RNA–Protein interactions for RNA: ENST00000516956.1

SCARNA16.4-201, small Cajal body-specific RNA 16, humanhuman

BASIC

Gene SCARNA16, Length 187 nt, Biotype scaRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA16.4-201ENST00000516956 VAX2Q9UIW0 290 aa4.03□□□□□ -1.76
SCARNA16.4-201ENST00000516956 EPDR1Q9UM22 224 aa4.03□□□□□ -1.76
SCARNA16.4-201ENST00000516956 RBMY1BA6NDE4 496 aaKnown RBP4.02□□□□□ -1.77
SCARNA16.4-201ENST00000516956 RBMY1EA6NEQ0 496 aaKnown RBP4.02□□□□□ -1.77
SCARNA16.4-201ENST00000516956 RBFOX3A6NFN3 312 aa4.02□□□□□ -1.77
SCARNA16.4-201ENST00000516956 PRAC2D3DTV9 90 aa4.02□□□□□ -1.77
SCARNA16.4-201ENST00000516956 SPRY2O43597 315 aa4.02□□□□□ -1.77
SCARNA16.4-201ENST00000516956 TCRAP04437 139 aa4.02□□□□□ -1.77
SCARNA16.4-201ENST00000516956 RBMY1DP0C7P1 496 aaKnown RBP4.02□□□□□ -1.77
SCARNA16.4-201ENST00000516956 CT45A10P0DMU9 189 aa4.02□□□□□ -1.77
SCARNA16.4-201ENST00000516956 BCL2P10415 239 aa4.02□□□□□ -1.77
SCARNA16.4-201ENST00000516956 RNASE4P34096 147 aaKnown RBP4.02□□□□□ -1.77
SCARNA16.4-201ENST00000516956 DEFB1P60022 68 aa4.02□□□□□ -1.77
SCARNA16.4-201ENST00000516956 GNG5P63218 68 aa4.02□□□□□ -1.77
SCARNA16.4-201ENST00000516956 FLI1Q01543 452 aaPredicted RBP4.02□□□□□ -1.77
SCARNA16.4-201ENST00000516956 MEF2BQ02080 365 aaPredicted RBP4.02□□□□□ -1.77
SCARNA16.4-201ENST00000516956 PEA15Q15121 130 aa4.02□□□□□ -1.77
SCARNA16.4-201ENST00000516956 SPINK13Q1W4C9 94 aa4.02□□□□□ -1.77
SCARNA16.4-201ENST00000516956 DEFB135Q30KP9 77 aa4.02□□□□□ -1.77
SCARNA16.4-201ENST00000516956 GDF5OSQ5U4N7 250 aa4.02□□□□□ -1.77
SCARNA16.4-201ENST00000516956 Q6ZWC4 215 aa4.02□□□□□ -1.77
SCARNA16.4-201ENST00000516956 PRNTQ86SH4 94 aa4.02□□□□□ -1.77
SCARNA16.4-201ENST00000516956 FMC1Q96HJ9 113 aa4.02□□□□□ -1.77
SCARNA16.4-201ENST00000516956 CITED4Q96RK1 184 aa4.02□□□□□ -1.77
SCARNA16.4-201ENST00000516956 LINC01587Q99440 93 aa4.02□□□□□ -1.77
SCARNA16.4-201ENST00000516956 AGPAT4-IT1Q9H0P7 198 aa4.02□□□□□ -1.77
SCARNA16.4-201ENST00000516956 MED9Q9NWA0 146 aa4.02□□□□□ -1.77
SCARNA16.4-201ENST00000516956 PLA2G2EQ9NZK7 142 aa4.02□□□□□ -1.77
SCARNA16.4-201ENST00000516956 PSG8Q9UQ74 426 aa4.02□□□□□ -1.77
SCARNA16.4-201ENST00000516956 YTHDF2Q9Y5A9 579 aaKnown RBP4.02□□□□□ -1.77
SCARNA16.4-201ENST00000516956 LENEPQ9Y5L5 61 aa4.02□□□□□ -1.77
SCARNA16.4-201ENST00000516956 NOTCH1P46531 2555 aa4.02□□□□□ -1.77
SCARNA16.4-201ENST00000516956 TRBV7-9A0A0J9YWB2 115 aa4.01□□□□□ -1.77
SCARNA16.4-201ENST00000516956 GGTLC3B5MD39 225 aa4.01□□□□□ -1.77
SCARNA16.4-201ENST00000516956 M0R2Z0 102 aa4.01□□□□□ -1.77
SCARNA16.4-201ENST00000516956 RGS13O14921 159 aa4.01□□□□□ -1.77
SCARNA16.4-201ENST00000516956 NMBP08949 121 aa4.01□□□□□ -1.77
SCARNA16.4-201ENST00000516956 PRB4P10163 310 aaPredicted RBP4.01□□□□□ -1.77
SCARNA16.4-201ENST00000516956 HTN1P15515 57 aa4.01□□□□□ -1.77
SCARNA16.4-201ENST00000516956 ATP5G3P48201 142 aa4.01□□□□□ -1.77
SCARNA16.4-201ENST00000516956 CCL20P78556 96 aa4.01□□□□□ -1.77
SCARNA16.4-201ENST00000516956 ZNF674Q2M3X9 581 aa4.01□□□□□ -1.77
SCARNA16.4-201ENST00000516956 SMUG1Q53HV7 270 aa4.01□□□□□ -1.77
SCARNA16.4-201ENST00000516956 TOR2AQ5JU69 321 aa4.01□□□□□ -1.77
SCARNA16.4-201ENST00000516956 C9orf47Q6ZRZ4 202 aa4.01□□□□□ -1.77
SCARNA16.4-201ENST00000516956 SBSPONQ8IVN8 264 aa4.01□□□□□ -1.77
SCARNA16.4-201ENST00000516956 TMEM256Q8N2U0 113 aa4.01□□□□□ -1.77
SCARNA16.4-201ENST00000516956 TMEM75Q8N9X5 138 aa4.01□□□□□ -1.77
SCARNA16.4-201ENST00000516956 OR11H2Q8NH07 326 aa4.01□□□□□ -1.77
SCARNA16.4-201ENST00000516956 DAZAP1Q96EP5 407 aaKnown RBP4.01□□□□□ -1.77
SCARNA16.4-201ENST00000516956 SGK494Q96LW2 274 aa4.01□□□□□ -1.77
SCARNA16.4-201ENST00000516956 IGF2BP2-AS1Q96M15 143 aa4.01□□□□□ -1.77
SCARNA16.4-201ENST00000516956 ODF3Q96PU9 254 aa4.01□□□□□ -1.77
SCARNA16.4-201ENST00000516956 RARRES2Q99969 163 aa4.01□□□□□ -1.77
SCARNA16.4-201ENST00000516956 VGLL1Q99990 258 aa4.01□□□□□ -1.77
SCARNA16.4-201ENST00000516956 C20orf144Q9BQM9 153 aa4.01□□□□□ -1.77
SCARNA16.4-201ENST00000516956 SLC35B3Q9H1N7 401 aa4.01□□□□□ -1.77
SCARNA16.4-201ENST00000516956 TREM1Q9NP99 234 aa4.01□□□□□ -1.77
SCARNA16.4-201ENST00000516956 BIN3Q9NQY0 253 aa4.01□□□□□ -1.77
SCARNA16.4-201ENST00000516956 ZNF492Q9P255 531 aa4.01□□□□□ -1.77
SCARNA16.4-201ENST00000516956 TP53TG1Q9Y2A0 90 aa4.01□□□□□ -1.77
SCARNA16.4-201ENST00000516956 ZFP30Q9Y2G7 519 aa4.01□□□□□ -1.77
SCARNA16.4-201ENST00000516956 SORL1Q92673 2214 aa4.01□□□□□ -1.77
SCARNA16.4-201ENST00000516956 ANK2Q01484 3957 aa4□□□□□ -1.77
SCARNA16.4-201ENST00000516956 TRAV12-2A0A075B6T6 113 aa4□□□□□ -1.77
SCARNA16.4-201ENST00000516956 TRAV12-3A0A0B4J271 114 aa4□□□□□ -1.77
SCARNA16.4-201ENST00000516956 TRAV34A0A0B4J273 112 aa4□□□□□ -1.77
SCARNA16.4-201ENST00000516956 TRAV21A0A0B4J279 112 aa4□□□□□ -1.77
SCARNA16.4-201ENST00000516956 LOC102723971A0A1B0GUV8 181 aa4□□□□□ -1.77
SCARNA16.4-201ENST00000516956 SCO2A0A1W2PP80 73 aa4□□□□□ -1.77
SCARNA16.4-201ENST00000516956 C7orf71A4D174 169 aa4□□□□□ -1.77
SCARNA16.4-201ENST00000516956 SMIM9A6NGZ8 99 aa4□□□□□ -1.77
SCARNA16.4-201ENST00000516956 H7BYZ3 331 aa4□□□□□ -1.77
SCARNA16.4-201ENST00000516956 MGST1P10620 155 aaKnown RBP4□□□□□ -1.77
SCARNA16.4-201ENST00000516956 GNG4P50150 75 aa4□□□□□ -1.77
SCARNA16.4-201ENST00000516956 TAS2R60P59551 318 aa4□□□□□ -1.77
SCARNA16.4-201ENST00000516956 PMS2P11Q13670 270 aa4□□□□□ -1.77
SCARNA16.4-201ENST00000516956 RRN3P1Q2M238 152 aa4□□□□□ -1.77
SCARNA16.4-201ENST00000516956 FAM159AQ6UWV7 190 aa4□□□□□ -1.77
SCARNA16.4-201ENST00000516956 LINC00322Q6ZN03 302 aaPredicted RBP4□□□□□ -1.77
SCARNA16.4-201ENST00000516956 BAGE2Q86Y30 109 aa4□□□□□ -1.77
SCARNA16.4-201ENST00000516956 Q8TAT8 98 aa4□□□□□ -1.77
SCARNA16.4-201ENST00000516956 PCNPQ8WW12 178 aaKnown RBP4□□□□□ -1.77
SCARNA16.4-201ENST00000516956 RNF183Q96D59 192 aa4□□□□□ -1.77
SCARNA16.4-201ENST00000516956 NAGKQ9UJ70 344 aa4□□□□□ -1.77
SCARNA16.4-201ENST00000516956 FBN3Q75N90 2809 aa3.99□□□□□ -1.77
SCARNA16.4-201ENST00000516956 TRAV8-1A0A0A6YYK1 113 aa3.99□□□□□ -1.77
SCARNA16.4-201ENST00000516956 TMEM189A5PLL7 270 aa3.99□□□□□ -1.77
SCARNA16.4-201ENST00000516956 CBY3A6NI87 242 aa3.99□□□□□ -1.77
SCARNA16.4-201ENST00000516956 FABP5P3A8MUU1 101 aa3.99□□□□□ -1.77
SCARNA16.4-201ENST00000516956 SNURFLB1AK76 121 aa3.99□□□□□ -1.77
SCARNA16.4-201ENST00000516956 TMEM250H0YL14 139 aa3.99□□□□□ -1.77
SCARNA16.4-201ENST00000516956 GCGP01275 180 aa3.99□□□□□ -1.77
SCARNA16.4-201ENST00000516956 MIFP14174 115 aa3.99□□□□□ -1.77
SCARNA16.4-201ENST00000516956 S100A4P26447 101 aaKnown RBP3.99□□□□□ -1.77
SCARNA16.4-201ENST00000516956 TMEM183BQ1AE95 376 aa3.99□□□□□ -1.77
SCARNA16.4-201ENST00000516956 ZNF506Q5JVG8 444 aa3.99□□□□□ -1.77
SCARNA16.4-201ENST00000516956 CLLU1Q5K131 121 aa3.99□□□□□ -1.77
SCARNA16.4-201ENST00000516956 GFI1BQ5VTD9 330 aa3.99□□□□□ -1.77
SCARNA16.4-201ENST00000516956 AMTNQ6UX39 209 aa3.99□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 92.4 ms