RNA–Protein interactions for RNA: ENST00000498739.1

PRKCB-210, Transcript of protein kinase C beta, humanhuman

TSL 4

Gene PRKCB, Length 569 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCB-210ENST00000498739 VGLL1Q99990 258 aa12.1□□□□□ -0.47
PRKCB-210ENST00000498739 SMIM9A6NGZ8 99 aa12.09□□□□□ -0.47
PRKCB-210ENST00000498739 FGF8P55075 233 aaPredicted RBP12.09□□□□□ -0.47
PRKCB-210ENST00000498739 PMS2P11Q13670 270 aa12.09□□□□□ -0.47
PRKCB-210ENST00000498739 ZFP69Q49AA0 526 aa12.09□□□□□ -0.47
PRKCB-210ENST00000498739 C9orf47Q6ZRZ4 202 aa12.09□□□□□ -0.47
PRKCB-210ENST00000498739 C11orf45Q8TAV5 145 aa12.09□□□□□ -0.47
PRKCB-210ENST00000498739 SUN5Q8TC36 379 aa12.09□□□□□ -0.47
PRKCB-210ENST00000498739 PLA2G2EQ9NZK7 142 aa12.09□□□□□ -0.47
PRKCB-210ENST00000498739 MAP1LC3B2A6NCE7 125 aa12.08□□□□□ -0.48
PRKCB-210ENST00000498739 UMAD1C9J7I0 102 aa12.08□□□□□ -0.48
PRKCB-210ENST00000498739 DIRC3C9JPN6 131 aa12.08□□□□□ -0.48
PRKCB-210ENST00000498739 SLC25A5P05141 298 aaKnown RBP12.08□□□□□ -0.48
PRKCB-210ENST00000498739 FHITP49789 147 aa12.08□□□□□ -0.48
PRKCB-210ENST00000498739 RRN3P1Q2M238 152 aa12.08□□□□□ -0.48
PRKCB-210ENST00000498739 GFI1BQ5VTD9 330 aa12.08□□□□□ -0.48
PRKCB-210ENST00000498739 STOML3Q8TAV4 291 aa12.08□□□□□ -0.48
PRKCB-210ENST00000498739 TMED6Q8WW62 240 aa12.08□□□□□ -0.48
PRKCB-210ENST00000498739 LINC01587Q99440 93 aa12.08□□□□□ -0.48
PRKCB-210ENST00000498739 MAP1LC3BQ9GZQ8 125 aa12.08□□□□□ -0.48
PRKCB-210ENST00000498739 TMPRSS5Q9H3S3 457 aa12.08□□□□□ -0.48
PRKCB-210ENST00000498739 LOC102723971A0A1B0GUV8 181 aa12.07□□□□□ -0.48
PRKCB-210ENST00000498739 RBAKDNA6NC62 111 aa12.07□□□□□ -0.48
PRKCB-210ENST00000498739 CXorf65A6NEN9 183 aa12.07□□□□□ -0.48
PRKCB-210ENST00000498739 ZNF705GA8MUZ8 300 aaPredicted RBP12.07□□□□□ -0.48
PRKCB-210ENST00000498739 ZNF138P52744 262 aa12.07□□□□□ -0.48
PRKCB-210ENST00000498739 EMP1P54849 157 aa12.07□□□□□ -0.48
PRKCB-210ENST00000498739 GNG5P63218 68 aa12.07□□□□□ -0.48
PRKCB-210ENST00000498739 TMEM256Q8N2U0 113 aa12.07□□□□□ -0.48
PRKCB-210ENST00000498739 Q8TAT8 98 aa12.07□□□□□ -0.48
PRKCB-210ENST00000498739 FAM213BQ8TBF2 198 aa12.07□□□□□ -0.48
PRKCB-210ENST00000498739 ZNF492Q9P255 531 aa12.07□□□□□ -0.48
