RNA–Protein interactions for RNA: ENST00000515035.5

TCOF1-214, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 2

Gene TCOF1, Length 5,240 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-214ENST00000515035 F8VRH5 84 aa10.69□□□□□ -0.7
TCOF1-214ENST00000515035 SIVA1O15304 175 aa10.69□□□□□ -0.7
TCOF1-214ENST00000515035 FOXL2NBQ6ZUU3 175 aa10.69□□□□□ -0.7
TCOF1-214ENST00000515035 CARD19Q96LW7 228 aa10.69□□□□□ -0.7
TCOF1-214ENST00000515035 KLF2Q9Y5W3 355 aaPredicted RBP10.69□□□□□ -0.7
TCOF1-214ENST00000515035 TRBV19A0A075B6N1 114 aa10.69□□□□□ -0.7
TCOF1-214ENST00000515035 GAGE5Q13069 117 aa10.69□□□□□ -0.7
TCOF1-214ENST00000515035 GAGE6Q13070 117 aa10.69□□□□□ -0.7
TCOF1-214ENST00000515035 CDK2AP2O75956 126 aa10.69□□□□□ -0.7
TCOF1-214ENST00000515035 Q0VFX4 171 aa10.69□□□□□ -0.7
TCOF1-214ENST00000515035 C15orf53Q8NAA6 179 aa10.69□□□□□ -0.7
TCOF1-214ENST00000515035 NTN5Q8WTR8 489 aaPredicted RBP10.69□□□□□ -0.7
TCOF1-214ENST00000515035 HLA-DRB4P13762 266 aa10.69□□□□□ -0.7
TCOF1-214ENST00000515035 TMEM126AQ9H061 195 aa10.69□□□□□ -0.7
TCOF1-214ENST00000515035 SS18L2Q9UHA2 77 aa10.69□□□□□ -0.7
TCOF1-214ENST00000515035 HLA-DRB4X5D2U9 266 aa10.69□□□□□ -0.7
TCOF1-214ENST00000515035 COL6A6A6NMZ7 2263 aa10.68□□□□□ -0.7
TCOF1-214ENST00000515035 NPYP01303 97 aa10.68□□□□□ -0.7
TCOF1-214ENST00000515035 IGKV1-39P01597 117 aa10.68□□□□□ -0.7
TCOF1-214ENST00000515035 IGKV1D-39P04432 117 aa10.68□□□□□ -0.7
TCOF1-214ENST00000515035 C12orf74Q32Q52 190 aa10.68□□□□□ -0.7
TCOF1-214ENST00000515035 C11orf52Q96A22 123 aa10.68□□□□□ -0.7
TCOF1-214ENST00000515035 ZNF407Q9C0G0 2248 aa10.68□□□□□ -0.7
TCOF1-214ENST00000515035 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP10.68□□□□□ -0.75e-9■■■■□ 23.2
TCOF1-214ENST00000515035 DEFB125Q8N687 156 aa10.68□□□□□ -0.7
TCOF1-214ENST00000515035 NDUFA12Q9UI09 145 aa10.68□□□□□ -0.7
TCOF1-214ENST00000515035 SDHAF1A6NFY7 115 aa10.68□□□□□ -0.7
TCOF1-214ENST00000515035 WIPF3A6NGB9 483 aa10.68□□□□□ -0.7
TCOF1-214ENST00000515035 IL17RELQ6ZVW7 336 aa10.68□□□□□ -0.7
TCOF1-214ENST00000515035 ANKRD29Q8N6D5 301 aa10.68□□□□□ -0.7
TCOF1-214ENST00000515035 DKK1O94907 266 aa10.67□□□□□ -0.7
TCOF1-214ENST00000515035 HLA-DMBP28068 263 aa10.67□□□□□ -0.7
TCOF1-214ENST00000515035 USF3Q68DE3 2245 aa10.67□□□□□ -0.7
TCOF1-214ENST00000515035 TRAV26-2A0A0B4J265 109 aa10.67□□□□□ -0.7
TCOF1-214ENST00000515035 SS18Q15532 418 aa10.67□□□□□ -0.7
TCOF1-214ENST00000515035 EFNA4P52798 201 aa10.67□□□□□ -0.7
TCOF1-214ENST00000515035 KNCNA6PVL3 124 aa10.67□□□□□ -0.7
TCOF1-214ENST00000515035 USMG5Q96IX5 58 aa10.67□□□□□ -0.7
TCOF1-214ENST00000515035 UBE2E2Q96LR5 201 aa10.67□□□□□ -0.7
TCOF1-214ENST00000515035 DKK2Q9UBU2 259 aa10.67□□□□□ -0.7
TCOF1-214ENST00000515035 IGHV2-70DA0A0C4DH43 119 aa10.66□□□□□ -0.7
TCOF1-214ENST00000515035 NDUFA4L2Q9NRX3 87 aa10.66□□□□□ -0.7
TCOF1-214ENST00000515035 H3BUX3 64 aa10.66□□□□□ -0.7
TCOF1-214ENST00000515035 K7ENP7 123 aa10.66□□□□□ -0.7
TCOF1-214ENST00000515035 CMC4P56277 68 aaPredicted RBP10.66□□□□□ -0.7
TCOF1-214ENST00000515035 PRR25Q96S07 402 aa10.66□□□□□ -0.7
TCOF1-214ENST00000515035 ZNRD1Q9P1U0 126 aa10.66□□□□□ -0.7
TCOF1-214ENST00000515035 MGAMO43451 1857 aa10.66□□□□□ -0.7
TCOF1-214ENST00000515035 MBD3L4A6NDZ8 208 aaPredicted RBP10.66□□□□□ -0.7
TCOF1-214ENST00000515035 MBD3L3A6NE82 208 aaPredicted RBP10.66□□□□□ -0.7
TCOF1-214ENST00000515035 MBD3L5A6NJ08 208 aaPredicted RBP10.66□□□□□ -0.7
TCOF1-214ENST00000515035 PFN2P35080 140 aa10.66□□□□□ -0.7
TCOF1-214ENST00000515035 CRYBA4P53673 196 aa10.66□□□□□ -0.7
TCOF1-214ENST00000515035 MBD3L2Q8NHZ7 208 aaPredicted RBP10.66□□□□□ -0.7
TCOF1-214ENST00000515035 FNDC1Q4ZHG4 1894 aaPredicted RBP10.66□□□□□ -0.7
TCOF1-214ENST00000515035 ZSWIM8A7E2V4 1837 aa10.66□□□□□ -0.7
TCOF1-214ENST00000515035 TEX48A0A1B0GUV7 120 aa10.66□□□□□ -0.7
TCOF1-214ENST00000515035 OVOL3O00110 214 aa10.66□□□□□ -0.7
TCOF1-214ENST00000515035 IGHG3P01860 377 aa10.66□□□□□ -0.7
TCOF1-214ENST00000515035 ANXA2RQ3ZCQ2 193 aa10.66□□□□□ -0.7
TCOF1-214ENST00000515035 COA6Q5JTJ3 125 aaKnown RBP10.66□□□□□ -0.7
TCOF1-214ENST00000515035 SMIM2Q9BVW6 85 aa10.66□□□□□ -0.7
TCOF1-214ENST00000515035 I3L3M4 83 aa10.65□□□□□ -0.7
TCOF1-214ENST00000515035 NDUFS7O75251 213 aa10.65□□□□□ -0.7
TCOF1-214ENST00000515035 DAZ1Q9NQZ3 744 aaKnown RBP10.65□□□□□ -0.7
TCOF1-214ENST00000515035 SAP30O75446 220 aa10.65□□□□□ -0.7
TCOF1-214ENST00000515035 RBMY1FQ15415 496 aaKnown RBP10.65□□□□□ -0.7
TCOF1-214ENST00000515035 DOCK8Q8NF50 2099 aa10.65□□□□□ -0.7
TCOF1-214ENST00000515035 J3QQQ9 107 aa10.65□□□□□ -0.71
TCOF1-214ENST00000515035 M0R1W7 72 aa10.65□□□□□ -0.71
TCOF1-214ENST00000515035 ASPHD1Q5U4P2 390 aa10.65□□□□□ -0.71
TCOF1-214ENST00000515035 FAM223BA6NKX1 122 aa10.64□□□□□ -0.71
TCOF1-214ENST00000515035 NDUFB8O95169 186 aa10.64□□□□□ -0.71
TCOF1-214ENST00000515035 FAM223AQ8IWN6 122 aa10.64□□□□□ -0.71
TCOF1-214ENST00000515035 ZNF747Q9BV97 191 aa10.64□□□□□ -0.71
TCOF1-214ENST00000515035 RHODO00212 210 aa10.64□□□□□ -0.71
TCOF1-214ENST00000515035 NBL1P41271 181 aa10.64□□□□□ -0.71
TCOF1-214ENST00000515035 RPL32P62910 135 aaKnown RBP10.64□□□□□ -0.71
TCOF1-214ENST00000515035 SUMO4Q6EEV6 95 aa10.64□□□□□ -0.71
TCOF1-214ENST00000515035 LYPD2Q6UXB3 125 aa10.64□□□□□ -0.71
TCOF1-214ENST00000515035 BRD3OSQ6XYD6 125 aa10.64□□□□□ -0.71
TCOF1-214ENST00000515035 PLA2G2CQ5R387 149 aa10.64□□□□□ -0.71
TCOF1-214ENST00000515035 SMIM20Q8N5G0 67 aa10.64□□□□□ -0.71
TCOF1-214ENST00000515035 LYPD6BQ8NI32 183 aa10.64□□□□□ -0.71
TCOF1-214ENST00000515035 TRAV12-1A0A0B4J245 112 aa10.64□□□□□ -0.71
TCOF1-214ENST00000515035 B3GALT5-AS1P59052 145 aa10.64□□□□□ -0.71
TCOF1-214ENST00000515035 PIP4P2Q8N4L2 257 aa10.64□□□□□ -0.71
TCOF1-214ENST00000515035 A0A0G2JNJ9 132 aa10.63□□□□□ -0.71
TCOF1-214ENST00000515035 RNASE8Q8TDE3 154 aaKnown RBP10.63□□□□□ -0.71
TCOF1-214ENST00000515035 Q9UFV3 132 aa10.63□□□□□ -0.71
TCOF1-214ENST00000515035 PTPRDP23468 1912 aa10.63□□□□□ -0.71
TCOF1-214ENST00000515035 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP10.63□□□□□ -0.71
TCOF1-214ENST00000515035 SH2D6Q7Z4S9 175 aa10.63□□□□□ -0.71
TCOF1-214ENST00000515035 VWA8A3KMH1 1905 aa10.63□□□□□ -0.71
TCOF1-214ENST00000515035 IL15RAQ13261 267 aa10.63□□□□□ -0.71
TCOF1-214ENST00000515035 PCP2Q8IVA1 136 aa10.63□□□□□ -0.71
TCOF1-214ENST00000515035 VOPP1Q96AW1 172 aa10.63□□□□□ -0.71
TCOF1-214ENST00000515035 ZC2HC1AQ96GY0 325 aa10.63□□□□□ -0.71
TCOF1-214ENST00000515035 RS1O15537 224 aa10.63□□□□□ -0.71
TCOF1-214ENST00000515035 RPL35AP18077 110 aaKnown RBP10.63□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 130.2 ms