RNA–Protein interactions for RNA: ENST00000504195.1

HMGB3P17-201, Transcript of high mobility group box 3 pseudogene 17, humanhuman

BASIC

Gene HMGB3P17, Length 649 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P17-201ENST00000504195 THSD7AQ9UPZ6 1657 aa1.44□□□□□ -2.18
HMGB3P17-201ENST00000504195 CPAMD8Q8IZJ3 1885 aa1.43□□□□□ -2.18
HMGB3P17-201ENST00000504195 SIPA1L2Q9P2F8 1722 aaPredicted RBP1.43□□□□□ -2.18
HMGB3P17-201ENST00000504195 TSC2P49815 1807 aa1.43□□□□□ -2.18
HMGB3P17-201ENST00000504195 LAMA4Q16363 1823 aa1.43□□□□□ -2.18
HMGB3P17-201ENST00000504195 TRAV2A0A0B4J234 112 aa1.43□□□□□ -2.18
HMGB3P17-201ENST00000504195 TRAV17A0A0B4J275 112 aa1.43□□□□□ -2.18
HMGB3P17-201ENST00000504195 A0A1B0GW54 56 aa1.43□□□□□ -2.18
HMGB3P17-201ENST00000504195 FAM168BA1KXE4 195 aa1.43□□□□□ -2.18
HMGB3P17-201ENST00000504195 RBAKDNA6NC62 111 aa1.43□□□□□ -2.18
HMGB3P17-201ENST00000504195 C2orf70A6NJV1 201 aa1.43□□□□□ -2.18
HMGB3P17-201ENST00000504195 IGLL5B9A064 214 aa1.43□□□□□ -2.18
HMGB3P17-201ENST00000504195 PSPHP1O15172 72 aa1.43□□□□□ -2.18
HMGB3P17-201ENST00000504195 HLA-DQA1P01909 254 aa1.43□□□□□ -2.18
HMGB3P17-201ENST00000504195 PRH1P02810 166 aa1.43□□□□□ -2.18
HMGB3P17-201ENST00000504195 CD55P08174 381 aa1.43□□□□□ -2.18
HMGB3P17-201ENST00000504195 LMO2P25791 158 aa1.43□□□□□ -2.18
HMGB3P17-201ENST00000504195 AQP1P29972 269 aa1.43□□□□□ -2.18
HMGB3P17-201ENST00000504195 LIM2P55344 173 aa1.43□□□□□ -2.18
HMGB3P17-201ENST00000504195 CCL23P55773 120 aa1.43□□□□□ -2.18
HMGB3P17-201ENST00000504195 SMIM11AP58511 58 aa1.43□□□□□ -2.18
HMGB3P17-201ENST00000504195 RPL30P62888 115 aaKnown RBP1.43□□□□□ -2.18
HMGB3P17-201ENST00000504195 FUT5Q11128 374 aa1.43□□□□□ -2.18
HMGB3P17-201ENST00000504195 WFDC2Q14508 124 aa1.43□□□□□ -2.18
HMGB3P17-201ENST00000504195 KIAA0087Q14695 138 aa1.43□□□□□ -2.18
HMGB3P17-201ENST00000504195 ZNF791Q3KP31 576 aaPredicted RBP1.43□□□□□ -2.18
HMGB3P17-201ENST00000504195 FBXL19-AS1Q494R0 122 aa1.43□□□□□ -2.18
HMGB3P17-201ENST00000504195 CENPWQ5EE01 88 aa1.43□□□□□ -2.18
HMGB3P17-201ENST00000504195 DEFB121Q5J5C9 76 aa1.43□□□□□ -2.18
HMGB3P17-201ENST00000504195 MIC13Q5XKP0 118 aa1.43□□□□□ -2.18
HMGB3P17-201ENST00000504195 CLEC19AQ6UXS0 136 aa1.43□□□□□ -2.18
HMGB3P17-201ENST00000504195 ZCCHC23Q6ZST2 131 aa1.43□□□□□ -2.18
HMGB3P17-201ENST00000504195 HMGN2P46Q86SG4 172 aa1.43□□□□□ -2.18
HMGB3P17-201ENST00000504195 WDR86Q86TI4 376 aa1.43□□□□□ -2.18
HMGB3P17-201ENST00000504195 LINC00643Q86TS7 51 aa1.43□□□□□ -2.18
HMGB3P17-201ENST00000504195 CEND1Q8N111 149 aa1.43□□□□□ -2.18
HMGB3P17-201ENST00000504195 ZCCHC24Q8N2G6 241 aaKnown RBP1.43□□□□□ -2.18
HMGB3P17-201ENST00000504195 TMEM256Q8N2U0 113 aa1.43□□□□□ -2.18
HMGB3P17-201ENST00000504195 SLC22A24Q8N4F4 322 aa1.43□□□□□ -2.18
HMGB3P17-201ENST00000504195 SERP2Q8N6R1 65 aa1.43□□□□□ -2.18
HMGB3P17-201ENST00000504195 LRTM2Q8N967 370 aa1.43□□□□□ -2.18
HMGB3P17-201ENST00000504195 MORN4Q8NDC4 146 aa1.43□□□□□ -2.18
HMGB3P17-201ENST00000504195 OR5C1Q8NGR4 320 aa1.43□□□□□ -2.18
HMGB3P17-201ENST00000504195 FAM57AQ8TBR7 257 aa1.43□□□□□ -2.18
HMGB3P17-201ENST00000504195 TSKUQ8WUA8 353 aa1.43□□□□□ -2.18
HMGB3P17-201ENST00000504195 BRK1Q8WUW1 75 aa1.43□□□□□ -2.18
HMGB3P17-201ENST00000504195 TMEM158Q8WZ71 300 aa1.43□□□□□ -2.18
HMGB3P17-201ENST00000504195 H1FXQ92522 213 aaKnown RBP1.43□□□□□ -2.18
HMGB3P17-201ENST00000504195 CHCHD1Q96BP2 118 aaKnown RBP1.43□□□□□ -2.18
HMGB3P17-201ENST00000504195 ZNF799Q96GE5 643 aa1.43□□□□□ -2.18
HMGB3P17-201ENST00000504195 SLC25A2Q9BXI2 301 aa1.43□□□□□ -2.18
HMGB3P17-201ENST00000504195 DPH3P1Q9H4G8 78 aa1.43□□□□□ -2.18
HMGB3P17-201ENST00000504195 ZNF286AQ9HBT8 521 aa1.43□□□□□ -2.18
HMGB3P17-201ENST00000504195 DYNLRB1Q9NP97 96 aa1.43□□□□□ -2.18
HMGB3P17-201ENST00000504195 CALYQ9NYX4 217 aa1.43□□□□□ -2.18
HMGB3P17-201ENST00000504195 LINC00527Q9UJ94 153 aa1.43□□□□□ -2.18
HMGB3P17-201ENST00000504195 ANAPC10Q9UM13 185 aa1.43□□□□□ -2.18
HMGB3P17-201ENST00000504195 GBF1Q92538 1859 aa1.43□□□□□ -2.18
HMGB3P17-201ENST00000504195 RAI1Q7Z5J4 1906 aaPredicted RBP1.42□□□□□ -2.18
HMGB3P17-201ENST00000504195 DEPDC5O75140 1603 aa1.42□□□□□ -2.18
HMGB3P17-201ENST00000504195 LRP6O75581 1613 aa1.42□□□□□ -2.18
HMGB3P17-201ENST00000504195 IGLV3-22A0A075B6J6 115 aa1.42□□□□□ -2.18
HMGB3P17-201ENST00000504195 TRAV8-3A0A0A6YYJ7 113 aa1.42□□□□□ -2.18
HMGB3P17-201ENST00000504195 IGKV6-21A0A0C4DH24 114 aa1.42□□□□□ -2.18
HMGB3P17-201ENST00000504195 IGHV3-20A0A0C4DH32 117 aa1.42□□□□□ -2.18
HMGB3P17-201ENST00000504195 A0A0J9YW62 118 aa1.42□□□□□ -2.18
HMGB3P17-201ENST00000504195 LOC100131303A0A0U1RQF7 123 aa1.42□□□□□ -2.18
HMGB3P17-201ENST00000504195 GRIFINA4D1Z8 144 aa1.42□□□□□ -2.18
HMGB3P17-201ENST00000504195 HBDP02042 147 aa1.42□□□□□ -2.18
HMGB3P17-201ENST00000504195 TCRAP04437 139 aa1.42□□□□□ -2.18
HMGB3P17-201ENST00000504195 CD7P09564 240 aa1.42□□□□□ -2.18
HMGB3P17-201ENST00000504195 ASAH2BP0C7U1 165 aa1.42□□□□□ -2.18
HMGB3P17-201ENST00000504195 CSN1S1P47710 185 aa1.42□□□□□ -2.18
HMGB3P17-201ENST00000504195 MFAP2P55001 183 aa1.42□□□□□ -2.18
HMGB3P17-201ENST00000504195 RPL23P62829 140 aaKnown RBP1.42□□□□□ -2.18
HMGB3P17-201ENST00000504195 CACNG7P62955 275 aa1.42□□□□□ -2.18
HMGB3P17-201ENST00000504195 UBE2BP63146 152 aa1.42□□□□□ -2.18
HMGB3P17-201ENST00000504195 HBBP68871 147 aa1.42□□□□□ -2.18
HMGB3P17-201ENST00000504195 CXCL6P80162 114 aa1.42□□□□□ -2.18
HMGB3P17-201ENST00000504195 IGLV3-21P80748 117 aaPredicted RBP1.42□□□□□ -2.18
HMGB3P17-201ENST00000504195 ELOCQ15369 112 aa1.42□□□□□ -2.18
HMGB3P17-201ENST00000504195 ASB16-AS1Q495Z4 193 aa1.42□□□□□ -2.18
HMGB3P17-201ENST00000504195 TMEM52BQ4KMG9 183 aa1.42□□□□□ -2.18
HMGB3P17-201ENST00000504195 ABCA11PQ4W5N1 156 aa1.42□□□□□ -2.18
HMGB3P17-201ENST00000504195 CLLU1OSQ5K130 101 aa1.42□□□□□ -2.18
HMGB3P17-201ENST00000504195 FAM120AOSQ5T036 256 aa1.42□□□□□ -2.18
HMGB3P17-201ENST00000504195 C9orf66Q5T8R8 295 aa1.42□□□□□ -2.18
HMGB3P17-201ENST00000504195 FAM222AQ5U5X8 452 aa1.42□□□□□ -2.18
HMGB3P17-201ENST00000504195 FAM219BQ5XKK7 198 aa1.42□□□□□ -2.18
HMGB3P17-201ENST00000504195 FAM104BQ5XKR9 115 aa1.42□□□□□ -2.18
HMGB3P17-201ENST00000504195 C11orf71Q6IPW1 123 aa1.42□□□□□ -2.18
HMGB3P17-201ENST00000504195 NOXRED1Q6NXP6 359 aa1.42□□□□□ -2.18
HMGB3P17-201ENST00000504195 EBLN2Q6P2I7 272 aa1.42□□□□□ -2.18
HMGB3P17-201ENST00000504195 SDIM1Q6ZPB5 146 aa1.42□□□□□ -2.18
HMGB3P17-201ENST00000504195 Q6ZVQ6 151 aa1.42□□□□□ -2.18
HMGB3P17-201ENST00000504195 LCA10Q71F78 164 aa1.42□□□□□ -2.18
HMGB3P17-201ENST00000504195 C5orf38Q86SI9 138 aa1.42□□□□□ -2.18
HMGB3P17-201ENST00000504195 RPP25LQ8N5L8 163 aaKnown RBP1.42□□□□□ -2.18
HMGB3P17-201ENST00000504195 SLC25A29Q8N8R3 303 aa1.42□□□□□ -2.18
HMGB3P17-201ENST00000504195 FAM213BQ8TBF2 198 aa1.42□□□□□ -2.18
Retrieved 100 of 20,778 RNA–protein pairs in 176.4 ms