RNA–Protein interactions for RNA: ENST00000509277.5

LIMCH1-209, Transcript of LIM and calponin homology domains 1, humanhuman

TSL 2 BASIC

Gene LIMCH1, Length 3,474 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMCH1-209ENST00000509277 A0A1W2PPI3 338 aa6.86□□□□□ -1.31
LIMCH1-209ENST00000509277 G3V4G9 280 aa6.86□□□□□ -1.31
LIMCH1-209ENST00000509277 ARL3P36405 182 aa6.86□□□□□ -1.31
LIMCH1-209ENST00000509277 OR10J3Q5JRS4 329 aa6.86□□□□□ -1.31
LIMCH1-209ENST00000509277 MGST2Q99735 147 aa6.86□□□□□ -1.31
LIMCH1-209ENST00000509277 RASL11BQ9BPW5 248 aa6.86□□□□□ -1.31
LIMCH1-209ENST00000509277 C1RLQ9NZP8 487 aa6.86□□□□□ -1.31
LIMCH1-209ENST00000509277 TRAV8-1A0A0A6YYK1 113 aa6.86□□□□□ -1.31
LIMCH1-209ENST00000509277 A8MWL6 223 aa6.86□□□□□ -1.31
LIMCH1-209ENST00000509277 PRSS1P07477 247 aa6.86□□□□□ -1.31
LIMCH1-209ENST00000509277 TEPPQ6URK8 271 aa6.86□□□□□ -1.31
LIMCH1-209ENST00000509277 PCP2Q8IVA1 136 aa6.86□□□□□ -1.31
LIMCH1-209ENST00000509277 SMIM20Q8N5G0 67 aa6.86□□□□□ -1.31
LIMCH1-209ENST00000509277 INAFM1C9JVW0 142 aa6.86□□□□□ -1.31
LIMCH1-209ENST00000509277 MOSP00540 346 aa6.86□□□□□ -1.31
LIMCH1-209ENST00000509277 STAG3L3P0CL85 134 aa6.86□□□□□ -1.31
LIMCH1-209ENST00000509277 INSL3P51460 131 aa6.86□□□□□ -1.31
LIMCH1-209ENST00000509277 TAS2R45P59539 299 aa6.86□□□□□ -1.31
LIMCH1-209ENST00000509277 TMEM95Q3KNT9 176 aa6.86□□□□□ -1.31
LIMCH1-209ENST00000509277 OR11H6Q8NGC7 330 aa6.86□□□□□ -1.31
LIMCH1-209ENST00000509277 LSM10Q969L4 123 aaKnown RBP6.86□□□□□ -1.31
LIMCH1-209ENST00000509277 FOXC2Q99958 501 aa6.86□□□□□ -1.31
LIMCH1-209ENST00000509277 GGTLC1Q9BX51 225 aa6.86□□□□□ -1.31
LIMCH1-209ENST00000509277 ZNF257Q9Y2Q1 563 aa6.86□□□□□ -1.31
LIMCH1-209ENST00000509277 IGHV1-24A0A0C4DH33 117 aa6.85□□□□□ -1.31
LIMCH1-209ENST00000509277 HAX1O00165 279 aa6.85□□□□□ -1.31
LIMCH1-209ENST00000509277 GATA3P23771 443 aa6.85□□□□□ -1.31
LIMCH1-209ENST00000509277 TMEM30BQ3MIR4 351 aa6.85□□□□□ -1.31
LIMCH1-209ENST00000509277 ZNF436-AS1Q8NC38 126 aaPredicted RBP6.85□□□□□ -1.31
LIMCH1-209ENST00000509277 OR1L4Q8NGR5 311 aa6.85□□□□□ -1.31
LIMCH1-209ENST00000509277 SLC25A33Q9BSK2 321 aa6.85□□□□□ -1.31
LIMCH1-209ENST00000509277 TRBV20-1A0A075B6N2 111 aa6.85□□□□□ -1.31
LIMCH1-209ENST00000509277 IGHV3-35A0A0C4DH35 117 aa6.85□□□□□ -1.31
LIMCH1-209ENST00000509277 H7C2G1 150 aa6.85□□□□□ -1.31
LIMCH1-209ENST00000509277 HOXA3O43365 443 aaPredicted RBP6.85□□□□□ -1.31
LIMCH1-209ENST00000509277 LY6G6DO95868 133 aa6.85□□□□□ -1.31
LIMCH1-209ENST00000509277 IGHV3-23P01764 117 aa6.85□□□□□ -1.31
LIMCH1-209ENST00000509277 CLEC3BP05452 202 aa6.85□□□□□ -1.31
LIMCH1-209ENST00000509277 KIR2DS2P43631 304 aa6.85□□□□□ -1.31
LIMCH1-209ENST00000509277 CSN1S1P47710 185 aa6.85□□□□□ -1.31
LIMCH1-209ENST00000509277 PDPNQ86YL7 162 aa6.85□□□□□ -1.31
LIMCH1-209ENST00000509277 VSTM2AQ8TAG5 236 aa6.85□□□□□ -1.31
LIMCH1-209ENST00000509277 AP5S1Q9NUS5 200 aa6.85□□□□□ -1.31
LIMCH1-209ENST00000509277 P01737 135 aa6.85□□□□□ -1.31
LIMCH1-209ENST00000509277 STAG3L2P0CL84 134 aa6.85□□□□□ -1.31
LIMCH1-209ENST00000509277 OR5AN1Q8NGI8 311 aa6.85□□□□□ -1.31
LIMCH1-209ENST00000509277 MBD6Q96DN6 1003 aa6.85□□□□□ -1.31
LIMCH1-209ENST00000509277 TCF19Q9Y242 345 aa6.85□□□□□ -1.31
LIMCH1-209ENST00000509277 NBR2O15453 112 aa6.84□□□□□ -1.31
LIMCH1-209ENST00000509277 COX7A2P2O60397 106 aa6.84□□□□□ -1.31
LIMCH1-209ENST00000509277 FSTL3O95633 263 aa6.84□□□□□ -1.31
LIMCH1-209ENST00000509277 SPINK8P0C7L1 97 aa6.84□□□□□ -1.31
LIMCH1-209ENST00000509277 ZNF329Q86UD4 541 aa6.84□□□□□ -1.31
LIMCH1-209ENST00000509277 PPP1R27Q86WC6 154 aa6.84□□□□□ -1.31
LIMCH1-209ENST00000509277 NPFFR1Q9GZQ6 430 aa6.84□□□□□ -1.31
LIMCH1-209ENST00000509277 LINC00574Q9H8X3 128 aa6.84□□□□□ -1.31
LIMCH1-209ENST00000509277 TET2Q6N021 2002 aaPredicted RBP6.84□□□□□ -1.31
LIMCH1-209ENST00000509277 C15orf62A8K5M9 175 aa6.84□□□□□ -1.31
LIMCH1-209ENST00000509277 E7EUB6 86 aa6.84□□□□□ -1.31
LIMCH1-209ENST00000509277 NCR2O95944 276 aa6.84□□□□□ -1.31
LIMCH1-209ENST00000509277 RPL27AP46776 148 aaKnown RBP6.84□□□□□ -1.31
LIMCH1-209ENST00000509277 BLCAPP62952 87 aa6.84□□□□□ -1.31
LIMCH1-209ENST00000509277 BOD1L2Q8IYS8 172 aa6.84□□□□□ -1.31
LIMCH1-209ENST00000509277 LINC00311Q8N616 119 aa6.84□□□□□ -1.31
LIMCH1-209ENST00000509277 OSR1Q8TAX0 266 aaPredicted RBP6.84□□□□□ -1.31
LIMCH1-209ENST00000509277 WDR83OSQ9Y284 106 aa6.84□□□□□ -1.31
