RNA–Protein interactions for RNA: ENST00000516969.1

SCARNA20.4-201, small Cajal body-specific RNA 20, humanhuman

BASIC

Gene SCARNA20, Length 131 nt, Biotype scaRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA20.4-201ENST00000516969 HILS1P60008 231 aa4.11□□□□□ -1.75
SCARNA20.4-201ENST00000516969 SNRPEP62304 92 aaKnown RBP4.11□□□□□ -1.75
SCARNA20.4-201ENST00000516969 COX19Q49B96 90 aa4.11□□□□□ -1.75
SCARNA20.4-201ENST00000516969 PRR27Q6MZM9 219 aa4.11□□□□□ -1.75
SCARNA20.4-201ENST00000516969 RASL11AQ6T310 242 aa4.11□□□□□ -1.75
SCARNA20.4-201ENST00000516969 C18orf65Q6ZTR6 163 aa4.11□□□□□ -1.75
SCARNA20.4-201ENST00000516969 ZNF575Q86XF7 245 aa4.11□□□□□ -1.75
SCARNA20.4-201ENST00000516969 GBGT1Q8N5D6 347 aa4.11□□□□□ -1.75
SCARNA20.4-201ENST00000516969 RNF182Q8N6D2 247 aa4.11□□□□□ -1.75
SCARNA20.4-201ENST00000516969 NUP35Q8NFH5 326 aa4.11□□□□□ -1.75
SCARNA20.4-201ENST00000516969 C4orf3Q8WVX3 66 aa4.11□□□□□ -1.75
SCARNA20.4-201ENST00000516969 GTSF1Q8WW33 167 aa4.11□□□□□ -1.75
SCARNA20.4-201ENST00000516969 DAZAP1Q96EP5 407 aaKnown RBP4.11□□□□□ -1.75
SCARNA20.4-201ENST00000516969 SMR3AQ99954 134 aa4.11□□□□□ -1.75
SCARNA20.4-201ENST00000516969 GNB1LQ9BYB4 327 aa4.11□□□□□ -1.75
SCARNA20.4-201ENST00000516969 AGPAT4-IT1Q9H0P7 198 aa4.11□□□□□ -1.75
SCARNA20.4-201ENST00000516969 RPP21Q9H633 154 aaKnown RBP4.11□□□□□ -1.75
SCARNA20.4-201ENST00000516969 NRN1Q9NPD7 142 aa4.11□□□□□ -1.75
SCARNA20.4-201ENST00000516969 NAT8BQ9UHF3 227 aa4.11□□□□□ -1.75
SCARNA20.4-201ENST00000516969 F8P00451 2351 aa4.11□□□□□ -1.75
SCARNA20.4-201ENST00000516969 A0A1B0GXF2 115 aa4.1□□□□□ -1.75
SCARNA20.4-201ENST00000516969 HIGD1CA8MV81 97 aa4.1□□□□□ -1.75
SCARNA20.4-201ENST00000516969 S100A6P06703 90 aa4.1□□□□□ -1.75
SCARNA20.4-201ENST00000516969 FOSL1P15407 271 aa4.1□□□□□ -1.75
SCARNA20.4-201ENST00000516969 SRD5A1P18405 259 aa4.1□□□□□ -1.75
SCARNA20.4-201ENST00000516969 EDN2P20800 178 aa4.1□□□□□ -1.75
SCARNA20.4-201ENST00000516969 BMI1P35226 326 aa4.1□□□□□ -1.75
SCARNA20.4-201ENST00000516969 TCL1AP56279 114 aa4.1□□□□□ -1.75
SCARNA20.4-201ENST00000516969 SYNJ2BPP57105 145 aa4.1□□□□□ -1.75
SCARNA20.4-201ENST00000516969 RPL19P84098 196 aaKnown RBP4.1□□□□□ -1.75
SCARNA20.4-201ENST00000516969 SRSF2Q01130 221 aaKnown RBP4.1□□□□□ -1.75
SCARNA20.4-201ENST00000516969 FABP9Q0Z7S8 132 aa4.1□□□□□ -1.75
SCARNA20.4-201ENST00000516969 ERCC8Q13216 396 aa4.1□□□□□ -1.75
SCARNA20.4-201ENST00000516969 COA6Q5JTJ3 125 aaKnown RBP4.1□□□□□ -1.75
SCARNA20.4-201ENST00000516969 FAM162BQ5T6X4 162 aa4.1□□□□□ -1.75
SCARNA20.4-201ENST00000516969 SAMD13Q5VXD3 122 aa4.1□□□□□ -1.75
SCARNA20.4-201ENST00000516969 ADAMTSL5Q6ZMM2 481 aa4.1□□□□□ -1.75
SCARNA20.4-201ENST00000516969 TMEM136Q6ZRR5 245 aa4.1□□□□□ -1.75
SCARNA20.4-201ENST00000516969 ZNF418Q8TF45 676 aaPredicted RBP4.1□□□□□ -1.75
SCARNA20.4-201ENST00000516969 DCANP1Q8TF63 244 aa4.1□□□□□ -1.75
SCARNA20.4-201ENST00000516969 C16orf92Q96LL3 132 aa4.1□□□□□ -1.75
SCARNA20.4-201ENST00000516969 LINC00477Q96M19 166 aa4.1□□□□□ -1.75
SCARNA20.4-201ENST00000516969 NEU1Q99519 415 aa4.1□□□□□ -1.75
SCARNA20.4-201ENST00000516969 ASCL2Q99929 193 aa4.1□□□□□ -1.75
SCARNA20.4-201ENST00000516969 GPR61Q9BZJ8 451 aa4.1□□□□□ -1.75
SCARNA20.4-201ENST00000516969 SAV1Q9H4B6 383 aaPredicted RBP4.1□□□□□ -1.75
SCARNA20.4-201ENST00000516969 LENEPQ9Y5L5 61 aa4.1□□□□□ -1.75
SCARNA20.4-201ENST00000516969 TRAPPC1Q9Y5R8 145 aa4.1□□□□□ -1.75
SCARNA20.4-201ENST00000516969 TRBV7-9A0A0J9YWB2 115 aa4.09□□□□□ -1.75
SCARNA20.4-201ENST00000516969 C2orf70A6NJV1 201 aa4.09□□□□□ -1.75
SCARNA20.4-201ENST00000516969 LINC01619G3V211 115 aa4.09□□□□□ -1.75
SCARNA20.4-201ENST00000516969 OVOL1O14753 267 aa4.09□□□□□ -1.75
SCARNA20.4-201ENST00000516969 SH2D1AO60880 128 aa4.09□□□□□ -1.75
SCARNA20.4-201ENST00000516969 NDUFA7O95182 113 aa4.09□□□□□ -1.75
SCARNA20.4-201ENST00000516969 MT-ND6P03923 174 aa4.09□□□□□ -1.75
SCARNA20.4-201ENST00000516969 CT45A10P0DMU9 189 aa4.09□□□□□ -1.75
SCARNA20.4-201ENST00000516969 CBLN1P23435 193 aa4.09□□□□□ -1.75
SCARNA20.4-201ENST00000516969 ZNF80P51504 273 aaPredicted RBP4.09□□□□□ -1.75
SCARNA20.4-201ENST00000516969 ZNF138P52744 262 aa4.09□□□□□ -1.75
SCARNA20.4-201ENST00000516969 NDUFA6P56556 154 aa4.09□□□□□ -1.75
SCARNA20.4-201ENST00000516969 SMUG1Q53HV7 270 aa4.09□□□□□ -1.75
SCARNA20.4-201ENST00000516969 GDF5OSQ5U4N7 250 aa4.09□□□□□ -1.75
SCARNA20.4-201ENST00000516969 WDR73Q6P4I2 378 aa4.09□□□□□ -1.75
SCARNA20.4-201ENST00000516969 RBPMS2Q6ZRY4 209 aaKnown RBP4.09□□□□□ -1.75
SCARNA20.4-201ENST00000516969 TCF24Q7RTU0 167 aa4.09□□□□□ -1.75
SCARNA20.4-201ENST00000516969 ATP5L2Q7Z4Y8 100 aa4.09□□□□□ -1.75
SCARNA20.4-201ENST00000516969 OR2D3Q8NGH3 330 aa4.09□□□□□ -1.75
SCARNA20.4-201ENST00000516969 OR1N2Q8NGR9 330 aa4.09□□□□□ -1.75
SCARNA20.4-201ENST00000516969 LINC01006Q8NI28 216 aa4.09□□□□□ -1.75
SCARNA20.4-201ENST00000516969 Q8TAT8 98 aa4.09□□□□□ -1.75
SCARNA20.4-201ENST00000516969 FAM19A4Q96LR4 140 aa4.09□□□□□ -1.75
SCARNA20.4-201ENST00000516969 MRPL18Q9H0U6 180 aaKnown RBP4.09□□□□□ -1.75
SCARNA20.4-201ENST00000516969 IFITM10A6NMD0 228 aa4.08□□□□□ -1.76
SCARNA20.4-201ENST00000516969 FABP5P3A8MUU1 101 aa4.08□□□□□ -1.76
SCARNA20.4-201ENST00000516969 SNURFLB1AK76 121 aa4.08□□□□□ -1.76
SCARNA20.4-201ENST00000516969 K7EQG2 157 aa4.08□□□□□ -1.76
SCARNA20.4-201ENST00000516969 HAX1O00165 279 aa4.08□□□□□ -1.76
SCARNA20.4-201ENST00000516969 SPINK4O60575 86 aa4.08□□□□□ -1.76
SCARNA20.4-201ENST00000516969 HLA-DQA1P01909 254 aa4.08□□□□□ -1.76
SCARNA20.4-201ENST00000516969 CSN3P07498 182 aa4.08□□□□□ -1.76
SCARNA20.4-201ENST00000516969 GZMBP10144 247 aa4.08□□□□□ -1.76
SCARNA20.4-201ENST00000516969 ID1P41134 155 aa4.08□□□□□ -1.76
SCARNA20.4-201ENST00000516969 SLURP1P55000 103 aa4.08□□□□□ -1.76
SCARNA20.4-201ENST00000516969 RPL11P62913 178 aaKnown RBP4.08□□□□□ -1.76
SCARNA20.4-201ENST00000516969 HIST1H1AQ02539 215 aaPredicted RBP4.08□□□□□ -1.76
SCARNA20.4-201ENST00000516969 DEFB136Q30KP8 78 aa4.08□□□□□ -1.76
SCARNA20.4-201ENST00000516969 TMEM78Q5T7P6 136 aa4.08□□□□□ -1.76
SCARNA20.4-201ENST00000516969 GFI1BQ5VTD9 330 aa4.08□□□□□ -1.76
SCARNA20.4-201ENST00000516969 MRPL54Q6P161 138 aaKnown RBP4.08□□□□□ -1.76
SCARNA20.4-201ENST00000516969 ZNF738Q8NE65 137 aa4.08□□□□□ -1.76
SCARNA20.4-201ENST00000516969 OR11H1Q8NG94 326 aa4.08□□□□□ -1.76
SCARNA20.4-201ENST00000516969 OR8A1Q8NGG7 326 aa4.08□□□□□ -1.76
SCARNA20.4-201ENST00000516969 PGLYRP4Q96LB8 373 aa4.08□□□□□ -1.76
SCARNA20.4-201ENST00000516969 JMJD8Q96S16 334 aa4.08□□□□□ -1.76
SCARNA20.4-201ENST00000516969 NDFIP1Q9BT67 221 aa4.08□□□□□ -1.76
SCARNA20.4-201ENST00000516969 MS4A6AQ9H2W1 248 aa4.08□□□□□ -1.76
SCARNA20.4-201ENST00000516969 NOTCH3Q9UM47 2321 aa4.08□□□□□ -1.76
SCARNA20.4-201ENST00000516969 MUC4Q99102 2169 aa4.07□□□□□ -1.76
SCARNA20.4-201ENST00000516969 TRAV2A0A0B4J234 112 aa4.07□□□□□ -1.76
SCARNA20.4-201ENST00000516969 A0A1B0GUT8 65 aa4.07□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 318.8 ms