RNA–Protein interactions for RNA: ENST00000497960.5

NUP50-219, Transcript of nucleoporin 50, humanhuman

TSL 2

Gene NUP50, Length 986 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-219ENST00000497960 ZNF705FA8MVS1 300 aaPredicted RBP11.05□□□□□ -0.64
NUP50-219ENST00000497960 M0R3E3 92 aa11.05□□□□□ -0.64
NUP50-219ENST00000497960 RANP62826 216 aaKnown RBP11.05□□□□□ -0.64
NUP50-219ENST00000497960 LYPD1Q8N2G4 141 aa11.05□□□□□ -0.64
NUP50-219ENST00000497960 TRAV10A0A0B4J240 114 aa11.04□□□□□ -0.64
NUP50-219ENST00000497960 TMEM189A5PLL7 270 aa11.04□□□□□ -0.64
NUP50-219ENST00000497960 AMBPP02760 352 aa11.04□□□□□ -0.64
NUP50-219ENST00000497960 H2AFB1P0C5Y9 115 aa11.04□□□□□ -0.64
NUP50-219ENST00000497960 ZNF705DP0CH99 300 aaPredicted RBP11.04□□□□□ -0.64
NUP50-219ENST00000497960 ZNF705BP0CI00 300 aaPredicted RBP11.04□□□□□ -0.64
NUP50-219ENST00000497960 CSN1S1P47710 185 aa11.04□□□□□ -0.64
NUP50-219ENST00000497960 CNN1P51911 297 aaKnown RBP11.04□□□□□ -0.64
NUP50-219ENST00000497960 TCTAP57738 103 aa11.04□□□□□ -0.64
NUP50-219ENST00000497960 OR8A1Q8NGG7 326 aa11.04□□□□□ -0.64
NUP50-219ENST00000497960 OR10J6PQ8NGY7 276 aa11.04□□□□□ -0.64
NUP50-219ENST00000497960 SFT2D1Q8WV19 159 aa11.04□□□□□ -0.64
NUP50-219ENST00000497960 TMPRSS5Q9H3S3 457 aa11.04□□□□□ -0.64
NUP50-219ENST00000497960 RPH3ALQ9UNE2 315 aa11.04□□□□□ -0.64
NUP50-219ENST00000497960 A8MTW9 85 aa11.03□□□□□ -0.64
NUP50-219ENST00000497960 Q6ZTC4 211 aa11.03□□□□□ -0.64
NUP50-219ENST00000497960 CMTM2Q8TAZ6 248 aa11.03□□□□□ -0.64
NUP50-219ENST00000497960 OTORQ9NRC9 128 aa11.03□□□□□ -0.64
NUP50-219ENST00000497960 PGPA6NDG6 321 aa11.02□□□□□ -0.65
NUP50-219ENST00000497960 IGLL5B9A064 214 aa11.02□□□□□ -0.65
NUP50-219ENST00000497960 PRAC2D3DTV9 90 aa11.02□□□□□ -0.65
NUP50-219ENST00000497960 TEX46H3BTG2 121 aa11.02□□□□□ -0.65
NUP50-219ENST00000497960 HBE1P02100 147 aa11.02□□□□□ -0.65
NUP50-219ENST00000497960 EMP1P54849 157 aa11.02□□□□□ -0.65
NUP50-219ENST00000497960 UBE2G2P60604 165 aa11.02□□□□□ -0.65
NUP50-219ENST00000497960 AMTNQ6UX39 209 aa11.02□□□□□ -0.65
NUP50-219ENST00000497960 SUN5Q8TC36 379 aa11.02□□□□□ -0.65
NUP50-219ENST00000497960 MBD3L1Q8WWY6 194 aa11.02□□□□□ -0.65
NUP50-219ENST00000497960 IGF2BP2-AS1Q96M15 143 aa11.02□□□□□ -0.65
NUP50-219ENST00000497960 TMEM208Q9BTX3 173 aa11.02□□□□□ -0.65
NUP50-219ENST00000497960 PPP1R14DQ9NXH3 145 aa11.02□□□□□ -0.65
NUP50-219ENST00000497960 CELA1Q9UNI1 258 aa11.02□□□□□ -0.65
NUP50-219ENST00000497960 LYSTQ99698 3801 aa11.01□□□□□ -0.65
NUP50-219ENST00000497960 IGKV2-40A0A087WW87 121 aaPredicted RBP11.01□□□□□ -0.65
NUP50-219ENST00000497960 IGKV2D-40P01614 121 aaPredicted RBP11.01□□□□□ -0.65
NUP50-219ENST00000497960 SLC25A5P05141 298 aaKnown RBP11.01□□□□□ -0.65
NUP50-219ENST00000497960 SPART-AS1P0CW21 52 aa11.01□□□□□ -0.65
NUP50-219ENST00000497960 PLECQ15149 4684 aaKnown RBP11.01□□□□□ -0.65
NUP50-219ENST00000497960 C12orf74Q32Q52 190 aa11.01□□□□□ -0.65
NUP50-219ENST00000497960 LGALS9CQ6DKI2 356 aa11.01□□□□□ -0.65
NUP50-219ENST00000497960 C1orf158Q8N1D5 194 aa11.01□□□□□ -0.65
NUP50-219ENST00000497960 DNAH1Q9P2D7 4330 aa11.01□□□□□ -0.65
NUP50-219ENST00000497960 TEX48A0A1B0GUV7 120 aa11□□□□□ -0.65
NUP50-219ENST00000497960 GGTLC3B5MD39 225 aa11□□□□□ -0.65
