RNA–Protein interactions for RNA: ENST00000509357.5

PDLIM5-213, Transcript of PDZ and LIM domain 5, humanhuman

TSL 5

Gene PDLIM5, Length 554 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-213ENST00000509357 CTXND1A0A1B0GTU2 59 aa6.29□□□□□ -1.4
PDLIM5-213ENST00000509357 SMIM9A6NGZ8 99 aa6.29□□□□□ -1.4
PDLIM5-213ENST00000509357 M0R2Z0 102 aa6.29□□□□□ -1.4
PDLIM5-213ENST00000509357 CT45A10P0DMU9 189 aa6.29□□□□□ -1.4
PDLIM5-213ENST00000509357 RANP62826 216 aaKnown RBP6.29□□□□□ -1.4
PDLIM5-213ENST00000509357 GNG5P63218 68 aa6.29□□□□□ -1.4
PDLIM5-213ENST00000509357 PDE6HQ13956 83 aa6.29□□□□□ -1.4
PDLIM5-213ENST00000509357 Q6ZTC4 211 aa6.29□□□□□ -1.4
PDLIM5-213ENST00000509357 C1orf158Q8N1D5 194 aa6.29□□□□□ -1.4
PDLIM5-213ENST00000509357 CLUHP3Q96NS8 147 aa6.29□□□□□ -1.4
PDLIM5-213ENST00000509357 SLC50A1Q9BRV3 221 aa6.29□□□□□ -1.4
PDLIM5-213ENST00000509357 VPS13DQ5THJ4 4388 aa6.29□□□□□ -1.4
PDLIM5-213ENST00000509357 TRAV12-2A0A075B6T6 113 aa6.28□□□□□ -1.4
PDLIM5-213ENST00000509357 A0A1W2PPV4 95 aa6.28□□□□□ -1.4
PDLIM5-213ENST00000509357 TMEM189A5PLL7 270 aa6.28□□□□□ -1.4
PDLIM5-213ENST00000509357 NPIPB6E9PJ23 425 aa6.28□□□□□ -1.4
PDLIM5-213ENST00000509357 PFDN1O60925 122 aa6.28□□□□□ -1.4
PDLIM5-213ENST00000509357 HBE1P02100 147 aa6.28□□□□□ -1.4
PDLIM5-213ENST00000509357 SPART-AS1P0CW21 52 aa6.28□□□□□ -1.4
PDLIM5-213ENST00000509357 HIST1H1AQ02539 215 aaPredicted RBP6.28□□□□□ -1.4
PDLIM5-213ENST00000509357 GUK1Q16774 197 aa6.28□□□□□ -1.4
PDLIM5-213ENST00000509357 SPINK13Q1W4C9 94 aa6.28□□□□□ -1.4
PDLIM5-213ENST00000509357 ZNF705AQ6ZN79 300 aaPredicted RBP6.28□□□□□ -1.4
PDLIM5-213ENST00000509357 PQLC2Q6ZP29 291 aa6.28□□□□□ -1.4
PDLIM5-213ENST00000509357 TVP23CQ96ET8 276 aa6.28□□□□□ -1.4
PDLIM5-213ENST00000509357 ACTR3CQ9C0K3 210 aaPredicted RBP6.28□□□□□ -1.4
PDLIM5-213ENST00000509357 AGPAT4-IT1Q9H0P7 198 aa6.28□□□□□ -1.4
PDLIM5-213ENST00000509357 EPPK1P58107 5090 aaKnown RBP6.28□□□□□ -1.4
PDLIM5-213ENST00000509357 DEFB131BA0A096LNP1 70 aa6.27□□□□□ -1.41
PDLIM5-213ENST00000509357 TRAV8-1A0A0A6YYK1 113 aa6.27□□□□□ -1.41
PDLIM5-213ENST00000509357 A0A1B0GV50 99 aa6.27□□□□□ -1.41