PRKCB-210ENST00000498739 DNAH7Q8WXX0 4024 aa12.07□□□□□ -0.48
PRKCB-210ENST00000498739 TMEM189A5PLL7 270 aa12.06□□□□□ -0.48
PRKCB-210ENST00000498739 NANOS2P60321 138 aaKnown RBP12.06□□□□□ -0.48
PRKCB-210ENST00000498739 GOLT1AQ6ZVE7 132 aa12.06□□□□□ -0.48
PRKCB-210ENST00000498739 C9orf62Q8N4C0 152 aa12.06□□□□□ -0.48
PRKCB-210ENST00000498739 FAM19A4Q96LR4 140 aa12.06□□□□□ -0.48
PRKCB-210ENST00000498739 C20orf144Q9BQM9 153 aa12.06□□□□□ -0.48
PRKCB-210ENST00000498739 TRAV12-3A0A0B4J271 114 aa12.05□□□□□ -0.48
PRKCB-210ENST00000498739 PRM2P04554 102 aa12.05□□□□□ -0.48
PRKCB-210ENST00000498739 HTN1P15515 57 aa12.05□□□□□ -0.48
PRKCB-210ENST00000498739 UBE2G2P60604 165 aa12.05□□□□□ -0.48
PRKCB-210ENST00000498739 SUMO1P63165 101 aaKnown RBP12.05□□□□□ -0.48
PRKCB-210ENST00000498739 SLC51BQ86UW2 128 aa12.05□□□□□ -0.48
PRKCB-210ENST00000498739 ARL6IP6Q8N6S5 226 aa12.05□□□□□ -0.48
PRKCB-210ENST00000498739 C5orf17Q8NAS9 161 aa12.05□□□□□ -0.48
PRKCB-210ENST00000498739 CELA1Q9UNI1 258 aa12.05□□□□□ -0.48
PRKCB-210ENST00000498739 A0A1W2PRE2 83 aa12.04□□□□□ -0.48
PRKCB-210ENST00000498739 C7orf71A4D174 169 aa12.04□□□□□ -0.48
PRKCB-210ENST00000498739 KLLNB2CW77 178 aa12.04□□□□□ -0.48
PRKCB-210ENST00000498739 GGTLC3B5MD39 225 aa12.04□□□□□ -0.48
PRKCB-210ENST00000498739 H7BYZ3 331 aa12.04□□□□□ -0.48
PRKCB-210ENST00000498739 GPX1P07203 203 aa12.04□□□□□ -0.48
PRKCB-210ENST00000498739 CRISP2P16562 243 aa12.04□□□□□ -0.48
PRKCB-210ENST00000498739 TAS2R60P59551 318 aa12.04□□□□□ -0.48
PRKCB-210ENST00000498739 BTN1A1Q13410 526 aa12.04□□□□□ -0.48
PRKCB-210ENST00000498739 EIF5AL1Q6IS14 154 aaKnown RBP12.04□□□□□ -0.48
PRKCB-210ENST00000498739 DPPA3Q6W0C5 159 aa12.04□□□□□ -0.48
PRKCB-210ENST00000498739 NIPSNAP3BQ9BS92 247 aa12.04□□□□□ -0.48
PRKCB-210ENST00000498739 YTHDF2Q9Y5A9 579 aaKnown RBP12.04□□□□□ -0.48
PRKCB-210ENST00000498739 A0A1B0GV50 99 aa12.03□□□□□ -0.48
PRKCB-210ENST00000498739 RNASE4P34096 147 aaKnown RBP12.03□□□□□ -0.48
PRKCB-210ENST00000498739 ZFAND2AQ8N6M9 145 aa12.03□□□□□ -0.48
PRKCB-210ENST00000498739 SFT2D1Q8WV19 159 aa12.03□□□□□ -0.48
PRKCB-210ENST00000498739 TRAV8-1A0A0A6YYK1 113 aa12.02□□□□□ -0.49
