RNA–Protein interactions for RNA: ENST00000496215.5

COL9A2-211, Transcript of collagen type IX alpha 2 chain, humanhuman

TSL 5

Gene COL9A2, Length 668 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A2-211ENST00000496215 ZNF493Q6ZR52 646 aa14.66□□□□□ -0.06
COL9A2-211ENST00000496215 INO80EQ8NBZ0 244 aaPredicted RBP14.66□□□□□ -0.06
COL9A2-211ENST00000496215 OR2T35Q8NGX2 323 aa14.66□□□□□ -0.06
COL9A2-211ENST00000496215 RNASE8Q8TDE3 154 aaKnown RBP14.66□□□□□ -0.06
COL9A2-211ENST00000496215 LINC00477Q96M19 166 aa14.66□□□□□ -0.06
COL9A2-211ENST00000496215 TRAV12-3A0A0B4J271 114 aa14.65□□□□□ -0.06
COL9A2-211ENST00000496215 SLC25A5P05141 298 aaKnown RBP14.65□□□□□ -0.06
COL9A2-211ENST00000496215 DEFB130BP0DP73 79 aa14.65□□□□□ -0.06
COL9A2-211ENST00000496215 DEFB130AP0DP74 79 aa14.65□□□□□ -0.06
COL9A2-211ENST00000496215 CSN1S1P47710 185 aa14.65□□□□□ -0.06
COL9A2-211ENST00000496215 C9orf47Q6ZRZ4 202 aa14.65□□□□□ -0.06
COL9A2-211ENST00000496215 LYPD1Q8N2G4 141 aa14.65□□□□□ -0.06
COL9A2-211ENST00000496215 FAM210BQ96KR6 192 aa14.65□□□□□ -0.06
COL9A2-211ENST00000496215 AGPAT4-IT1Q9H0P7 198 aa14.65□□□□□ -0.06
COL9A2-211ENST00000496215 Q9H3A6 140 aa14.65□□□□□ -0.06
COL9A2-211ENST00000496215 C7orf71A4D174 169 aa14.64□□□□□ -0.07
COL9A2-211ENST00000496215 EIF3GO75821 320 aaKnown RBP eCLIP14.64□□□□□ -0.07
COL9A2-211ENST00000496215 RANP62826 216 aaKnown RBP14.64□□□□□ -0.07
COL9A2-211ENST00000496215 CCDC28AQ8IWP9 274 aa14.64□□□□□ -0.07
COL9A2-211ENST00000496215 OR10G4Q8NGN3 311 aa14.64□□□□□ -0.07
COL9A2-211ENST00000496215 OR10G9Q8NGN4 311 aa14.64□□□□□ -0.07
COL9A2-211ENST00000496215 OR10G7Q8NGN6 311 aa14.64□□□□□ -0.07
COL9A2-211ENST00000496215 OR2G3Q8NGZ4 309 aa14.64□□□□□ -0.07
COL9A2-211ENST00000496215 PSMG3Q9BT73 122 aaPredicted RBP14.64□□□□□ -0.07
COL9A2-211ENST00000496215 TIMM8BQ9Y5J9 83 aaPredicted RBP14.64□□□□□ -0.07
COL9A2-211ENST00000496215 KLLNB2CW77 178 aa14.63□□□□□ -0.07
COL9A2-211ENST00000496215 PQLC2Q6ZP29 291 aa14.63□□□□□ -0.07
COL9A2-211ENST00000496215 FAM19A4Q96LR4 140 aa14.63□□□□□ -0.07
COL9A2-211ENST00000496215 VGLL1Q99990 258 aa14.63□□□□□ -0.07
COL9A2-211ENST00000496215 PYGO2Q9BRQ0 406 aa14.63□□□□□ -0.07
COL9A2-211ENST00000496215 TNFSF18Q9UNG2 199 aa14.63□□□□□ -0.07
COL9A2-211ENST00000496215 RNF222A6NCQ9 220 aa14.62□□□□□ -0.07
COL9A2-211ENST00000496215 CRISP2P16562 243 aa14.62□□□□□ -0.07
COL9A2-211ENST00000496215 ATP6V0CP27449 155 aa14.62□□□□□ -0.07
COL9A2-211ENST00000496215 CDC34P49427 236 aaPredicted RBP14.62□□□□□ -0.07
COL9A2-211ENST00000496215 BTN1A1Q13410 526 aa14.62□□□□□ -0.07
COL9A2-211ENST00000496215 Q8TAT8 98 aa14.61□□□□□ -0.07
COL9A2-211ENST00000496215 NOP10Q9NPE3 64 aaKnown RBP14.61□□□□□ -0.07
COL9A2-211ENST00000496215 ZNF492Q9P255 531 aa14.61□□□□□ -0.07
COL9A2-211ENST00000496215 RBAKDNA6NC62 111 aa14.6□□□□□ -0.07
COL9A2-211ENST00000496215 SNURFLB1AK76 121 aa14.6□□□□□ -0.07
COL9A2-211ENST00000496215 GPX1P07203 203 aa14.6□□□□□ -0.07
COL9A2-211ENST00000496215 NMBP08949 121 aa14.6□□□□□ -0.07
COL9A2-211ENST00000496215 P0DMU3 169 aa14.6□□□□□ -0.07
COL9A2-211ENST00000496215 FAM231AP0DMU4 169 aa14.6□□□□□ -0.07
COL9A2-211ENST00000496215 FAM231CP0DMU5 169 aa14.6□□□□□ -0.07
COL9A2-211ENST00000496215 ZNF138P52744 262 aa14.6□□□□□ -0.07
COL9A2-211ENST00000496215 FAM74A1Q5RGS3 127 aa14.6□□□□□ -0.07
COL9A2-211ENST00000496215 SH3BGRL3Q9H299 93 aa14.6□□□□□ -0.07
COL9A2-211ENST00000496215 OTORQ9NRC9 128 aa14.6□□□□□ -0.07
COL9A2-211ENST00000496215 BORCS7-ASMTA0A0B4J1R7 106 aa14.59□□□□□ -0.07
COL9A2-211ENST00000496215 HMGB3O15347 200 aaKnown RBP14.59□□□□□ -0.07
COL9A2-211ENST00000496215 MBP02144 154 aa14.59□□□□□ -0.07
COL9A2-211ENST00000496215 ATP5G1P05496 136 aa14.59□□□□□ -0.07
COL9A2-211ENST00000496215 RNASE4P34096 147 aaKnown RBP14.59□□□□□ -0.07
COL9A2-211ENST00000496215 ATP5G3P48201 142 aa14.59□□□□□ -0.07
COL9A2-211ENST00000496215 SERF2P84101 59 aa14.59□□□□□ -0.07
COL9A2-211ENST00000496215 CD300CQ08708 224 aa14.59□□□□□ -0.07
COL9A2-211ENST00000496215 TMEM88Q6PEY1 159 aa14.59□□□□□ -0.07
COL9A2-211ENST00000496215 ZFAND2AQ8N6M9 145 aa14.59□□□□□ -0.07
COL9A2-211ENST00000496215 CMTM2Q8TAZ6 248 aa14.59□□□□□ -0.07
COL9A2-211ENST00000496215 RXFP4Q8TDU9 374 aa14.59□□□□□ -0.07
COL9A2-211ENST00000496215 HYLS1Q96M11 299 aa14.59□□□□□ -0.07
COL9A2-211ENST00000496215 G3V3Q6 166 aa14.58□□□□□ -0.08
COL9A2-211ENST00000496215 ARL14EPLP0DKL9 152 aa14.58□□□□□ -0.08
COL9A2-211ENST00000496215 PRR9Q5T870 116 aa14.58□□□□□ -0.08
