RNA–Protein interactions for RNA: ENST00000515144.5

TRIO-222, Transcript of trio Rho guanine nucleotide exchange factor, humanhuman

TSL 1 (best)

Gene TRIO, Length 7,455 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIO-222ENST00000515144 FBLN5Q9UBX5 448 aa11.49□□□□□ -0.57
TRIO-222ENST00000515144 IGKCP01834 107 aa11.49□□□□□ -0.57
TRIO-222ENST00000515144 ARTNQ5T4W7 220 aa11.49□□□□□ -0.57
TRIO-222ENST00000515144 BLCAPP62952 87 aa11.49□□□□□ -0.57
TRIO-222ENST00000515144 WISP2O76076 250 aa11.49□□□□□ -0.57
TRIO-222ENST00000515144 NMSQ5H8A3 153 aa11.49□□□□□ -0.57
TRIO-222ENST00000515144 NUP35Q8NFH5 326 aa11.49□□□□□ -0.57
TRIO-222ENST00000515144 ARMS2P0C7Q2 107 aa11.48□□□□□ -0.57
TRIO-222ENST00000515144 IFITM2Q01629 132 aa11.48□□□□□ -0.57
TRIO-222ENST00000515144 HIST2H2BDQ6DRA6 164 aa11.48□□□□□ -0.57
TRIO-222ENST00000515144 IGKV1-39P01597 117 aa11.48□□□□□ -0.57
TRIO-222ENST00000515144 IGKV1D-39P04432 117 aa11.48□□□□□ -0.57
TRIO-222ENST00000515144 ZNF134P52741 427 aa11.48□□□□□ -0.57
TRIO-222ENST00000515144 AMN1Q8IY45 258 aa11.48□□□□□ -0.57
TRIO-222ENST00000515144 TSKUQ8WUA8 353 aa11.48□□□□□ -0.57
TRIO-222ENST00000515144 ANXA2RQ3ZCQ2 193 aa11.48□□□□□ -0.57
TRIO-222ENST00000515144 TTC32Q5I0X7 151 aa11.48□□□□□ -0.57
TRIO-222ENST00000515144 Q8TCH9 128 aa11.48□□□□□ -0.57
TRIO-222ENST00000515144 TMEM14BQ9NUH8 114 aa11.48□□□□□ -0.57
TRIO-222ENST00000515144 IGKV1-6A0A0C4DH72 117 aa11.48□□□□□ -0.57
TRIO-222ENST00000515144 MPZP25189 248 aa11.47□□□□□ -0.57
TRIO-222ENST00000515144 TRAV26-2A0A0B4J265 109 aa11.47□□□□□ -0.57
TRIO-222ENST00000515144 A8MXK9 166 aa11.47□□□□□ -0.57
TRIO-222ENST00000515144 SRSF2Q01130 221 aaKnown RBP11.47□□□□□ -0.57
TRIO-222ENST00000515144 ANGP03950 147 aaKnown RBP11.47□□□□□ -0.57
TRIO-222ENST00000515144 RNASE13Q5GAN3 156 aaKnown RBP11.47□□□□□ -0.57
TRIO-222ENST00000515144 LHFPL1Q86WI0 220 aa11.47□□□□□ -0.57
TRIO-222ENST00000515144 MS4A6AQ9H2W1 248 aa11.47□□□□□ -0.57
TRIO-222ENST00000515144 DEFB4AO15263 64 aa11.47□□□□□ -0.57
TRIO-222ENST00000515144 ABCA2Q9BZC7 2435 aa11.46□□□□□ -0.57
TRIO-222ENST00000515144 OSTCQ9NRP0 149 aa11.46□□□□□ -0.57
TRIO-222ENST00000515144 CTSZQ9UBR2 303 aa11.46□□□□□ -0.57
TRIO-222ENST00000515144 NHP2Q9NX24 153 aaKnown RBP11.46□□□□□ -0.57
TRIO-222ENST00000515144 IGKV1OR2-108A0A075B7D4 117 aa11.46□□□□□ -0.57
TRIO-222ENST00000515144 ZNRF2Q8NHG8 242 aa11.46□□□□□ -0.57
TRIO-222ENST00000515144 PARD6GQ9BYG4 376 aaPredicted RBP11.46□□□□□ -0.57
TRIO-222ENST00000515144 KLF2Q9Y5W3 355 aaPredicted RBP11.46□□□□□ -0.57
TRIO-222ENST00000515144 PLNP26678 52 aa11.46□□□□□ -0.58
TRIO-222ENST00000515144 FHL1Q13642 323 aa11.46□□□□□ -0.58
TRIO-222ENST00000515144 Q6ZQT7 251 aa11.46□□□□□ -0.58
TRIO-222ENST00000515144 FOXL2NBQ6ZUU3 175 aa11.46□□□□□ -0.58
TRIO-222ENST00000515144 A0A1B0GUS0 222 aa11.46□□□□□ -0.58
TRIO-222ENST00000515144 F6UB75 175 aa11.46□□□□□ -0.58
TRIO-222ENST00000515144 IGHV2-70P01814 119 aa11.46□□□□□ -0.58
TRIO-222ENST00000515144 THAP8Q8NA92 274 aa11.46□□□□□ -0.58
TRIO-222ENST00000515144 IFI27L1Q96BM0 104 aa11.46□□□□□ -0.58
TRIO-222ENST00000515144 RITA1Q96K30 269 aa11.46□□□□□ -0.58
TRIO-222ENST00000515144 ATRAIDQ6UW56 229 aa11.45□□□□□ -0.58
TRIO-222ENST00000515144 NDUFA4L2Q9NRX3 87 aa11.45□□□□□ -0.58