NUP50-219ENST00000497960 INSP01308 110 aa11□□□□□ -0.65
NUP50-219ENST00000497960 SPINK13Q1W4C9 94 aa11□□□□□ -0.65
NUP50-219ENST00000497960 RRN3P1Q2M238 152 aa11□□□□□ -0.65
NUP50-219ENST00000497960 ZNF767PQ75MW2 155 aa11□□□□□ -0.65
NUP50-219ENST00000497960 C5orf17Q8NAS9 161 aa11□□□□□ -0.65
NUP50-219ENST00000497960 RXFP4Q8TDU9 374 aa11□□□□□ -0.65
NUP50-219ENST00000497960 YTHDF2Q9Y5A9 579 aaKnown RBP11□□□□□ -0.65
NUP50-219ENST00000497960 ALMS1Q8TCU4 4167 aa11□□□□□ -0.65
NUP50-219ENST00000497960 DEFB131BA0A096LNP1 70 aa10.99□□□□□ -0.65
NUP50-219ENST00000497960 A0A1W2PRE2 83 aa10.99□□□□□ -0.65
NUP50-219ENST00000497960 NPIPB6E9PJ23 425 aa10.99□□□□□ -0.65
NUP50-219ENST00000497960 M0R2Z0 102 aa10.99□□□□□ -0.65
NUP50-219ENST00000497960 PPT1P50897 306 aa10.99□□□□□ -0.65
NUP50-219ENST00000497960 GNG5P63218 68 aa10.99□□□□□ -0.65
NUP50-219ENST00000497960 ARL2-SNX15V9GYD0 113 aa10.99□□□□□ -0.65
NUP50-219ENST00000497960 LOC102723971A0A1B0GUV8 181 aa10.98□□□□□ -0.65
NUP50-219ENST00000497960 FAM74A7A6NL05 159 aa10.98□□□□□ -0.65
NUP50-219ENST00000497960 DIRC3C9JPN6 131 aa10.98□□□□□ -0.65
NUP50-219ENST00000497960 SUMO1P63165 101 aaKnown RBP10.98□□□□□ -0.65
NUP50-219ENST00000497960 BLOC1S1P78537 153 aa10.98□□□□□ -0.65
NUP50-219ENST00000497960 ERCC8Q13216 396 aa10.98□□□□□ -0.65
NUP50-219ENST00000497960 TMEM78Q5T7P6 136 aa10.98□□□□□ -0.65
NUP50-219ENST00000497960 CST9LP1Q5W188 147 aa10.98□□□□□ -0.65
NUP50-219ENST00000497960 GOLT1AQ6ZVE7 132 aa10.98□□□□□ -0.65
NUP50-219ENST00000497960 APLNQ9ULZ1 77 aa10.98□□□□□ -0.65
NUP50-219ENST00000497960 IGHV4-4A0A075B6R2 117 aa10.97□□□□□ -0.65
NUP50-219ENST00000497960 TRAV1-1A0A0B4J248 108 aa10.97□□□□□ -0.65
NUP50-219ENST00000497960 RBAKDNA6NC62 111 aa10.97□□□□□ -0.65
NUP50-219ENST00000497960 PAGE4O60829 102 aa10.97□□□□□ -0.65
NUP50-219ENST00000497960 IFNA1P01562 189 aa10.97□□□□□ -0.65
NUP50-219ENST00000497960 IFNA7P01567 189 aa10.97□□□□□ -0.65
NUP50-219ENST00000497960 FAM222AQ5U5X8 452 aa10.97□□□□□ -0.65
NUP50-219ENST00000497960 MANBALQ9NQG1 85 aa10.97□□□□□ -0.65
NUP50-219ENST00000497960 GNG13Q9P2W3 67 aa10.97□□□□□ -0.65
NUP50-219ENST00000497960 DKK2Q9UBU2 259 aa10.97□□□□□ -0.65
NUP50-219ENST00000497960 SERTM2A0A1B0GWG4 89 aa10.96□□□□□ -0.65
NUP50-219ENST00000497960 K7EQM0 130 aa10.96□□□□□ -0.65
NUP50-219ENST00000497960 CRXO43186 299 aaPredicted RBP10.96□□□□□ -0.65
NUP50-219ENST00000497960 LEPP41159 167 aa10.96□□□□□ -0.65
NUP50-219ENST00000497960 ATP5G3P48201 142 aa10.96□□□□□ -0.65
NUP50-219ENST00000497960 TEX261Q6UWH6 196 aa10.96□□□□□ -0.65
NUP50-219ENST00000497960 ARL6IP6Q8N6S5 226 aa10.96□□□□□ -0.65
NUP50-219ENST00000497960 Q8TAT8 98 aa10.96□□□□□ -0.65
NUP50-219ENST00000497960 VGLL1Q99990 258 aa10.96□□□□□ -0.65
NUP50-219ENST00000497960 NIPSNAP3BQ9BS92 247 aa10.96□□□□□ -0.65
NUP50-219ENST00000497960 NKX6-2Q9C056 277 aaPredicted RBP10.96□□□□□ -0.65
NUP50-219ENST00000497960 TRAV12-2A0A075B6T6 113 aa10.95□□□□□ -0.66
NUP50-219ENST00000497960 TCRAP04437 139 aa10.95□□□□□ -0.66
NUP50-219ENST00000497960 TSPOP30536 169 aa10.95□□□□□ -0.66
NUP50-219ENST00000497960 CDKN1BP46527 198 aa10.95□□□□□ -0.66
NUP50-219ENST00000497960 C9orf47Q6ZRZ4 202 aa10.95□□□□□ -0.66
NUP50-219ENST00000497960 TMEM256Q8N2U0 113 aa10.95□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms