RNA–Protein interactions for RNA: ENST00000518385.5

SDC2-202, Transcript of syndecan 2, humanhuman

TSL 5 BASIC

Gene SDC2, Length 1,583 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-202ENST00000518385 OR4X2Q8NGF9 303 aa14.3□□□□□ -0.12
SDC2-202ENST00000518385 PIFOQ8TCI5 191 aa14.3□□□□□ -0.12
SDC2-202ENST00000518385 APCP25054 2843 aa14.3□□□□□ -0.12
SDC2-202ENST00000518385 CENPVL3A0A0U1RRI6 287 aa14.3□□□□□ -0.12
SDC2-202ENST00000518385 B4DSR2 109 aa14.3□□□□□ -0.12
SDC2-202ENST00000518385 MSMBP08118 114 aa14.3□□□□□ -0.12
SDC2-202ENST00000518385 PSG1P11464 419 aa14.3□□□□□ -0.12
SDC2-202ENST00000518385 CD24P25063 80 aa14.3□□□□□ -0.12
SDC2-202ENST00000518385 SRSF2Q01130 221 aaKnown RBP14.3□□□□□ -0.12
SDC2-202ENST00000518385 TMEM97Q5BJF2 176 aa14.3□□□□□ -0.12
SDC2-202ENST00000518385 GOLT1AQ6ZVE7 132 aa14.3□□□□□ -0.12
SDC2-202ENST00000518385 ZNF48Q96MX3 618 aaPredicted RBP14.3□□□□□ -0.12
SDC2-202ENST00000518385 THYN1Q9P016 225 aa14.3□□□□□ -0.12
SDC2-202ENST00000518385 PSG8Q9UQ74 426 aa14.3□□□□□ -0.12
SDC2-202ENST00000518385 WNK2Q9Y3S1 2297 aa14.29□□□□□ -0.12
SDC2-202ENST00000518385 NAV3Q8IVL0 2385 aa14.29□□□□□ -0.12
SDC2-202ENST00000518385 LYZP61626 148 aa14.29□□□□□ -0.12
SDC2-202ENST00000518385 LINC00173Q6ZV60 143 aa14.29□□□□□ -0.12
SDC2-202ENST00000518385 KRTAP1-3Q8IUG1 177 aa14.29□□□□□ -0.12
SDC2-202ENST00000518385 PLXNB1O43157 2135 aa14.28□□□□□ -0.12
SDC2-202ENST00000518385 ABCA2Q9BZC7 2435 aa14.28□□□□□ -0.12
SDC2-202ENST00000518385 NAV2Q8IVL1 2488 aa14.28□□□□□ -0.12
SDC2-202ENST00000518385 K7EIM0 57 aa14.28□□□□□ -0.12
SDC2-202ENST00000518385 IGHV3-48P01763 117 aa14.28□□□□□ -0.12
SDC2-202ENST00000518385 APELAP0DMC3 54 aa14.28□□□□□ -0.12
SDC2-202ENST00000518385 HSD52Q0P140 79 aa14.28□□□□□ -0.12
SDC2-202ENST00000518385 Q8N9W7 124 aa14.28□□□□□ -0.12
SDC2-202ENST00000518385 AP1S3Q96PC3 154 aa14.28□□□□□ -0.12
SDC2-202ENST00000518385 NBPF19A0A087WUL8 3843 aa14.28□□□□□ -0.12
SDC2-202ENST00000518385 IGHV1-69DA0A0B4J2H0 117 aa14.27□□□□□ -0.12
SDC2-202ENST00000518385 IGHV1-69P01742 117 aa14.27□□□□□ -0.12
SDC2-202ENST00000518385 GATA3P23771 443 aa14.27□□□□□ -0.12
SDC2-202ENST00000518385 PSG9Q00887 426 aa14.27□□□□□ -0.12
SDC2-202ENST00000518385 C21orf62-AS1Q17RA5 79 aa14.27□□□□□ -0.12
SDC2-202ENST00000518385 KLK9Q2XQG4 91 aa14.27□□□□□ -0.12
SDC2-202ENST00000518385 KLK9Q9UKQ9 250 aa14.27□□□□□ -0.12
SDC2-202ENST00000518385 ASH1LQ9NR48 2969 aaKnown RBP14.27□□□□□ -0.13
SDC2-202ENST00000518385 IGLV11-55A0A075B6I3 123 aa14.26□□□□□ -0.13
SDC2-202ENST00000518385 RNF223E7ERA6 249 aa14.26□□□□□ -0.13
SDC2-202ENST00000518385 SCGB2A1O75556 95 aa14.26□□□□□ -0.13
SDC2-202ENST00000518385 SIGLEC15Q6ZMC9 328 aa14.26□□□□□ -0.13
SDC2-202ENST00000518385 C2orf91Q6ZV80 131 aa14.26□□□□□ -0.13
SDC2-202ENST00000518385 LINC01356Q8N9X3 169 aa14.26□□□□□ -0.13
SDC2-202ENST00000518385 ZC2HC1AQ96GY0 325 aa14.26□□□□□ -0.13
SDC2-202ENST00000518385 MEGF9Q9H1U4 602 aa14.26□□□□□ -0.13
SDC2-202ENST00000518385 FASNP49327 2511 aaKnown RBP14.26□□□□□ -0.13
SDC2-202ENST00000518385 OR2T8A6NH00 312 aa14.26□□□□□ -0.13
SDC2-202ENST00000518385 M0QZ24 198 aa14.26□□□□□ -0.13
SDC2-202ENST00000518385 ARMS2P0C7Q2 107 aa14.26□□□□□ -0.13