TRIO-222ENST00000515144 CENPVL3A0A0U1RRI6 287 aa11.45□□□□□ -0.58
TRIO-222ENST00000515144 VCYO14598 125 aa11.45□□□□□ -0.58
TRIO-222ENST00000515144 LBHQ53QV2 105 aaPredicted RBP11.45□□□□□ -0.58
TRIO-222ENST00000515144 ATP5L2Q7Z4Y8 100 aa11.45□□□□□ -0.58
TRIO-222ENST00000515144 C9orf66Q5T8R8 295 aa11.45□□□□□ -0.58
TRIO-222ENST00000515144 PRORYQ9H606 182 aa11.45□□□□□ -0.58
TRIO-222ENST00000515144 TRBV25-1A0A075B6N4 114 aa11.45□□□□□ -0.58
TRIO-222ENST00000515144 IGKV2D-24A0A075B6R9 120 aa11.45□□□□□ -0.58
TRIO-222ENST00000515144 TRAV9-2A0A087WT02 112 aa11.45□□□□□ -0.58
TRIO-222ENST00000515144 PFN2P35080 140 aa11.45□□□□□ -0.58
TRIO-222ENST00000515144 ZNF843Q8N446 348 aa11.45□□□□□ -0.58
TRIO-222ENST00000515144 SLC25A2Q9BXI2 301 aa11.45□□□□□ -0.58
TRIO-222ENST00000515144 HLA-DMBP28068 263 aa11.44□□□□□ -0.58
TRIO-222ENST00000515144 GP9P14770 177 aa11.44□□□□□ -0.58
TRIO-222ENST00000515144 LAMTOR3Q9UHA4 124 aa11.44□□□□□ -0.58
TRIO-222ENST00000515144 CDKN1BP46527 198 aa11.44□□□□□ -0.58
TRIO-222ENST00000515144 VWC2Q2TAL6 325 aa11.44□□□□□ -0.58
TRIO-222ENST00000515144 PET117Q6UWS5 81 aa11.44□□□□□ -0.58
TRIO-222ENST00000515144 SPRY2O43597 315 aa11.44□□□□□ -0.58
TRIO-222ENST00000515144 LMO1P25800 156 aa11.44□□□□□ -0.58
TRIO-222ENST00000515144 TMEM158Q8WZ71 300 aa11.44□□□□□ -0.58
TRIO-222ENST00000515144 STAG3L3P0CL85 134 aa11.43□□□□□ -0.58
TRIO-222ENST00000515144 SHANK2-AS3Q9BTD1 123 aa11.43□□□□□ -0.58
TRIO-222ENST00000515144 INAFM1C9JVW0 142 aa11.43□□□□□ -0.58
TRIO-222ENST00000515144 M0R2P5 195 aa11.43□□□□□ -0.58
TRIO-222ENST00000515144 FNDC4Q9H6D8 234 aaPredicted RBP11.43□□□□□ -0.58
TRIO-222ENST00000515144 NEGR1Q7Z3B1 354 aa11.43□□□□□ -0.58
TRIO-222ENST00000515144 TRBV6-6A0A0A6YYG2 114 aa11.43□□□□□ -0.58
TRIO-222ENST00000515144 NOTCH2Q04721 2471 aa11.43□□□□□ -0.58
TRIO-222ENST00000515144 MUC4Q99102 2169 aa11.43□□□□□ -0.58
TRIO-222ENST00000515144 SRSF8Q9BRL6 282 aaKnown RBP11.43□□□□□ -0.58
TRIO-222ENST00000515144 NDUFA4O00483 81 aa11.42□□□□□ -0.58
TRIO-222ENST00000515144 PPBPP02775 128 aa11.42□□□□□ -0.58
TRIO-222ENST00000515144 GNB1LQ9BYB4 327 aa11.42□□□□□ -0.58
TRIO-222ENST00000515144 MORN3Q6PF18 240 aaPredicted RBP11.42□□□□□ -0.58
TRIO-222ENST00000515144 TMEM14EPQ6UXP3 125 aa11.42□□□□□ -0.58
TRIO-222ENST00000515144 C21orf62-AS1Q17RA5 79 aa11.42□□□□□ -0.58
TRIO-222ENST00000515144 SPOCK3Q9BQ16 436 aa11.42□□□□□ -0.58
TRIO-222ENST00000515144 TMEM213A2RRL7 107 aa11.41□□□□□ -0.58
TRIO-222ENST00000515144 RSPO1Q2MKA7 263 aaPredicted RBP11.41□□□□□ -0.58
TRIO-222ENST00000515144 A0A1B0GWB2 263 aa11.41□□□□□ -0.58
TRIO-222ENST00000515144 PIFOQ8TCI5 191 aa11.41□□□□□ -0.58
TRIO-222ENST00000515144 C17orf77Q96MU5 243 aa11.41□□□□□ -0.58
TRIO-222ENST00000515144 GGTLC3B5MD39 225 aa11.4□□□□□ -0.58
TRIO-222ENST00000515144 IGHV7-4-1A0A0J9YVY3 117 aa11.4□□□□□ -0.58
TRIO-222ENST00000515144 C15orf65H3BRN8 121 aa11.4□□□□□ -0.58
TRIO-222ENST00000515144 PRIMA1Q86XR5 153 aa11.4□□□□□ -0.58
TRIO-222ENST00000515144 PTPRBP23467 1997 aa11.4□□□□□ -0.58
TRIO-222ENST00000515144 Q8NA96 180 aa11.4□□□□□ -0.58
TRIO-222ENST00000515144 C19orf84I3L1E1 186 aa11.4□□□□□ -0.59
TRIO-222ENST00000515144 IGHV1OR15-1A0A075B7D0 117 aa11.39□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms