RNA–Protein interactions for RNA: ENST00000504131.6

CLCN3-204, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 5 BASIC

Gene CLCN3, Length 5,592 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-204ENST00000504131 TFF2Q03403 129 aa4.91□□□□□ -1.62
CLCN3-204ENST00000504131 DEFB134Q4QY38 66 aa4.91□□□□□ -1.62
CLCN3-204ENST00000504131 LINC01465Q8N7H1 131 aa4.91□□□□□ -1.62
CLCN3-204ENST00000504131 WFDC5Q8TCV5 224 aa4.91□□□□□ -1.62
CLCN3-204ENST00000504131 C6orf106Q9H6K1 298 aaPredicted RBP4.91□□□□□ -1.62
CLCN3-204ENST00000504131 CGAP01215 116 aa4.91□□□□□ -1.62
CLCN3-204ENST00000504131 ZNF492Q9P255 531 aa4.91□□□□□ -1.62
CLCN3-204ENST00000504131 C2orf70A6NJV1 201 aa4.91□□□□□ -1.62
CLCN3-204ENST00000504131 LINC01565O15544 149 aa4.91□□□□□ -1.62
CLCN3-204ENST00000504131 PPP1R17O96001 155 aa4.91□□□□□ -1.62
CLCN3-204ENST00000504131 FOXF1Q12946 379 aa4.91□□□□□ -1.62
CLCN3-204ENST00000504131 ZNF726P1Q15940 193 aa4.91□□□□□ -1.62
CLCN3-204ENST00000504131 IGFBP7Q16270 282 aa4.91□□□□□ -1.62
CLCN3-204ENST00000504131 DEFB126Q9BYW3 111 aa4.91□□□□□ -1.62
CLCN3-204ENST00000504131 SLC25A16P16260 332 aa4.91□□□□□ -1.62
CLCN3-204ENST00000504131 XCL1P47992 114 aa4.91□□□□□ -1.62
CLCN3-204ENST00000504131 PRR20EP86478 221 aa4.91□□□□□ -1.62
CLCN3-204ENST00000504131 PRR20CP86479 221 aa4.91□□□□□ -1.62
CLCN3-204ENST00000504131 PRR20DP86480 221 aa4.91□□□□□ -1.62
CLCN3-204ENST00000504131 PRR20BP86481 221 aa4.91□□□□□ -1.62
CLCN3-204ENST00000504131 PRR20AP86496 221 aa4.91□□□□□ -1.62
CLCN3-204ENST00000504131 CASC2Q6XLA1 102 aa4.91□□□□□ -1.62
CLCN3-204ENST00000504131 ZNF826PQ6ZT77 177 aa4.91□□□□□ -1.62
CLCN3-204ENST00000504131 CCL13Q99616 98 aa4.91□□□□□ -1.62
CLCN3-204ENST00000504131 XCL2Q9UBD3 114 aa4.91□□□□□ -1.62
CLCN3-204ENST00000504131 K7EM74 188 aa4.91□□□□□ -1.62
CLCN3-204ENST00000504131 M0R1W7 72 aa4.91□□□□□ -1.62
CLCN3-204ENST00000504131 PIN1P1O15428 100 aa4.91□□□□□ -1.62
CLCN3-204ENST00000504131 SH2D1AO60880 128 aa4.91□□□□□ -1.62
CLCN3-204ENST00000504131 PRM2P04554 102 aa4.91□□□□□ -1.62
CLCN3-204ENST00000504131 RLFQ13129 1914 aa4.9□□□□□ -1.62
CLCN3-204ENST00000504131 DPTQ07507 201 aa4.9□□□□□ -1.62
CLCN3-204ENST00000504131 LRCOL1A6NCL2 159 aa4.9□□□□□ -1.62
CLCN3-204ENST00000504131 MBD6Q96DN6 1003 aa4.9□□□□□ -1.62
CLCN3-204ENST00000504131 TFF3Q07654 80 aa4.9□□□□□ -1.63
CLCN3-204ENST00000504131 Q6ZVQ6 151 aa4.9□□□□□ -1.63
CLCN3-204ENST00000504131 Q8N976 141 aa4.9□□□□□ -1.63
CLCN3-204ENST00000504131 ATG2BQ96BY7 2078 aa4.9□□□□□ -1.63
CLCN3-204ENST00000504131 IGLV3-10A0A075B6K4 115 aa4.9□□□□□ -1.63
CLCN3-204ENST00000504131 C10orf113Q5VZT2 155 aa4.9□□□□□ -1.63
CLCN3-204ENST00000504131 ZNF329Q86UD4 541 aa4.9□□□□□ -1.63
CLCN3-204ENST00000504131 PRR26Q8N8Z3 221 aa4.9□□□□□ -1.63
CLCN3-204ENST00000504131 PSPNO60542 156 aa4.89□□□□□ -1.63
CLCN3-204ENST00000504131 PROP1O75360 226 aa4.89□□□□□ -1.63
CLCN3-204ENST00000504131 TMEM133Q9H2Q1 129 aa4.89□□□□□ -1.63
CLCN3-204ENST00000504131 IGHV1OR15-1A0A075B7D0 117 aa4.89□□□□□ -1.63
CLCN3-204ENST00000504131 IGLV3-25P01717 112 aa4.89□□□□□ -1.63
CLCN3-204ENST00000504131 CRYBA2P53672 197 aa4.89□□□□□ -1.63
CLCN3-204ENST00000504131 ODF3L1Q8IXM7 274 aa4.89□□□□□ -1.63
CLCN3-204ENST00000504131 RPP25LQ8N5L8 163 aaKnown RBP4.89□□□□□ -1.63
CLCN3-204ENST00000504131 V9GYV3 84 aa4.89□□□□□ -1.63
CLCN3-204ENST00000504131 LRRC37A2A6NM11 1700 aa4.89□□□□□ -1.63
CLCN3-204ENST00000504131 A0A0G2JNJ9 132 aa4.89□□□□□ -1.63
CLCN3-204ENST00000504131 DEFB133Q30KQ1 61 aa4.89□□□□□ -1.63
CLCN3-204ENST00000504131 Q9UFV3 132 aa4.89□□□□□ -1.63
CLCN3-204ENST00000504131 NUP205Q92621 2012 aa4.89□□□□□ -1.63
CLCN3-204ENST00000504131 TRPM7Q96QT4 1865 aa4.89□□□□□ -1.63
CLCN3-204ENST00000504131 CXorf51AA0A1B0GTR3 108 aa4.89□□□□□ -1.63
CLCN3-204ENST00000504131 ESRGQ1W209 222 aa4.89□□□□□ -1.63
CLCN3-204ENST00000504131 C18orf12Q96KH6 178 aa4.89□□□□□ -1.63
CLCN3-204ENST00000504131 A0A087WZ39 114 aa4.89□□□□□ -1.63
CLCN3-204ENST00000504131 MLANAQ16655 118 aa4.89□□□□□ -1.63
CLCN3-204ENST00000504131 C7orf65Q6ZTY9 151 aa4.89□□□□□ -1.63
CLCN3-204ENST00000504131 ZNF503Q96F45 646 aa4.89□□□□□ -1.63
CLCN3-204ENST00000504131 PRR15LQ9BU68 103 aa4.89□□□□□ -1.63
CLCN3-204ENST00000504131 PDE4DIPQ5VU43 2346 aa4.88□□□□□ -1.63
CLCN3-204ENST00000504131 TRBV7-1A0A0A6YYK4 115 aa4.88□□□□□ -1.63
CLCN3-204ENST00000504131 SMIM27A0A1W2PRY6 76 aa4.88□□□□□ -1.63
CLCN3-204ENST00000504131 Q5XG85 94 aa4.88□□□□□ -1.63
CLCN3-204ENST00000504131 RETNLBQ9BQ08 111 aa4.88□□□□□ -1.63
CLCN3-204ENST00000504131 TIMM21Q9BVV7 248 aa4.88□□□□□ -1.63
CLCN3-204ENST00000504131 CCL28Q9NRJ3 127 aa4.88□□□□□ -1.63
CLCN3-204ENST00000504131 TP53TG3Q9ULZ0 132 aa4.88□□□□□ -1.63
CLCN3-204ENST00000504131 KIAA2026Q5HYC2 2103 aa4.88□□□□□ -1.63
CLCN3-204ENST00000504131 MIA3Q5JRA6 1907 aa4.88□□□□□ -1.63
CLCN3-204ENST00000504131 ZNF106Q9H2Y7 1883 aaKnown RBP4.88□□□□□ -1.63
CLCN3-204ENST00000504131 PRR32B1ATL7 298 aa4.88□□□□□ -1.63
CLCN3-204ENST00000504131 C8orf87E5RJ46 101 aa4.88□□□□□ -1.63
CLCN3-204ENST00000504131 CD24P25063 80 aa4.88□□□□□ -1.63
CLCN3-204ENST00000504131 LINC00205P59089 165 aa4.88□□□□□ -1.63
CLCN3-204ENST00000504131 RNASE13Q5GAN3 156 aaKnown RBP4.88□□□□□ -1.63
CLCN3-204ENST00000504131 LINC00269Q8N2A0 174 aa4.88□□□□□ -1.63
CLCN3-204ENST00000504131 TTTY13Q9BZ97 58 aa4.88□□□□□ -1.63
CLCN3-204ENST00000504131 SCN5AQ14524 2016 aa4.88□□□□□ -1.63
CLCN3-204ENST00000504131 ARID1AO14497 2285 aa4.88□□□□□ -1.63
CLCN3-204ENST00000504131 TRBV5-5A0A0J9YX44 114 aa4.88□□□□□ -1.63
CLCN3-204ENST00000504131 DEFB124Q8NES8 71 aa4.88□□□□□ -1.63
CLCN3-204ENST00000504131 PHLDA1Q8WV24 401 aaPredicted RBP4.88□□□□□ -1.63
CLCN3-204ENST00000504131 POLR2AP24928 1970 aaKnown RBP4.88□□□□□ -1.63
CLCN3-204ENST00000504131 PGLYRP1O75594 196 aaPredicted RBP4.88□□□□□ -1.63
CLCN3-204ENST00000504131 IGHV1-8P0DP01 117 aa4.88□□□□□ -1.63
CLCN3-204ENST00000504131 MRPL51Q4U2R6 128 aaKnown RBP4.88□□□□□ -1.63
CLCN3-204ENST00000504131 ICOSQ9Y6W8 199 aa4.88□□□□□ -1.63
CLCN3-204ENST00000504131 K7ERS5 55 aa4.87□□□□□ -1.63
CLCN3-204ENST00000504131 NDPQ00604 133 aa4.87□□□□□ -1.63
CLCN3-204ENST00000504131 CFHR3Q02985 330 aa4.87□□□□□ -1.63
CLCN3-204ENST00000504131 PIK3CD-AS1Q5SR53 167 aa4.87□□□□□ -1.63
CLCN3-204ENST00000504131 NDUFA11Q86Y39 141 aa4.87□□□□□ -1.63
CLCN3-204ENST00000504131 FGFBP3Q8TAT2 258 aa4.87□□□□□ -1.63
CLCN3-204ENST00000504131 IGHV3-64A0A075B6Q5 118 aa4.87□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 89.9 ms