COL9A2-211ENST00000496215 RPL7L1Q6DKI1 246 aaKnown RBP14.58□□□□□ -0.08
COL9A2-211ENST00000496215 ZNF680Q8NEM1 530 aa14.58□□□□□ -0.08
COL9A2-211ENST00000496215 GNPNAT1Q96EK6 184 aaPredicted RBP14.58□□□□□ -0.08
COL9A2-211ENST00000496215 RPH3ALQ9UNE2 315 aa14.58□□□□□ -0.08
COL9A2-211ENST00000496215 TRBV7-9A0A0J9YWB2 115 aa14.57□□□□□ -0.08
COL9A2-211ENST00000496215 CBY3A6NI87 242 aa14.57□□□□□ -0.08
COL9A2-211ENST00000496215 DIRC3C9JPN6 131 aa14.57□□□□□ -0.08
COL9A2-211ENST00000496215 LINC00467Q9BRT7 94 aa14.57□□□□□ -0.08
COL9A2-211ENST00000496215 F5H768 121 aa14.56□□□□□ -0.08
COL9A2-211ENST00000496215 ARPC5O15511 151 aa14.56□□□□□ -0.08
COL9A2-211ENST00000496215 ZNF324O75467 553 aaPredicted RBP14.56□□□□□ -0.08
COL9A2-211ENST00000496215 STAG3L2P0CL84 134 aa14.56□□□□□ -0.08
COL9A2-211ENST00000496215 STAG3L3P0CL85 134 aa14.56□□□□□ -0.08
COL9A2-211ENST00000496215 EIF4E3Q8N5X7 224 aaKnown RBP14.56□□□□□ -0.08
COL9A2-211ENST00000496215 PGPA6NDG6 321 aa14.55□□□□□ -0.08
COL9A2-211ENST00000496215 RGS13O14921 159 aa14.55□□□□□ -0.08
COL9A2-211ENST00000496215 UBE2DNLQ8IWF7 75 aa14.55□□□□□ -0.08
COL9A2-211ENST00000496215 C15orf53Q8NAA6 179 aa14.55□□□□□ -0.08
COL9A2-211ENST00000496215 RAB24Q969Q5 203 aa14.55□□□□□ -0.08
COL9A2-211ENST00000496215 ANXA2RQ3ZCQ2 193 aa14.54□□□□□ -0.08
COL9A2-211ENST00000496215 LINC00612Q8N6U2 182 aa14.54□□□□□ -0.08
COL9A2-211ENST00000496215 POM121L12Q8N7R1 296 aa14.54□□□□□ -0.08
COL9A2-211ENST00000496215 ACTR3CQ9C0K3 210 aaPredicted RBP14.54□□□□□ -0.08
COL9A2-211ENST00000496215 LENEPQ9Y5L5 61 aa14.54□□□□□ -0.08
COL9A2-211ENST00000496215 GAGE12BA1L429 117 aa14.53□□□□□ -0.08
COL9A2-211ENST00000496215 GAGE7O76087 117 aa14.53□□□□□ -0.08
COL9A2-211ENST00000496215 GAGE12FP0CL80 117 aa14.53□□□□□ -0.08
COL9A2-211ENST00000496215 GAGE12GP0CL81 117 aa14.53□□□□□ -0.08
COL9A2-211ENST00000496215 GAGE12IP0CL82 117 aa14.53□□□□□ -0.08
COL9A2-211ENST00000496215 GCHFRP30047 84 aa14.53□□□□□ -0.08
COL9A2-211ENST00000496215 DAZ2Q13117 558 aaKnown RBP14.53□□□□□ -0.08
COL9A2-211ENST00000496215 GOLT1AQ6ZVE7 132 aa14.53□□□□□ -0.08
COL9A2-211ENST00000496215 ARL6IP6Q8N6S5 226 aa14.53□□□□□ -0.08
COL9A2-211ENST00000496215 C11orf72Q8NBR9 251 aa14.53□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms