RNA–Protein interactions for RNA: ENST00000494776.1

LIME1-209, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

TSL 5

Gene LIME1, Length 391 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-209ENST00000494776 C2CD4CQ8TF44 421 aa11.43□□□□□ -0.58
LIME1-209ENST00000494776 ARPC5LQ9BPX5 153 aa11.43□□□□□ -0.58
LIME1-209ENST00000494776 OTORQ9NRC9 128 aa11.43□□□□□ -0.58
LIME1-209ENST00000494776 TRAV12-3A0A0B4J271 114 aa11.42□□□□□ -0.58
LIME1-209ENST00000494776 PGPA6NDG6 321 aa11.42□□□□□ -0.58
LIME1-209ENST00000494776 HMSDA8MTL9 139 aa11.42□□□□□ -0.58
LIME1-209ENST00000494776 H7BYZ3 331 aa11.42□□□□□ -0.58
LIME1-209ENST00000494776 STAG3L2P0CL84 134 aa11.42□□□□□ -0.58
LIME1-209ENST00000494776 STAG3L3P0CL85 134 aa11.42□□□□□ -0.58
LIME1-209ENST00000494776 ZNF345Q14585 488 aa11.42□□□□□ -0.58
LIME1-209ENST00000494776 AKR1C8PQ5T2L2 129 aa11.42□□□□□ -0.58
LIME1-209ENST00000494776 VGLL1Q99990 258 aa11.42□□□□□ -0.58
LIME1-209ENST00000494776 NIPSNAP3BQ9BS92 247 aa11.42□□□□□ -0.58
LIME1-209ENST00000494776 DKK2Q9UBU2 259 aa11.42□□□□□ -0.58
LIME1-209ENST00000494776 RPH3ALQ9UNE2 315 aa11.42□□□□□ -0.58
LIME1-209ENST00000494776 CSMD3Q7Z407 3707 aa11.42□□□□□ -0.58
LIME1-209ENST00000494776 RYR2Q92736 4967 aa11.42□□□□□ -0.58
LIME1-209ENST00000494776 STARD9Q9P2P6 4700 aa11.42□□□□□ -0.58
LIME1-209ENST00000494776 A0A0D9SG52 128 aa11.41□□□□□ -0.58
LIME1-209ENST00000494776 IGLL5B9A064 214 aa11.41□□□□□ -0.58
LIME1-209ENST00000494776 SLC25A5P05141 298 aaKnown RBP11.41□□□□□ -0.58
LIME1-209ENST00000494776 GPX1P07203 203 aa11.41□□□□□ -0.58
LIME1-209ENST00000494776 CCDC28AQ8IWP9 274 aa11.41□□□□□ -0.58
LIME1-209ENST00000494776 IQCF2Q8IXL9 164 aa11.41□□□□□ -0.58
LIME1-209ENST00000494776 KCNRGQ8N5I3 272 aa11.41□□□□□ -0.58
LIME1-209ENST00000494776 OR11H4Q8NGC9 324 aa11.41□□□□□ -0.58
LIME1-209ENST00000494776 CYTL1Q9NRR1 136 aa11.41□□□□□ -0.58
LIME1-209ENST00000494776 DEFB131BA0A096LNP1 70 aa11.4□□□□□ -0.58
LIME1-209ENST00000494776 KANTRA0A1W2PQU2 76 aa11.4□□□□□ -0.58
LIME1-209ENST00000494776 C7orf71A4D174 169 aa11.4□□□□□ -0.58
LIME1-209ENST00000494776 CXorf1O96002 111 aa11.4□□□□□ -0.58
LIME1-209ENST00000494776 AZU1P20160 251 aa11.4□□□□□ -0.58
LIME1-209ENST00000494776 GCHFRP30047 84 aa11.4□□□□□ -0.58
LIME1-209ENST00000494776 RNASE4P34096 147 aaKnown RBP11.4□□□□□ -0.58
LIME1-209ENST00000494776 ZNF138P52744 262 aa11.4□□□□□ -0.58
LIME1-209ENST00000494776 C16orf74Q96GX8 76 aa11.4□□□□□ -0.58
LIME1-209ENST00000494776 ZNF492Q9P255 531 aa11.4□□□□□ -0.58
LIME1-209ENST00000494776 RBAKDNA6NC62 111 aa11.39□□□□□ -0.59
LIME1-209ENST00000494776 DIRC3C9JPN6 131 aa11.39□□□□□ -0.59
LIME1-209ENST00000494776 DAD1P61803 113 aa11.39□□□□□ -0.59
LIME1-209ENST00000494776 TMEM167BQ9NRX6 74 aa11.39□□□□□ -0.59
LIME1-209ENST00000494776 TENM2Q9NT68 2774 aa11.39□□□□□ -0.59
LIME1-209ENST00000494776 PLA2G2EQ9NZK7 142 aa11.39□□□□□ -0.59
LIME1-209ENST00000494776 CTXND1A0A1B0GTU2 59 aa11.38□□□□□ -0.59
LIME1-209ENST00000494776 PFDN1O60925 122 aa11.38□□□□□ -0.59
LIME1-209ENST00000494776 LY6G6CO95867 125 aa11.38□□□□□ -0.59
LIME1-209ENST00000494776 Q6ZNX1 250 aa11.38□□□□□ -0.59
LIME1-209ENST00000494776 ZNF493Q6ZR52 646 aa11.38□□□□□ -0.59
