RNA–Protein interactions for RNA: ENST00000495497.1

HDAC4-212, Transcript of histone deacetylase 4, humanhuman

TSL 5

Gene HDAC4, Length 849 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-212ENST00000495497 GOLT1BQ9Y3E0 138 aa14.05□□□□□ -0.16
HDAC4-212ENST00000495497 A0A1B0GV50 99 aa14.04□□□□□ -0.16
HDAC4-212ENST00000495497 PRM2P04554 102 aa14.04□□□□□ -0.16
HDAC4-212ENST00000495497 UBE2G2P60604 165 aa14.04□□□□□ -0.16
HDAC4-212ENST00000495497 FAM74A1Q5RGS3 127 aa14.04□□□□□ -0.16
HDAC4-212ENST00000495497 C9orf47Q6ZRZ4 202 aa14.04□□□□□ -0.16
HDAC4-212ENST00000495497 CMTM2Q8TAZ6 248 aa14.04□□□□□ -0.16
HDAC4-212ENST00000495497 RXFP4Q8TDU9 374 aa14.04□□□□□ -0.16
HDAC4-212ENST00000495497 LINC00477Q96M19 166 aa14.04□□□□□ -0.16
HDAC4-212ENST00000495497 BOLA1Q9Y3E2 137 aa14.04□□□□□ -0.16
HDAC4-212ENST00000495497 SLC25A5P05141 298 aaKnown RBP14.03□□□□□ -0.16
HDAC4-212ENST00000495497 MIFP14174 115 aa14.03□□□□□ -0.16
HDAC4-212ENST00000495497 LEPP41159 167 aa14.03□□□□□ -0.16
HDAC4-212ENST00000495497 SUMO1P63165 101 aaKnown RBP14.03□□□□□ -0.16
HDAC4-212ENST00000495497 TMEM78Q5T7P6 136 aa14.03□□□□□ -0.16
HDAC4-212ENST00000495497 Q8TAT8 98 aa14.03□□□□□ -0.16
HDAC4-212ENST00000495497 SFT2D1Q8WV19 159 aa14.03□□□□□ -0.16
HDAC4-212ENST00000495497 TMEM208Q9BTX3 173 aa14.03□□□□□ -0.16
HDAC4-212ENST00000495497 YTHDF2Q9Y5A9 579 aaKnown RBP14.03□□□□□ -0.16
HDAC4-212ENST00000495497 GGTLC3B5MD39 225 aa14.02□□□□□ -0.17
HDAC4-212ENST00000495497 TSPOP30536 169 aa14.02□□□□□ -0.17
HDAC4-212ENST00000495497 GFI1BQ5VTD9 330 aa14.02□□□□□ -0.17
HDAC4-212ENST00000495497 GOLT1AQ6ZVE7 132 aa14.02□□□□□ -0.17
HDAC4-212ENST00000495497 MUC7Q8TAX7 377 aa14.02□□□□□ -0.17
HDAC4-212ENST00000495497 MBD3L1Q8WWY6 194 aa14.02□□□□□ -0.17
HDAC4-212ENST00000495497 FAM19A4Q96LR4 140 aa14.02□□□□□ -0.17
HDAC4-212ENST00000495497 ODF3Q96PU9 254 aa14.02□□□□□ -0.17
HDAC4-212ENST00000495497 C11orf68Q9H3H3 251 aaKnown RBP14.02□□□□□ -0.17
HDAC4-212ENST00000495497 STARD9Q9P2P6 4700 aa14.02□□□□□ -0.17
HDAC4-212ENST00000495497 DPPA3Q6W0C5 159 aa14.01□□□□□ -0.17
HDAC4-212ENST00000495497 IL17DQ8TAD2 202 aa14.01□□□□□ -0.17
HDAC4-212ENST00000495497 LINC01587Q99440 93 aa14.01□□□□□ -0.17
HDAC4-212ENST00000495497 NEU1Q99519 415 aa14.01□□□□□ -0.17
HDAC4-212ENST00000495497 ZNF492Q9P255 531 aa14.01□□□□□ -0.17
HDAC4-212ENST00000495497 A0A1W2PRE2 83 aa14□□□□□ -0.17
HDAC4-212ENST00000495497 RBAKDNA6NC62 111 aa14□□□□□ -0.17
HDAC4-212ENST00000495497 ZNF705GA8MUZ8 300 aaPredicted RBP14□□□□□ -0.17
HDAC4-212ENST00000495497 H2AFB1P0C5Y9 115 aa14□□□□□ -0.17
HDAC4-212ENST00000495497 ZNF138P52744 262 aa14□□□□□ -0.17
HDAC4-212ENST00000495497 ZFAND6Q6FIF0 208 aa14□□□□□ -0.17
HDAC4-212ENST00000495497 EIF5AL1Q6IS14 154 aaKnown RBP14□□□□□ -0.17
HDAC4-212ENST00000495497 SGK494Q96LW2 274 aa14□□□□□ -0.17
HDAC4-212ENST00000495497 TRAV8-1A0A0A6YYK1 113 aa13.99□□□□□ -0.17
HDAC4-212ENST00000495497 TRAV12-3A0A0B4J271 114 aa13.99□□□□□ -0.17
HDAC4-212ENST00000495497 FAM74A7A6NL05 159 aa13.99□□□□□ -0.17
HDAC4-212ENST00000495497 SULT1A2P50226 295 aa13.99□□□□□ -0.17
HDAC4-212ENST00000495497 BTN1A1Q13410 526 aa13.99□□□□□ -0.17
HDAC4-212ENST00000495497 PRR9Q5T870 116 aa13.99□□□□□ -0.17
HDAC4-212ENST00000495497 C5orf17Q8NAS9 161 aa13.99□□□□□ -0.17
HDAC4-212ENST00000495497 SMIM9A6NGZ8 99 aa13.98□□□□□ -0.17
HDAC4-212ENST00000495497 HBE1P02100 147 aa13.98□□□□□ -0.17
HDAC4-212ENST00000495497 TCRAP04437 139 aa13.98□□□□□ -0.17
HDAC4-212ENST00000495497 HTN1P15515 57 aa13.98□□□□□ -0.17
HDAC4-212ENST00000495497 RNASE4P34096 147 aaKnown RBP13.98□□□□□ -0.17
HDAC4-212ENST00000495497 EMP1P54849 157 aa13.98□□□□□ -0.17
HDAC4-212ENST00000495497 EPDR1Q9UM22 224 aa13.98□□□□□ -0.17
HDAC4-212ENST00000495497 KLLNB2CW77 178 aa13.97□□□□□ -0.17
HDAC4-212ENST00000495497 GPX1P07203 203 aa13.97□□□□□ -0.17
HDAC4-212ENST00000495497 CRISP2P16562 243 aa13.97□□□□□ -0.17
HDAC4-212ENST00000495497 AZU1P20160 251 aa13.97□□□□□ -0.17
HDAC4-212ENST00000495497 NANOS2P60321 138 aaKnown RBP13.97□□□□□ -0.17
HDAC4-212ENST00000495497 RRN3P1Q2M238 152 aa13.97□□□□□ -0.17
HDAC4-212ENST00000495497 Q6ZQT7 251 aa13.97□□□□□ -0.17
HDAC4-212ENST00000495497 ZFAND2AQ8N6M9 145 aa13.97□□□□□ -0.17
HDAC4-212ENST00000495497 ARL6IP6Q8N6S5 226 aa13.97□□□□□ -0.17
HDAC4-212ENST00000495497 CELA1Q9UNI1 258 aa13.97□□□□□ -0.17
HDAC4-212ENST00000495497 CSMD3Q7Z407 3707 aa13.97□□□□□ -0.17
HDAC4-212ENST00000495497 LOC102723971A0A1B0GUV8 181 aa13.96□□□□□ -0.17
HDAC4-212ENST00000495497 C7orf71A4D174 169 aa13.96□□□□□ -0.17
HDAC4-212ENST00000495497 IFNA7P01567 189 aa13.96□□□□□ -0.17
HDAC4-212ENST00000495497 RAB5CP51148 216 aa13.96□□□□□ -0.17
HDAC4-212ENST00000495497 CCL20P78556 96 aa13.96□□□□□ -0.17
HDAC4-212ENST00000495497 PMS2P11Q13670 270 aa13.96□□□□□ -0.17
HDAC4-212ENST00000495497 ALKAL2Q6UX46 152 aa13.96□□□□□ -0.17
HDAC4-212ENST00000495497 DYNC2H1Q8NCM8 4307 aaKnown RBP13.96□□□□□ -0.18
HDAC4-212ENST00000495497 C3orf84H3BNL1 204 aa13.95□□□□□ -0.18
HDAC4-212ENST00000495497 PAGE4O60829 102 aa13.95□□□□□ -0.18
HDAC4-212ENST00000495497 ATP5G3P48201 142 aa13.95□□□□□ -0.18
HDAC4-212ENST00000495497 CST9LP1Q5W188 147 aa13.95□□□□□ -0.18
HDAC4-212ENST00000495497 TMEM256Q8N2U0 113 aa13.95□□□□□ -0.18
HDAC4-212ENST00000495497 C11orf45Q8TAV5 145 aa13.95□□□□□ -0.18
HDAC4-212ENST00000495497 TVP23CQ96ET8 276 aa13.95□□□□□ -0.18
HDAC4-212ENST00000495497 LINC00479Q96M42 142 aa13.95□□□□□ -0.18
HDAC4-212ENST00000495497 H7BYZ3 331 aa13.94□□□□□ -0.18
HDAC4-212ENST00000495497 ZNF324O75467 553 aaPredicted RBP13.94□□□□□ -0.18
HDAC4-212ENST00000495497 TAS2R60P59551 318 aa13.94□□□□□ -0.18
HDAC4-212ENST00000495497 C20orf144Q9BQM9 153 aa13.94□□□□□ -0.18
HDAC4-212ENST00000495497 NIPSNAP3BQ9BS92 247 aa13.94□□□□□ -0.18
HDAC4-212ENST00000495497 TRAV34A0A0B4J273 112 aa13.93□□□□□ -0.18
HDAC4-212ENST00000495497 IGLV2-11P01706 119 aa13.93□□□□□ -0.18
HDAC4-212ENST00000495497 NMBP08949 121 aa13.93□□□□□ -0.18
HDAC4-212ENST00000495497 CASC10Q5T4H9 136 aa13.93□□□□□ -0.18
HDAC4-212ENST00000495497 ZNF767PQ75MW2 155 aa13.93□□□□□ -0.18
HDAC4-212ENST00000495497 CCDC28AQ8IWP9 274 aa13.93□□□□□ -0.18
HDAC4-212ENST00000495497 CYB561D1Q8N8Q1 229 aa13.93□□□□□ -0.18
HDAC4-212ENST00000495497 ATG101Q9BSB4 218 aa13.93□□□□□ -0.18
HDAC4-212ENST00000495497 TRBV7-9A0A0J9YWB2 115 aa13.92□□□□□ -0.18
HDAC4-212ENST00000495497 SERTM2A0A1B0GWG4 89 aa13.92□□□□□ -0.18
HDAC4-212ENST00000495497 CXorf65A6NEN9 183 aa13.92□□□□□ -0.18
HDAC4-212ENST00000495497 PEX7O00628 323 aa13.92□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 87.4 ms