PRKCB-210ENST00000498739 SERTM2A0A1B0GWG4 89 aa12.02□□□□□ -0.49
PRKCB-210ENST00000498739 TCRAP04437 139 aa12.02□□□□□ -0.49
PRKCB-210ENST00000498739 NMBP08949 121 aa12.02□□□□□ -0.49
PRKCB-210ENST00000498739 H2AFB1P0C5Y9 115 aa12.02□□□□□ -0.49
PRKCB-210ENST00000498739 AZU1P20160 251 aa12.02□□□□□ -0.49
PRKCB-210ENST00000498739 PRR9Q5T870 116 aa12.02□□□□□ -0.49
PRKCB-210ENST00000498739 PHLDA1Q8WV24 401 aaPredicted RBP12.02□□□□□ -0.49
PRKCB-210ENST00000498739 MBD3L1Q8WWY6 194 aa12.02□□□□□ -0.49
PRKCB-210ENST00000498739 EPDR1Q9UM22 224 aa12.02□□□□□ -0.49
PRKCB-210ENST00000498739 TRBV7-9A0A0J9YWB2 115 aa12.01□□□□□ -0.49
PRKCB-210ENST00000498739 NUPR2A6NF83 97 aa12.01□□□□□ -0.49
PRKCB-210ENST00000498739 FAM74A7A6NL05 159 aa12.01□□□□□ -0.49
PRKCB-210ENST00000498739 K7EQM0 130 aa12.01□□□□□ -0.49
PRKCB-210ENST00000498739 IFNA7P01567 189 aa12.01□□□□□ -0.49
PRKCB-210ENST00000498739 SPART-AS1P0CW21 52 aa12.01□□□□□ -0.49
PRKCB-210ENST00000498739 NKX2-5P52952 324 aaPredicted RBP12.01□□□□□ -0.49
PRKCB-210ENST00000498739 ZNF767PQ75MW2 155 aa12.01□□□□□ -0.49
PRKCB-210ENST00000498739 SGK494Q96LW2 274 aa12.01□□□□□ -0.49
PRKCB-210ENST00000498739 LENEPQ9Y5L5 61 aa12.01□□□□□ -0.49
PRKCB-210ENST00000498739 RAB5CP51148 216 aa12□□□□□ -0.49
PRKCB-210ENST00000498739 FAM222AQ5U5X8 452 aa12□□□□□ -0.49
PRKCB-210ENST00000498739 CEMP1Q6PRD7 247 aaPredicted RBP12□□□□□ -0.49
PRKCB-210ENST00000498739 Q6ZTC4 211 aa12□□□□□ -0.49
PRKCB-210ENST00000498739 CCDC28AQ8IWP9 274 aa12□□□□□ -0.49
PRKCB-210ENST00000498739 CYB561D1Q8N8Q1 229 aa12□□□□□ -0.49
PRKCB-210ENST00000498739 C16orf74Q96GX8 76 aa12□□□□□ -0.49
PRKCB-210ENST00000498739 PYGO2Q9BRQ0 406 aa12□□□□□ -0.49
PRKCB-210ENST00000498739 DKK2Q9UBU2 259 aa12□□□□□ -0.49
PRKCB-210ENST00000498739 TEX48A0A1B0GUV7 120 aa11.99□□□□□ -0.49
PRKCB-210ENST00000498739 ZNF324O75467 553 aaPredicted RBP11.99□□□□□ -0.49
PRKCB-210ENST00000498739 SULT1A2P50226 295 aa11.99□□□□□ -0.49
PRKCB-210ENST00000498739 C12orf74Q32Q52 190 aa11.99□□□□□ -0.49
PRKCB-210ENST00000498739 TMEM263Q8WUH6 116 aaKnown RBP11.99□□□□□ -0.49
PRKCB-210ENST00000498739 ATG101Q9BSB4 218 aa11.99□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 89.3 ms