SDC2-202ENST00000518385 AMMECR1LQ6DCA0 310 aa14.26□□□□□ -0.13
SDC2-202ENST00000518385 Q6ZVH6 145 aa14.26□□□□□ -0.13
SDC2-202ENST00000518385 BOD1L2Q8IYS8 172 aa14.26□□□□□ -0.13
SDC2-202ENST00000518385 ORMDL3Q8N138 153 aa14.26□□□□□ -0.13
SDC2-202ENST00000518385 PIP4P2Q8N4L2 257 aa14.26□□□□□ -0.13
SDC2-202ENST00000518385 SGK494Q96LW2 274 aa14.26□□□□□ -0.13
SDC2-202ENST00000518385 Q96MF0 132 aa14.26□□□□□ -0.13
SDC2-202ENST00000518385 AAMDCQ9H7C9 122 aa14.26□□□□□ -0.13
SDC2-202ENST00000518385 IGHV7-81A0A0B4J1V7 117 aa14.25□□□□□ -0.13
SDC2-202ENST00000518385 C7orf71A4D174 169 aa14.25□□□□□ -0.13
SDC2-202ENST00000518385 C9orf118A6NHY6 69 aa14.25□□□□□ -0.13
SDC2-202ENST00000518385 MFAP4P55083 255 aa14.25□□□□□ -0.13
SDC2-202ENST00000518385 ASPHD1Q5U4P2 390 aa14.25□□□□□ -0.13
SDC2-202ENST00000518385 FAM104BQ5XKR9 115 aa14.25□□□□□ -0.13
SDC2-202ENST00000518385 FANCD2OSQ96PS1 177 aa14.25□□□□□ -0.13
SDC2-202ENST00000518385 VPS13CQ709C8 3753 aa14.24□□□□□ -0.13
SDC2-202ENST00000518385 WI2-2373I1.2A0A1W2PRP0 233 aa14.24□□□□□ -0.13
SDC2-202ENST00000518385 HBDP02042 147 aa14.24□□□□□ -0.13
SDC2-202ENST00000518385 OR5A1Q8NGJ0 315 aa14.24□□□□□ -0.13
SDC2-202ENST00000518385 VPS25Q9BRG1 176 aa14.24□□□□□ -0.13
SDC2-202ENST00000518385 HIF1ANQ9NWT6 349 aa14.24□□□□□ -0.13
SDC2-202ENST00000518385 CSMD2Q7Z408 3487 aa14.23□□□□□ -0.13
SDC2-202ENST00000518385 GAGE12BA1L429 117 aa14.23□□□□□ -0.13
SDC2-202ENST00000518385 CBY3A6NI87 242 aa14.23□□□□□ -0.13
SDC2-202ENST00000518385 FGF6P10767 208 aa14.23□□□□□ -0.13
SDC2-202ENST00000518385 FCGR2BP31994 310 aaPredicted RBP14.23□□□□□ -0.13
SDC2-202ENST00000518385 RUSC1-AS1Q66K80 236 aa14.23□□□□□ -0.13
SDC2-202ENST00000518385 PRELID3AQ96N28 172 aa14.23□□□□□ -0.13
SDC2-202ENST00000518385 IGHV3-21A0A0B4J1V1 117 aa14.22□□□□□ -0.13
SDC2-202ENST00000518385 TMEM189A5PLL7 270 aa14.22□□□□□ -0.13
SDC2-202ENST00000518385 GAGE10A6NGK3 116 aa14.22□□□□□ -0.13
SDC2-202ENST00000518385 LINC01546A6NGU7 62 aa14.22□□□□□ -0.13
SDC2-202ENST00000518385 SMAD7O15105 426 aaKnown RBP14.22□□□□□ -0.13
SDC2-202ENST00000518385 MRPS12O15235 138 aaKnown RBP14.22□□□□□ -0.13
SDC2-202ENST00000518385 IGKV1-17P01599 117 aa14.22□□□□□ -0.13
SDC2-202ENST00000518385 BMI1P35226 326 aa14.22□□□□□ -0.13
SDC2-202ENST00000518385 NDPQ00604 133 aa14.22□□□□□ -0.13
SDC2-202ENST00000518385 FAM110DQ8TAY7 271 aaPredicted RBP14.22□□□□□ -0.13
SDC2-202ENST00000518385 ZNF414Q96IQ9 312 aa14.22□□□□□ -0.13
SDC2-202ENST00000518385 FOXC2Q99958 501 aa14.22□□□□□ -0.13
SDC2-202ENST00000518385 RABAC1Q9UI14 185 aa14.22□□□□□ -0.13
SDC2-202ENST00000518385 A0A087X0K7 114 aa14.22□□□□□ -0.13
SDC2-202ENST00000518385 EGR2P11161 476 aaPredicted RBP14.22□□□□□ -0.13
SDC2-202ENST00000518385 UFSP1Q6NVU6 142 aa14.22□□□□□ -0.13
SDC2-202ENST00000518385 EXOC3-AS1Q8N2X6 119 aa14.22□□□□□ -0.13
SDC2-202ENST00000518385 MAPK1IP1LQ8NDC0 245 aa14.22□□□□□ -0.13
SDC2-202ENST00000518385 RNF125Q96EQ8 232 aa14.22□□□□□ -0.13
SDC2-202ENST00000518385 TRAV8-1A0A0A6YYK1 113 aa14.21□□□□□ -0.14
SDC2-202ENST00000518385 ZNF785A8K8V0 405 aa14.21□□□□□ -0.14
SDC2-202ENST00000518385 CSN3P07498 182 aa14.21□□□□□ -0.14
SDC2-202ENST00000518385 IGHV4-31P0DP07 118 aa14.21□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 58.5 ms