RNA–Protein interactions for RNA: ENST00000514469.1

HMGXB3-205, Transcript of HMG-box containing 3, humanhuman

TSL 5

Gene HMGXB3, Length 975 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-205ENST00000514469 PYGO2Q9BRQ0 406 aa7.32□□□□□ -1.24
HMGXB3-205ENST00000514469 LINC00467Q9BRT7 94 aa7.32□□□□□ -1.24
HMGXB3-205ENST00000514469 FUT9Q9Y231 359 aa7.32□□□□□ -1.24
HMGXB3-205ENST00000514469 HSPB11Q9Y547 144 aa7.32□□□□□ -1.24
HMGXB3-205ENST00000514469 IGKV2-40A0A087WW87 121 aaPredicted RBP7.31□□□□□ -1.24
HMGXB3-205ENST00000514469 C7orf71A4D174 169 aa7.31□□□□□ -1.24
HMGXB3-205ENST00000514469 SNURFLB1AK76 121 aa7.31□□□□□ -1.24
HMGXB3-205ENST00000514469 C17orf112F2Z3M2 114 aa7.31□□□□□ -1.24
HMGXB3-205ENST00000514469 SSNA1O43805 119 aa7.31□□□□□ -1.24
HMGXB3-205ENST00000514469 MPC2O95563 127 aa7.31□□□□□ -1.24
HMGXB3-205ENST00000514469 NUDT3O95989 172 aa7.31□□□□□ -1.24
HMGXB3-205ENST00000514469 IGKV2D-40P01614 121 aaPredicted RBP7.31□□□□□ -1.24
HMGXB3-205ENST00000514469 CRISP2P16562 243 aa7.31□□□□□ -1.24
HMGXB3-205ENST00000514469 BTN1A1Q13410 526 aa7.31□□□□□ -1.24
HMGXB3-205ENST00000514469 ICAM4Q14773 271 aa7.31□□□□□ -1.24
HMGXB3-205ENST00000514469 C9orf47Q6ZRZ4 202 aa7.31□□□□□ -1.24
HMGXB3-205ENST00000514469 FXYD5Q96DB9 178 aa7.31□□□□□ -1.24
HMGXB3-205ENST00000514469 PHYHIPLQ96FC7 376 aa7.31□□□□□ -1.24
HMGXB3-205ENST00000514469 ATG101Q9BSB4 218 aa7.31□□□□□ -1.24
HMGXB3-205ENST00000514469 AGPAT4-IT1Q9H0P7 198 aa7.31□□□□□ -1.24
HMGXB3-205ENST00000514469 OR51M1Q9H341 326 aa7.31□□□□□ -1.24
HMGXB3-205ENST00000514469 AAMDCQ9H7C9 122 aa7.31□□□□□ -1.24
HMGXB3-205ENST00000514469 GAGE12BA1L429 117 aa7.3□□□□□ -1.24
HMGXB3-205ENST00000514469 ZNF324O75467 553 aaPredicted RBP7.3□□□□□ -1.24
HMGXB3-205ENST00000514469 GAGE7O76087 117 aa7.3□□□□□ -1.24
HMGXB3-205ENST00000514469 NBEAP1P0C6P0 100 aa7.3□□□□□ -1.24
HMGXB3-205ENST00000514469 GAGE12FP0CL80 117 aa7.3□□□□□ -1.24
HMGXB3-205ENST00000514469 GAGE12GP0CL81 117 aa7.3□□□□□ -1.24
HMGXB3-205ENST00000514469 GAGE12IP0CL82 117 aa7.3□□□□□ -1.24
HMGXB3-205ENST00000514469 HOXA5P20719 270 aa7.3□□□□□ -1.24
HMGXB3-205ENST00000514469 CD300CQ08708 224 aa7.3□□□□□ -1.24
HMGXB3-205ENST00000514469 DAZ2Q13117 558 aaKnown RBP7.3□□□□□ -1.24
HMGXB3-205ENST00000514469 PRR9Q5T870 116 aa7.3□□□□□ -1.24
HMGXB3-205ENST00000514469 FAM122CQ6P4D5 195 aa7.3□□□□□ -1.24
HMGXB3-205ENST00000514469 C11orf72Q8NBR9 251 aa7.3□□□□□ -1.24
HMGXB3-205ENST00000514469 ZNF680Q8NEM1 530 aa7.3□□□□□ -1.24
HMGXB3-205ENST00000514469 ZNRF2Q8NHG8 242 aa7.3□□□□□ -1.24
HMGXB3-205ENST00000514469 ZNF503Q96F45 646 aa7.3□□□□□ -1.24
HMGXB3-205ENST00000514469 PAXXQ9BUH6 204 aa7.3□□□□□ -1.24
HMGXB3-205ENST00000514469 NMBP08949 121 aa7.29□□□□□ -1.24
HMGXB3-205ENST00000514469 OR10J4P0C629 311 aa7.29□□□□□ -1.24
HMGXB3-205ENST00000514469 M6PRP20645 277 aa7.29□□□□□ -1.24
HMGXB3-205ENST00000514469 RPL12P30050 165 aaKnown RBP7.29□□□□□ -1.24
HMGXB3-205ENST00000514469 ANXA2RQ3ZCQ2 193 aa7.29□□□□□ -1.24
HMGXB3-205ENST00000514469 TMEM78Q5T7P6 136 aa7.29□□□□□ -1.24
HMGXB3-205ENST00000514469 Q6ZTI0 123 aa7.29□□□□□ -1.24
HMGXB3-205ENST00000514469 EIF4E3Q8N5X7 224 aaKnown RBP7.29□□□□□ -1.24
HMGXB3-205ENST00000514469 ZFAND2AQ8N6M9 145 aa7.29□□□□□ -1.24
HMGXB3-205ENST00000514469 C18orf15Q96N68 181 aa7.29□□□□□ -1.24
HMGXB3-205ENST00000514469 VGLL1Q99990 258 aa7.29□□□□□ -1.24
HMGXB3-205ENST00000514469 MBD2Q9UBB5 411 aa7.29□□□□□ -1.24
HMGXB3-205ENST00000514469 LINC00588Q9Y4M8 146 aa7.29□□□□□ -1.24
HMGXB3-205ENST00000514469 NACAE9PAV3 2078 aa7.29□□□□□ -1.24
HMGXB3-205ENST00000514469 TRAV26-1A0A087WT03 109 aa7.28□□□□□ -1.24
HMGXB3-205ENST00000514469 TRBV7-9A0A0J9YWB2 115 aa7.28□□□□□ -1.24
HMGXB3-205ENST00000514469 NBDYA0A0U1RRE5 68 aa7.28□□□□□ -1.24
HMGXB3-205ENST00000514469 OR7C2O60412 319 aa7.28□□□□□ -1.24
HMGXB3-205ENST00000514469 GPX1P07203 203 aa7.28□□□□□ -1.24
HMGXB3-205ENST00000514469 RNASE4P34096 147 aaKnown RBP7.28□□□□□ -1.24
HMGXB3-205ENST00000514469 CCL18P55774 89 aa7.28□□□□□ -1.24
HMGXB3-205ENST00000514469 UBE2L3P68036 154 aaKnown RBP7.28□□□□□ -1.24
HMGXB3-205ENST00000514469 OR5I1Q13606 314 aa7.28□□□□□ -1.24
HMGXB3-205ENST00000514469 KHDC3LQ587J8 217 aa7.28□□□□□ -1.24
HMGXB3-205ENST00000514469 SOHLH1Q5JUK2 328 aa7.28□□□□□ -1.24
HMGXB3-205ENST00000514469 FFAR4Q5NUL3 377 aa7.28□□□□□ -1.24
HMGXB3-205ENST00000514469 C1orf134Q5TEV5 83 aa7.28□□□□□ -1.24
