RNA–Protein interactions for RNA: ENST00000504430.5

NIPBL-204, Transcript of NIPBL, cohesin loading factor, humanhuman

TSL 2

Gene NIPBL, Length 3,455 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-204ENST00000504430 SPHKAPQ2M3C7 1700 aa3.4□□□□□ -1.86
NIPBL-204ENST00000504430 PTPRSQ13332 1948 aa3.4□□□□□ -1.86
NIPBL-204ENST00000504430 IGLC7A0M8Q6 106 aa3.4□□□□□ -1.86
NIPBL-204ENST00000504430 K7EM74 188 aa3.4□□□□□ -1.86
NIPBL-204ENST00000504430 COX7CP15954 63 aa3.4□□□□□ -1.86
NIPBL-204ENST00000504430 LCE4AQ5TA78 99 aa3.4□□□□□ -1.86
NIPBL-204ENST00000504430 CST11Q9H112 138 aa3.4□□□□□ -1.86
NIPBL-204ENST00000504430 DOCK1Q14185 1865 aa3.4□□□□□ -1.87
NIPBL-204ENST00000504430 LTBP1Q14766 1721 aa3.4□□□□□ -1.87
NIPBL-204ENST00000504430 RRBP1Q9P2E9 1410 aaKnown RBP3.4□□□□□ -1.87
NIPBL-204ENST00000504430 WISP3O95389 354 aaPredicted RBP3.4□□□□□ -1.87
NIPBL-204ENST00000504430 APCDD1LQ8NCL9 501 aa3.4□□□□□ -1.87
NIPBL-204ENST00000504430 ZNF355PQ9NSJ1 428 aa3.4□□□□□ -1.87
NIPBL-204ENST00000504430 ARHGAP5Q13017 1502 aa3.4□□□□□ -1.87
NIPBL-204ENST00000504430 TCF20Q9UGU0 1960 aaKnown RBP3.39□□□□□ -1.87
NIPBL-204ENST00000504430 TRBV24-1A0A075B6N3 115 aa3.39□□□□□ -1.87
NIPBL-204ENST00000504430 A0A0J9YWU9 116 aa3.39□□□□□ -1.87
NIPBL-204ENST00000504430 CYB5AP00167 134 aa3.39□□□□□ -1.87
NIPBL-204ENST00000504430 CBLN1P23435 193 aa3.39□□□□□ -1.87
NIPBL-204ENST00000504430 Q6ZQT7 251 aa3.39□□□□□ -1.87
NIPBL-204ENST00000504430 CCL4L1Q8NHW4 92 aa3.39□□□□□ -1.87
NIPBL-204ENST00000504430 KRTAP9-4Q9BYQ2 154 aa3.39□□□□□ -1.87
NIPBL-204ENST00000504430 WDR90Q96KV7 1748 aa3.39□□□□□ -1.87
NIPBL-204ENST00000504430 PLXNA3P51805 1871 aa3.39□□□□□ -1.87
NIPBL-204ENST00000504430 IGKV1D-42A0A075B6H8 117 aa3.39□□□□□ -1.87
NIPBL-204ENST00000504430 FAM24AA6NFZ4 105 aa3.39□□□□□ -1.87
NIPBL-204ENST00000504430 NUPR1O60356 82 aa3.39□□□□□ -1.87
NIPBL-204ENST00000504430 SFT2D2O95562 160 aa3.39□□□□□ -1.87
NIPBL-204ENST00000504430 ROMO1P60602 79 aa3.39□□□□□ -1.87
NIPBL-204ENST00000504430 ZCCHC23Q6ZST2 131 aa3.39□□□□□ -1.87
NIPBL-204ENST00000504430 Q6ZTC4 211 aa3.39□□□□□ -1.87
NIPBL-204ENST00000504430 KRTAP19-1Q8IUB9 90 aa3.39□□□□□ -1.87
