ -2.2
PABPC1-209ENST00000519100 HTR1AP08908 422 aa1.31□□□□□ -2.2
PABPC1-209ENST00000519100 OR10J4P0C629 311 aa1.31□□□□□ -2.2
PABPC1-209ENST00000519100 NBEAP1P0C6P0 100 aa1.31□□□□□ -2.2
PABPC1-209ENST00000519100 KRTAP2-3P0C7H8 128 aa1.31□□□□□ -2.2
PABPC1-209ENST00000519100 FGF6P10767 208 aa1.31□□□□□ -2.2
PABPC1-209ENST00000519100 SLC25A4P12235 298 aa1.31□□□□□ -2.2
PABPC1-209ENST00000519100 LGALS3P17931 250 aaKnown RBP1.31□□□□□ -2.2
PABPC1-209ENST00000519100 PPIBP23284 216 aaKnown RBP1.31□□□□□ -2.2
PABPC1-209ENST00000519100 OR10J1P30954 320 aa1.31□□□□□ -2.2
PABPC1-209ENST00000519100 CD200P41217 278 aa1.31□□□□□ -2.2
PABPC1-209ENST00000519100 LINC00313P59037 77 aa1.31□□□□□ -2.2
PABPC1-209ENST00000519100 SNRPD2P62316 118 aaKnown RBP1.31□□□□□ -2.2
PABPC1-209ENST00000519100 HERVK_113P63121 156 aa1.31□□□□□ -2.2
PABPC1-209ENST00000519100 GNG3P63215 75 aa1.31□□□□□ -2.2
PABPC1-209ENST00000519100 BTN3A2P78410 334 aa1.31□□□□□ -2.2
PABPC1-209ENST00000519100 CDK6Q00534 326 aa1.31□□□□□ -2.2
PABPC1-209ENST00000519100 EBPQ15125 230 aaKnown RBP1.31□□□□□ -2.2
PABPC1-209ENST00000519100 PLPPR5Q32ZL2 321 aa1.31□□□□□ -2.2
PABPC1-209ENST00000519100 SMIM21Q3B7S5 101 aa1.31□□□□□ -2.2
PABPC1-209ENST00000519100 PYY3Q5JQD4 70 aa1.31□□□□□ -2.2
PABPC1-209ENST00000519100 FAM201AQ5SY85 155 aa1.31□□□□□ -2.2
PABPC1-209ENST00000519100 MRPL2Q5T653 305 aaKnown RBP1.31□□□□□ -2.2
PABPC1-209ENST00000519100 HENMT1Q5T8I9 393 aaKnown RBP1.31□□□□□ -2.2
PABPC1-209ENST00000519100 BCL2L15Q5TBC7 163 aa1.31□□□□□ -2.2
PABPC1-209ENST00000519100 HCP5Q6MZN7 132 aa1.31□□□□□ -2.2
PABPC1-209ENST00000519100 SMARCD3Q6STE5 483 aa1.31□□□□□ -2.2
PABPC1-209ENST00000519100 SCGB1D4Q6XE38 83 aa1.31□□□□□ -2.2
Retrieved 100 of 20,778 RNA–protein pairs in 66.7 ms