HMGXB3-205ENST00000514469 LYPD1Q8N2G4 141 aa7.28□□□□□ -1.24
HMGXB3-205ENST00000514469 RXFP4Q8TDU9 374 aa7.28□□□□□ -1.24
HMGXB3-205ENST00000514469 GNPNAT1Q96EK6 184 aaPredicted RBP7.28□□□□□ -1.24
HMGXB3-205ENST00000514469 TMPRSS5Q9H3S3 457 aa7.28□□□□□ -1.24
HMGXB3-205ENST00000514469 BATF3Q9NR55 127 aa7.28□□□□□ -1.24
HMGXB3-205ENST00000514469 GSN-AS1Q9NRJ2 163 aa7.28□□□□□ -1.24
HMGXB3-205ENST00000514469 ZNF492Q9P255 531 aa7.28□□□□□ -1.24
HMGXB3-205ENST00000514469 RBAKDNA6NC62 111 aa7.27□□□□□ -1.25
HMGXB3-205ENST00000514469 H3BNG1 76 aa7.27□□□□□ -1.25
HMGXB3-205ENST00000514469 IFNA5P01569 189 aa7.27□□□□□ -1.25
HMGXB3-205ENST00000514469 ZNF138P52744 262 aa7.27□□□□□ -1.25
HMGXB3-205ENST00000514469 TCL1AP56279 114 aa7.27□□□□□ -1.25
HMGXB3-205ENST00000514469 IBA57Q5T440 356 aaKnown RBP7.27□□□□□ -1.25
HMGXB3-205ENST00000514469 SSX7Q7RTT5 188 aa7.27□□□□□ -1.25
HMGXB3-205ENST00000514469 Q8TAT8 98 aa7.27□□□□□ -1.25
HMGXB3-205ENST00000514469 SMIM3Q9BZL3 60 aa7.27□□□□□ -1.25
HMGXB3-205ENST00000514469 Q9H3A6 140 aa7.27□□□□□ -1.25
HMGXB3-205ENST00000514469 WFDC1Q9HC57 220 aa7.27□□□□□ -1.25
HMGXB3-205ENST00000514469 PCLOQ9Y6V0 5065 aa7.26□□□□□ -1.25
HMGXB3-205ENST00000514469 IGHV1OR15-1A0A075B7D0 117 aa7.26□□□□□ -1.25
HMGXB3-205ENST00000514469 A0A0J9YY99 117 aa7.26□□□□□ -1.25
HMGXB3-205ENST00000514469 SPINK4O60575 86 aa7.26□□□□□ -1.25
HMGXB3-205ENST00000514469 TAS2R45P59539 299 aa7.26□□□□□ -1.25
HMGXB3-205ENST00000514469 RANP62826 216 aaKnown RBP7.26□□□□□ -1.25
HMGXB3-205ENST00000514469 Q6ZQT7 251 aa7.26□□□□□ -1.25
HMGXB3-205ENST00000514469 SCGB1C1Q8TD33 95 aa7.26□□□□□ -1.25
HMGXB3-205ENST00000514469 TP53TG3Q9ULZ0 132 aa7.26□□□□□ -1.25
HMGXB3-205ENST00000514469 KLF12Q9Y4X4 402 aa7.26□□□□□ -1.25
HMGXB3-205ENST00000514469 ALG5Q9Y673 324 aa7.26□□□□□ -1.25
HMGXB3-205ENST00000514469 TRGV2A0A075B6R0 118 aa7.25□□□□□ -1.25
HMGXB3-205ENST00000514469 TRGV1A0A0A0MS02 117 aa7.25□□□□□ -1.25
HMGXB3-205ENST00000514469 RGS13O14921 159 aa7.25□□□□□ -1.25
HMGXB3-205ENST00000514469 PTTG1O95997 202 aa7.25□□□□□ -1.25
HMGXB3-205ENST00000514469 CSN1S1P47710 185 aa7.25□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 104.1 ms