LIMCH1-209ENST00000509277 A0A096LNT2 108 aa6.84□□□□□ -1.32
LIMCH1-209ENST00000509277 IZUMO1RA6ND01 250 aa6.84□□□□□ -1.32
LIMCH1-209ENST00000509277 PGPA6NDG6 321 aa6.84□□□□□ -1.32
LIMCH1-209ENST00000509277 GGTLC3B5MD39 225 aa6.84□□□□□ -1.32
LIMCH1-209ENST00000509277 SRD5A1P18405 259 aa6.84□□□□□ -1.32
LIMCH1-209ENST00000509277 RHOGP84095 191 aa6.84□□□□□ -1.32
LIMCH1-209ENST00000509277 GDF5OSQ5U4N7 250 aa6.84□□□□□ -1.32
LIMCH1-209ENST00000509277 DDB2Q92466 427 aa6.84□□□□□ -1.32
LIMCH1-209ENST00000509277 ANAPC13Q9BS18 74 aa6.84□□□□□ -1.32
LIMCH1-209ENST00000509277 A0A1B0GW15 77 aa6.83□□□□□ -1.32
LIMCH1-209ENST00000509277 C2orf70A6NJV1 201 aa6.83□□□□□ -1.32
LIMCH1-209ENST00000509277 ODF3BA8MYP8 253 aa6.83□□□□□ -1.32
LIMCH1-209ENST00000509277 K7EP34 96 aa6.83□□□□□ -1.32
LIMCH1-209ENST00000509277 RBP4P02753 201 aa6.83□□□□□ -1.32
LIMCH1-209ENST00000509277 SMIM13P0DJ93 91 aa6.83□□□□□ -1.32
LIMCH1-209ENST00000509277 AREGP15514 252 aa6.83□□□□□ -1.32
LIMCH1-209ENST00000509277 HERV-K104P63124 156 aa6.83□□□□□ -1.32
LIMCH1-209ENST00000509277 MINOS1Q5TGZ0 78 aa6.83□□□□□ -1.32
LIMCH1-209ENST00000509277 PRNTQ86SH4 94 aa6.83□□□□□ -1.32
LIMCH1-209ENST00000509277 CITED1Q99966 193 aa6.83□□□□□ -1.32
LIMCH1-209ENST00000509277 C20orf78Q9BR46 151 aa6.83□□□□□ -1.32
LIMCH1-209ENST00000509277 KLK15Q9H2R5 256 aa6.83□□□□□ -1.32
LIMCH1-209ENST00000509277 SIGLEC9Q9Y336 463 aa6.83□□□□□ -1.32
LIMCH1-209ENST00000509277 MINOS1-NBL1R4GNA1 71 aa6.83□□□□□ -1.32
LIMCH1-209ENST00000509277 TRBV9A0A0B4J1U6 114 aa6.83□□□□□ -1.32
LIMCH1-209ENST00000509277 LINC01548A6NM66 108 aa6.83□□□□□ -1.32
LIMCH1-209ENST00000509277 G3V318 75 aa6.83□□□□□ -1.32
LIMCH1-209ENST00000509277 TIMM9Q9Y5J7 89 aa6.83□□□□□ -1.32
LIMCH1-209ENST00000509277 IGHV3OR16-8A0A075B7F1 116 aa6.82□□□□□ -1.32
LIMCH1-209ENST00000509277 C9orf118A6NHY6 69 aa6.82□□□□□ -1.32
LIMCH1-209ENST00000509277 SMKR1H3BMG3 65 aa6.82□□□□□ -1.32
LIMCH1-209ENST00000509277 OPRK1P41145 380 aa6.82□□□□□ -1.32
LIMCH1-209ENST00000509277 SYT8Q8NBV8 401 aa6.82□□□□□ -1.32
LIMCH1-209ENST00000509277 OR1L8Q8NGR8 309 aa6.82□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 93 ms