NIPBL-204ENST00000504430 CYB561D1Q8N8Q1 229 aa3.39□□□□□ -1.87
NIPBL-204ENST00000504430 LINC01565O15544 149 aa3.39□□□□□ -1.87
NIPBL-204ENST00000504430 CLPSP04118 112 aa3.39□□□□□ -1.87
NIPBL-204ENST00000504430 Q8N8P6 123 aa3.39□□□□□ -1.87
NIPBL-204ENST00000504430 TMEM105Q8N8V8 129 aa3.39□□□□□ -1.87
NIPBL-204ENST00000504430 TAS2R4Q9NYW5 299 aa3.39□□□□□ -1.87
NIPBL-204ENST00000504430 TRPM3Q9HCF6 1732 aaPredicted RBP3.38□□□□□ -1.87
NIPBL-204ENST00000504430 ESPL1Q14674 2120 aa3.38□□□□□ -1.87
NIPBL-204ENST00000504430 IGHV3-15A0A0B4J1V0 119 aa3.38□□□□□ -1.87
NIPBL-204ENST00000504430 CREBL2O60519 120 aaPredicted RBP3.38□□□□□ -1.87
NIPBL-204ENST00000504430 PIRTP0C851 137 aa3.38□□□□□ -1.87
NIPBL-204ENST00000504430 TRAPPC2P0DI81 140 aa3.38□□□□□ -1.87
NIPBL-204ENST00000504430 TRAPPC2BP0DI82 140 aa3.38□□□□□ -1.87
NIPBL-204ENST00000504430 FAM27BQ5VT28 67 aa3.38□□□□□ -1.87
NIPBL-204ENST00000504430 C5orf67F2Z3F1 127 aa3.38□□□□□ -1.87
NIPBL-204ENST00000504430 FAUP35544 74 aaKnown RBP3.38□□□□□ -1.87
NIPBL-204ENST00000504430 IGLV3-21P80748 117 aaPredicted RBP3.38□□□□□ -1.87
NIPBL-204ENST00000504430 KRTAP1-3Q8IUG1 177 aa3.38□□□□□ -1.87
NIPBL-204ENST00000504430 OR2T35Q8NGX2 323 aa3.38□□□□□ -1.87
NIPBL-204ENST00000504430 HEATR1Q9H583 2144 aaKnown RBP3.38□□□□□ -1.87
NIPBL-204ENST00000504430 CASKIN1Q8WXD9 1431 aa3.38□□□□□ -1.87
NIPBL-204ENST00000504430 IGHV1-24A0A0C4DH33 117 aa3.38□□□□□ -1.87
NIPBL-204ENST00000504430 ZNF861PO60384 105 aa3.38□□□□□ -1.87
NIPBL-204ENST00000504430 KRTAP7-1Q8IUC3 87 aa3.38□□□□□ -1.87
NIPBL-204ENST00000504430 MYH8P13535 1937 aa3.38□□□□□ -1.87
NIPBL-204ENST00000504430 CRPP02741 224 aa3.37□□□□□ -1.87
NIPBL-204ENST00000504430 PTHLHP12272 177 aa3.37□□□□□ -1.87
NIPBL-204ENST00000504430 XCL1P47992 114 aa3.37□□□□□ -1.87
NIPBL-204ENST00000504430 MRPS36P82909 103 aaKnown RBP3.37□□□□□ -1.87
NIPBL-204ENST00000504430 DPPA3Q6W0C5 159 aa3.37□□□□□ -1.87
NIPBL-204ENST00000504430 Q6ZQT0 140 aa3.37□□□□□ -1.87
NIPBL-204ENST00000504430 SBSPONQ8IVN8 264 aa3.37□□□□□ -1.87
NIPBL-204ENST00000504430 ZNRD1Q9P1U0 126 aa3.37□□□□□ -1.87
NIPBL-204ENST00000504430 SMARCA4P51532 1647 aa3.37□□□□□ -1.87
NIPBL-204ENST00000504430 A0A1B0GW54 56 aa3.37□□□□□ -1.87
NIPBL-204ENST00000504430 C11orf86A6NJI1 115 aa3.37□□□□□ -1.87
NIPBL-204ENST00000504430 NPYP01303 97 aa3.37□□□□□ -1.87
NIPBL-204ENST00000504430 ZNF117Q03924 483 aa3.37□□□□□ -1.87
NIPBL-204ENST00000504430 S100A16Q96FQ6 103 aaKnown RBP3.37□□□□□ -1.87
NIPBL-204ENST00000504430 CGAP01215 116 aa3.36□□□□□ -1.87
NIPBL-204ENST00000504430 DNAH10OSP0CZ25 163 aa3.36□□□□□ -1.87
NIPBL-204ENST00000504430 VSTM2AQ8TAG5 236 aa3.36□□□□□ -1.87
NIPBL-204ENST00000504430 XAGE1AQ9HD64 81 aa3.36□□□□□ -1.87
NIPBL-204ENST00000504430 HYPMO75409 117 aa3.36□□□□□ -1.87
NIPBL-204ENST00000504430 MUC7Q8TAX7 377 aa3.36□□□□□ -1.87
NIPBL-204ENST00000504430 S100A13Q99584 98 aa3.36□□□□□ -1.87
NIPBL-204ENST00000504430 SMCO4Q9NRQ5 59 aa3.36□□□□□ -1.87
NIPBL-204ENST00000504430 UQCR10Q9UDW1 63 aa3.36□□□□□ -1.87
NIPBL-204ENST00000504430 KIDINS220Q9ULH0 1771 aa3.36□□□□□ -1.87
NIPBL-204ENST00000504430 TMEM235A6NFC5 223 aa3.36□□□□□ -1.87
NIPBL-204ENST00000504430 SPTSSAQ969W0 71 aa3.36□□□□□ -1.87
NIPBL-204ENST00000504430 RAB37Q96AX2 223 aa3.36□□□□□ -1.87
NIPBL-204ENST00000504430 THOC2Q8NI27 1593 aaKnown RBP3.36□□□□□ -1.87
NIPBL-204ENST00000504430 MYOFQ9NZM1 2061 aa3.35□□□□□ -1.87
NIPBL-204ENST00000504430 KRTAP9-7A8MTY7 169 aa3.35□□□□□ -1.87
NIPBL-204ENST00000504430 C19orf84I3L1E1 186 aa3.35□□□□□ -1.87
NIPBL-204ENST00000504430 LHBP01229 141 aa3.35□□□□□ -1.87
NIPBL-204ENST00000504430 MGST1P10620 155 aaKnown RBP3.35□□□□□ -1.87
NIPBL-204ENST00000504430 ATP11AUNQ6ZP68 121 aa3.35□□□□□ -1.87
NIPBL-204ENST00000504430 SH2D6Q7Z4S9 175 aa3.35□□□□□ -1.87
NIPBL-204ENST00000504430 AQP10Q96PS8 301 aa3.35□□□□□ -1.87
NIPBL-204ENST00000504430 KIAA0100Q14667 2235 aaKnown RBP3.35□□□□□ -1.87
NIPBL-204ENST00000504430 MAPKBP1O60336 1514 aa3.35□□□□□ -1.87
NIPBL-204ENST00000504430 MON2Q7Z3U7 1717 aa3.35□□□□□ -1.87
NIPBL-204ENST00000504430 SBF2Q86WG5 1849 aa3.35□□□□□ -1.87
NIPBL-204ENST00000504430 IGKV1D-17A0A075B6S4 117 aa3.35□□□□□ -1.87
NIPBL-204ENST00000504430 H3BQ85 93 aa3.35□□□□□ -1.87
NIPBL-204ENST00000504430 SDCBPO00560 298 aaPredicted RBP3.35□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 69.5 ms