RNA–Protein interactions for RNA: ENST00000515459.5

LMNA-223, Transcript of lamin A/C, human

TSL 5

Gene LMNA, Length 757 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LMNA-223	ENST00000515459	MRPL53	Q96EL3	112 aa	Known RBP	10.67	□□□□□ -0.7
LMNA-223	ENST00000515459	FAM19A4	Q96LR4	140 aa		10.67	□□□□□ -0.7
LMNA-223	ENST00000515459	LINC00477	Q96M19	166 aa		10.67	□□□□□ -0.7
LMNA-223	ENST00000515459	VGLL1	Q99990	258 aa		10.67	□□□□□ -0.7
LMNA-223	ENST00000515459	SRRM2	Q9UQ35	2752 aa	Known RBP	10.67	□□□□□ -0.7
LMNA-223	ENST00000515459		M0R3E3	92 aa		10.66	□□□□□ -0.7
LMNA-223	ENST00000515459	GPX1	P07203	203 aa		10.66	□□□□□ -0.7
LMNA-223	ENST00000515459	EVI2A	P22794	236 aa		10.66	□□□□□ -0.7
LMNA-223	ENST00000515459	CAMLG	P49069	296 aa		10.66	□□□□□ -0.7
LMNA-223	ENST00000515459	RAB31	Q13636	194 aa		10.66	□□□□□ -0.7
LMNA-223	ENST00000515459	FHL2	Q14192	279 aa		10.66	□□□□□ -0.7
LMNA-223	ENST00000515459	IAH1	Q2TAA2	248 aa	Predicted RBP	10.66	□□□□□ -0.7
LMNA-223	ENST00000515459	C8orf49	Q96NF6	230 aa		10.66	□□□□□ -0.7
LMNA-223	ENST00000515459	MRPL16	Q9NX20	251 aa	Known RBP	10.66	□□□□□ -0.7
LMNA-223	ENST00000515459	RCL1	Q9Y2P8	373 aa	Known RBP	10.66	□□□□□ -0.7
LMNA-223	ENST00000515459		V9GYH0	126 aa		10.66	□□□□□ -0.7
LMNA-223	ENST00000515459		J3QL48	77 aa		10.65	□□□□□ -0.7
LMNA-223	ENST00000515459	RGS13	O14921	159 aa		10.65	□□□□□ -0.7
LMNA-223	ENST00000515459	HAMP	P81172	84 aa		10.65	□□□□□ -0.7
LMNA-223	ENST00000515459	WFDC10B	Q8IUB3	73 aa		10.65	□□□□□ -0.7
LMNA-223	ENST00000515459	OR1L4	Q8NGR5	311 aa		10.65	□□□□□ -0.7
LMNA-223	ENST00000515459	PFDN5	Q99471	154 aa		10.65	□□□□□ -0.7
LMNA-223	ENST00000515459	AGPAT4-IT1	Q9H0P7	198 aa		10.65	□□□□□ -0.7
LMNA-223	ENST00000515459	TP53TG3	Q9ULZ0	132 aa		10.65	□□□□□ -0.7
LMNA-223	ENST00000515459	TRBV19	A0A075B6N1	114 aa		10.64	□□□□□ -0.71
LMNA-223	ENST00000515459	C7orf66	A4D0T2	115 aa		10.64	□□□□□ -0.71
LMNA-223	ENST00000515459	NOL3	O60936	208 aa	Known RBP	10.64	□□□□□ -0.71
LMNA-223	ENST00000515459	CRISP2	P16562	243 aa		10.64	□□□□□ -0.71
LMNA-223	ENST00000515459	SRI	P30626	198 aa		10.64	□□□□□ -0.71
LMNA-223	ENST00000515459	MIC13	Q5XKP0	118 aa		10.64	□□□□□ -0.71
LMNA-223	ENST00000515459	NRARP	Q7Z6K4	114 aa		10.64	□□□□□ -0.71
LMNA-223	ENST00000515459	TMEM70	Q9BUB7	260 aa		10.64	□□□□□ -0.71
LMNA-223	ENST00000515459	MRPL32	Q9BYC8	188 aa	Known RBP	10.64	□□□□□ -0.71
LMNA-223	ENST00000515459	GSKIP	Q9P0R6	139 aa		10.64	□□□□□ -0.71
LMNA-223	ENST00000515459	PRELID1	Q9Y255	219 aa		10.64	□□□□□ -0.71
LMNA-223	ENST00000515459	IGLV5-52	A0A0A0MRZ9	124 aa		10.63	□□□□□ -0.71
LMNA-223	ENST00000515459		E5RGE8	158 aa		10.63	□□□□□ -0.71
LMNA-223	ENST00000515459		H3BMQ9	156 aa		10.63	□□□□□ -0.71
LMNA-223	ENST00000515459		K7EQD1	137 aa		10.63	□□□□□ -0.71
LMNA-223	ENST00000515459	NDUFB6	O95139	128 aa		10.63	□□□□□ -0.71
LMNA-223	ENST00000515459	NMB	P08949	121 aa		10.63	□□□□□ -0.71
LMNA-223	ENST00000515459	C12orf45	Q8N5I9	185 aa	Predicted RBP	10.63	□□□□□ -0.71
LMNA-223	ENST00000515459	ARPC5L	Q9BPX5	153 aa		10.63	□□□□□ -0.71
LMNA-223	ENST00000515459	IGHV1OR15-1	A0A075B7D0	117 aa		10.62	□□□□□ -0.71
LMNA-223	ENST00000515459	TRGV4	A0A0C4DH28	118 aa		10.62	□□□□□ -0.71
LMNA-223	ENST00000515459	MBP	P02686	304 aa	Predicted RBP	10.62	□□□□□ -0.71
LMNA-223	ENST00000515459	PDE6H	Q13956	83 aa		10.62	□□□□□ -0.71
LMNA-223	ENST00000515459	C9orf47	Q6ZRZ4	202 aa		10.62	□□□□□ -0.71
LMNA-223	ENST00000515459	C10orf126	Q8N4M7	172 aa		10.62	□□□□□ -0.71
LMNA-223	ENST00000515459	PCNP	Q8WW12	178 aa	Known RBP	10.62	□□□□□ -0.71
LMNA-223	ENST00000515459	FLVCR2	Q9UPI3	526 aa		10.62	□□□□□ -0.71
LMNA-223	ENST00000515459	TIMM9	Q9Y5J7	89 aa		10.62	□□□□□ -0.71
LMNA-223	ENST00000515459		L7N2F9	121 aa		10.61	□□□□□ -0.71
LMNA-223	ENST00000515459	PSCA	O43653	123 aa		10.61	□□□□□ -0.71
LMNA-223	ENST00000515459	NDUFB4	O95168	129 aa		10.61	□□□□□ -0.71
LMNA-223	ENST00000515459	CRYGD	P07320	174 aa		10.61	□□□□□ -0.71
LMNA-223	ENST00000515459	HIST1H1E	P10412	219 aa	Known RBP	10.61	□□□□□ -0.71
LMNA-223	ENST00000515459	S100A5	P33763	92 aa		10.61	□□□□□ -0.71
LMNA-223	ENST00000515459	VAMP2	P63027	116 aa		10.61	□□□□□ -0.71
LMNA-223	ENST00000515459	ZNF415	Q09FC8	603 aa		10.61	□□□□□ -0.71
LMNA-223	ENST00000515459	EXOC3-AS1	Q8N2X6	119 aa		10.61	□□□□□ -0.71
LMNA-223	ENST00000515459	ZFAND2A	Q8N6M9	145 aa		10.61	□□□□□ -0.71
LMNA-223	ENST00000515459	NTN5	Q8WTR8	489 aa	Predicted RBP	10.61	□□□□□ -0.71
LMNA-223	ENST00000515459	SRR	Q9GZT4	340 aa		10.61	□□□□□ -0.71
LMNA-223	ENST00000515459	AAMDC	Q9H7C9	122 aa		10.61	□□□□□ -0.71
LMNA-223	ENST00000515459	SLC39A9	Q9NUM3	307 aa		10.61	□□□□□ -0.71
LMNA-223	ENST00000515459	TMEM14C	Q9P0S9	112 aa		10.61	□□□□□ -0.71
LMNA-223	ENST00000515459	NAP1L6	A6NFF2	107 aa		10.6	□□□□□ -0.71
LMNA-223	ENST00000515459	ORM1	P02763	201 aa		10.6	□□□□□ -0.71
LMNA-223	ENST00000515459	GYPE	P15421	78 aa		10.6	□□□□□ -0.71
LMNA-223	ENST00000515459	RPL29	P47914	159 aa	Known RBP	10.6	□□□□□ -0.71
LMNA-223	ENST00000515459	TMEM78	Q5T7P6	136 aa		10.6	□□□□□ -0.71
LMNA-223	ENST00000515459	PRR9	Q5T870	116 aa		10.6	□□□□□ -0.71
LMNA-223	ENST00000515459		Q6ZQT7	251 aa		10.6	□□□□□ -0.71
LMNA-223	ENST00000515459	IQCF2	Q8IXL9	164 aa		10.6	□□□□□ -0.71
LMNA-223	ENST00000515459	UQCC1	Q9NVA1	299 aa		10.6	□□□□□ -0.71
LMNA-223	ENST00000515459	WDR83OS	Q9Y284	106 aa		10.6	□□□□□ -0.71
LMNA-223	ENST00000515459	IGKV2-40	A0A087WW87	121 aa	Predicted RBP	10.59	□□□□□ -0.71
LMNA-223	ENST00000515459	IGKV2D-40	P01614	121 aa	Predicted RBP	10.59	□□□□□ -0.71
LMNA-223	ENST00000515459	SFTA3	P0C7M3	94 aa		10.59	□□□□□ -0.71
LMNA-223	ENST00000515459	INPP1	P49441	399 aa		10.59	□□□□□ -0.71
LMNA-223	ENST00000515459	BCAP31	P51572	246 aa		10.59	□□□□□ -0.71
LMNA-223	ENST00000515459	CAV2	P51636	162 aa		10.59	□□□□□ -0.71
LMNA-223	ENST00000515459	BLNK	Q8WV28	456 aa		10.59	□□□□□ -0.71
LMNA-223	ENST00000515459	ZNF479	Q96JC4	524 aa		10.59	□□□□□ -0.71
LMNA-223	ENST00000515459	TXNDC17	Q9BRA2	123 aa		10.59	□□□□□ -0.71
LMNA-223	ENST00000515459	C20orf85	Q9H1P6	137 aa		10.59	□□□□□ -0.71
LMNA-223	ENST00000515459	LRCOL1	A6NCL2	159 aa		10.58	□□□□□ -0.72
LMNA-223	ENST00000515459	CST7	O76096	145 aa		10.58	□□□□□ -0.72
LMNA-223	ENST00000515459	PYY	P10082	97 aa		10.58	□□□□□ -0.72
LMNA-223	ENST00000515459	BAX	Q07812	192 aa		10.58	□□□□□ -0.72
LMNA-223	ENST00000515459	MITD1	Q8WV92	249 aa		10.58	□□□□□ -0.72
LMNA-223	ENST00000515459	ZNF492	Q9P255	531 aa		10.58	□□□□□ -0.72
LMNA-223	ENST00000515459	UBE2L5P	A0A1B0GUS4	154 aa		10.57	□□□□□ -0.72
LMNA-223	ENST00000515459		C9JCJ5	164 aa		10.57	□□□□□ -0.72
LMNA-223	ENST00000515459	ZNF846	Q147U1	533 aa		10.57	□□□□□ -0.72
LMNA-223	ENST00000515459	VWC2	Q2TAL6	325 aa		10.57	□□□□□ -0.72
LMNA-223	ENST00000515459	FAM122C	Q6P4D5	195 aa		10.57	□□□□□ -0.72
LMNA-223	ENST00000515459	OR10G4	Q8NGN3	311 aa		10.57	□□□□□ -0.72
LMNA-223	ENST00000515459	LSM5	Q9Y4Y9	91 aa	Known RBP	10.57	□□□□□ -0.72

Retrieved 100 of 20,778 RNA–protein pairs in 64.8 ms