PDLIM5-213ENST00000509357 MAP1LC3B2A6NCE7 125 aa6.27□□□□□ -1.41
PDLIM5-213ENST00000509357 INSP01308 110 aa6.27□□□□□ -1.41
PDLIM5-213ENST00000509357 IGLV2-11P01706 119 aa6.27□□□□□ -1.41
PDLIM5-213ENST00000509357 MBP02144 154 aa6.27□□□□□ -1.41
PDLIM5-213ENST00000509357 AMBPP02760 352 aa6.27□□□□□ -1.41
PDLIM5-213ENST00000509357 TPT1P13693 172 aaKnown RBP6.27□□□□□ -1.41
PDLIM5-213ENST00000509357 SULT1A2P50226 295 aa6.27□□□□□ -1.41
PDLIM5-213ENST00000509357 TCTAP57738 103 aa6.27□□□□□ -1.41
PDLIM5-213ENST00000509357 RRN3P1Q2M238 152 aa6.27□□□□□ -1.41
PDLIM5-213ENST00000509357 C12orf74Q32Q52 190 aa6.27□□□□□ -1.41
PDLIM5-213ENST00000509357 AKR1C8PQ5T2L2 129 aa6.27□□□□□ -1.41
PDLIM5-213ENST00000509357 LGALS9CQ6DKI2 356 aa6.27□□□□□ -1.41
PDLIM5-213ENST00000509357 SLC51BQ86UW2 128 aa6.27□□□□□ -1.41
PDLIM5-213ENST00000509357 Q8TAT8 98 aa6.27□□□□□ -1.41
PDLIM5-213ENST00000509357 FAM213BQ8TBF2 198 aa6.27□□□□□ -1.41
PDLIM5-213ENST00000509357 MBD3L1Q8WWY6 194 aa6.27□□□□□ -1.41
PDLIM5-213ENST00000509357 MRPL53Q96EL3 112 aaKnown RBP6.27□□□□□ -1.41
PDLIM5-213ENST00000509357 NEU1Q99519 415 aa6.27□□□□□ -1.41
PDLIM5-213ENST00000509357 MAP1LC3BQ9GZQ8 125 aa6.27□□□□□ -1.41
PDLIM5-213ENST00000509357 CELA1Q9UNI1 258 aa6.27□□□□□ -1.41
PDLIM5-213ENST00000509357 LOC102723971A0A1B0GUV8 181 aa6.26□□□□□ -1.41
PDLIM5-213ENST00000509357 PGPA6NDG6 321 aa6.26□□□□□ -1.41
PDLIM5-213ENST00000509357 FAM74A7A6NL05 159 aa6.26□□□□□ -1.41
PDLIM5-213ENST00000509357 DIRC3C9JPN6 131 aa6.26□□□□□ -1.41
PDLIM5-213ENST00000509357 CXorf1O96002 111 aa6.26□□□□□ -1.41
PDLIM5-213ENST00000509357 HTN1P15515 57 aa6.26□□□□□ -1.41
PDLIM5-213ENST00000509357 HTN3P15516 51 aa6.26□□□□□ -1.41
PDLIM5-213ENST00000509357 ATP5G3P48201 142 aa6.26□□□□□ -1.41
PDLIM5-213ENST00000509357 TAS2R45P59539 299 aa6.26□□□□□ -1.41
PDLIM5-213ENST00000509357 UBE2G2P60604 165 aa6.26□□□□□ -1.41
PDLIM5-213ENST00000509357 ALKAL2Q6UX46 152 aa6.26□□□□□ -1.41
PDLIM5-213ENST00000509357 CCDC28AQ8IWP9 274 aa6.26□□□□□ -1.41
PDLIM5-213ENST00000509357 ZFAND2AQ8N6M9 145 aa6.26□□□□□ -1.41
PDLIM5-213ENST00000509357 OR10J6PQ8NGY7 276 aa6.26□□□□□ -1.41
PDLIM5-213ENST00000509357 SGK494Q96LW2 274 aa6.26□□□□□ -1.41
PDLIM5-213ENST00000509357 IGF2BP2-AS1Q96M15 143 aa6.26□□□□□ -1.41
PDLIM5-213ENST00000509357 LINC00479Q96M42 142 aa6.26□□□□□ -1.41
PDLIM5-213ENST00000509357 LINC01587Q99440 93 aa6.26□□□□□ -1.41
PDLIM5-213ENST00000509357 OTORQ9NRC9 128 aa6.26□□□□□ -1.41
PDLIM5-213ENST00000509357 IGHV4-4A0A075B6R2 117 aa6.25□□□□□ -1.41
PDLIM5-213ENST00000509357 TEX48A0A1B0GUV7 120 aa6.25□□□□□ -1.41
PDLIM5-213ENST00000509357 PLAC8L1A1L4L8 177 aa6.25□□□□□ -1.41
PDLIM5-213ENST00000509357 ZNF705GA8MUZ8 300 aaPredicted RBP6.25□□□□□ -1.41
PDLIM5-213ENST00000509357 BTN1A1Q13410 526 aa6.25□□□□□ -1.41
PDLIM5-213ENST00000509357 FAM222AQ5U5X8 452 aa6.25□□□□□ -1.41
PDLIM5-213ENST00000509357 GFI1BQ5VTD9 330 aa6.25□□□□□ -1.41
PDLIM5-213ENST00000509357 C9orf47Q6ZRZ4 202 aa6.25□□□□□ -1.41
PDLIM5-213ENST00000509357 PCNPQ8WW12 178 aaKnown RBP6.25□□□□□ -1.41
PDLIM5-213ENST00000509357 NIPSNAP3BQ9BS92 247 aa6.25□□□□□ -1.41
PDLIM5-213ENST00000509357 KLLNB2CW77 178 aa6.24□□□□□ -1.41
PDLIM5-213ENST00000509357 UMAD1C9J7I0 102 aa6.24□□□□□ -1.41
PDLIM5-213ENST00000509357 J3KRW8 73 aa6.24□□□□□ -1.41
PDLIM5-213ENST00000509357 AZU1P20160 251 aa6.24□□□□□ -1.41
PDLIM5-213ENST00000509357 DAD1P61803 113 aa6.24□□□□□ -1.41
PDLIM5-213ENST00000509357 LYPD1Q8N2G4 141 aa6.24□□□□□ -1.41
PDLIM5-213ENST00000509357 SFT2D1Q8WV19 159 aa6.24□□□□□ -1.41
PDLIM5-213ENST00000509357 NDUFAF3Q9BU61 184 aa6.24□□□□□ -1.41
PDLIM5-213ENST00000509357 ZNF492Q9P255 531 aa6.24□□□□□ -1.41
PDLIM5-213ENST00000509357 DKK2Q9UBU2 259 aa6.24□□□□□ -1.41
PDLIM5-213ENST00000509357 APLNQ9ULZ1 77 aa6.24□□□□□ -1.41
PDLIM5-213ENST00000509357 RPH3ALQ9UNE2 315 aa6.24□□□□□ -1.41
PDLIM5-213ENST00000509357 PRELID1Q9Y255 219 aa6.24□□□□□ -1.41
PDLIM5-213ENST00000509357 BIRC6Q9NR09 4857 aa6.23□□□□□ -1.41
PDLIM5-213ENST00000509357 TRAV34A0A0B4J273 112 aa6.23□□□□□ -1.41
PDLIM5-213ENST00000509357 A0A1W2PRE2 83 aa6.23□□□□□ -1.41
PDLIM5-213ENST00000509357 PAGE4O60829 102 aa6.23□□□□□ -1.41
PDLIM5-213ENST00000509357 ZNF324O75467 553 aaPredicted RBP6.23□□□□□ -1.41
PDLIM5-213ENST00000509357 TCRAP04437 139 aa6.23□□□□□ -1.41
PDLIM5-213ENST00000509357 CRISP2P16562 243 aa6.23□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 132.9 ms