LIME1-209ENST00000494776 Q8TAT8 98 aa11.38□□□□□ -0.59
LIME1-209ENST00000494776 FAM19A4Q96LR4 140 aa11.38□□□□□ -0.59
LIME1-209ENST00000494776 ZNF471Q9BX82 626 aaPredicted RBP11.38□□□□□ -0.59
LIME1-209ENST00000494776 LYRM9A8MSI8 78 aa11.37□□□□□ -0.59
LIME1-209ENST00000494776 KLLNB2CW77 178 aa11.37□□□□□ -0.59
LIME1-209ENST00000494776 BCL2L11O43521 198 aa11.37□□□□□ -0.59
LIME1-209ENST00000494776 NMBP08949 121 aa11.37□□□□□ -0.59
LIME1-209ENST00000494776 HTN3P15516 51 aa11.37□□□□□ -0.59
LIME1-209ENST00000494776 CRISP2P16562 243 aa11.37□□□□□ -0.59
LIME1-209ENST00000494776 CD300CQ08708 224 aa11.37□□□□□ -0.59
LIME1-209ENST00000494776 BTN1A1Q13410 526 aa11.37□□□□□ -0.59
LIME1-209ENST00000494776 SSX7Q7RTT5 188 aa11.37□□□□□ -0.59
LIME1-209ENST00000494776 TMEM263Q8WUH6 116 aaKnown RBP11.37□□□□□ -0.59
LIME1-209ENST00000494776 PYGO2Q9BRQ0 406 aa11.37□□□□□ -0.59
LIME1-209ENST00000494776 TIMM8BQ9Y5J9 83 aaPredicted RBP11.37□□□□□ -0.59
LIME1-209ENST00000494776 SACSQ9NZJ4 4579 aa11.37□□□□□ -0.59
LIME1-209ENST00000494776 LYSTQ99698 3801 aa11.36□□□□□ -0.59
LIME1-209ENST00000494776 hCG_2014768A0A024R1R8 64 aa11.36□□□□□ -0.59
LIME1-209ENST00000494776 DEFB130BP0DP73 79 aa11.36□□□□□ -0.59
LIME1-209ENST00000494776 DEFB130AP0DP74 79 aa11.36□□□□□ -0.59
LIME1-209ENST00000494776 TCTAP57738 103 aa11.36□□□□□ -0.59
LIME1-209ENST00000494776 EIF5AP63241 154 aaKnown RBP11.36□□□□□ -0.59
LIME1-209ENST00000494776 GOLT1AQ6ZVE7 132 aa11.36□□□□□ -0.59
LIME1-209ENST00000494776 ARL6IP6Q8N6S5 226 aa11.36□□□□□ -0.59
LIME1-209ENST00000494776 ST6GAL2Q96JF0 529 aa11.36□□□□□ -0.59
LIME1-209ENST00000494776 IGHV4-4A0A075B6R2 117 aa11.35□□□□□ -0.59
LIME1-209ENST00000494776 TRBV7-9A0A0J9YWB2 115 aa11.35□□□□□ -0.59
LIME1-209ENST00000494776 SNURFLB1AK76 121 aa11.35□□□□□ -0.59
LIME1-209ENST00000494776 GNG5P63218 68 aa11.35□□□□□ -0.59
LIME1-209ENST00000494776 ZNF726P1Q15940 193 aa11.35□□□□□ -0.59
LIME1-209ENST00000494776 TMUB2Q71RG4 321 aa11.35□□□□□ -0.59
LIME1-209ENST00000494776 ZFAND2AQ8N6M9 145 aa11.35□□□□□ -0.59
LIME1-209ENST00000494776 SUN5Q8TC36 379 aa11.35□□□□□ -0.59
LIME1-209ENST00000494776 RNASE8Q8TDE3 154 aaKnown RBP11.35□□□□□ -0.59
LIME1-209ENST00000494776 LINC00476Q8WZB0 136 aa11.35□□□□□ -0.59
LIME1-209ENST00000494776 NOP10Q9NPE3 64 aaKnown RBP11.35□□□□□ -0.59
LIME1-209ENST00000494776 PLAC8L1A1L4L8 177 aa11.34□□□□□ -0.59
LIME1-209ENST00000494776 CBY3A6NI87 242 aa11.34□□□□□ -0.59
LIME1-209ENST00000494776 K7EQM0 130 aa11.34□□□□□ -0.59
LIME1-209ENST00000494776 RGS13O14921 159 aa11.34□□□□□ -0.59
LIME1-209ENST00000494776 ZNF324O75467 553 aaPredicted RBP11.34□□□□□ -0.59
LIME1-209ENST00000494776 FGF8P55075 233 aaPredicted RBP11.34□□□□□ -0.59
LIME1-209ENST00000494776 SUMO1P63165 101 aaKnown RBP11.34□□□□□ -0.59
LIME1-209ENST00000494776 TCTE3Q8IZS6 198 aa11.34□□□□□ -0.59
LIME1-209ENST00000494776 C5orf17Q8NAS9 161 aa11.34□□□□□ -0.59
LIME1-209ENST00000494776 LENEPQ9Y5L5 61 aa11.34□□□□□ -0.59
LIME1-209ENST00000494776 SERTM2A0A1B0GWG4 89 aa11.33□□□□□ -0.6
LIME1-209ENST00000494776 MAP1LC3B2A6NCE7 125 aa11.33□□□□□ -0.6
LIME1-209ENST00000494776 SEC11BP0C7V7 166 aa11.33□□□□□ -0.6
LIME1-209ENST00000494776 PRR9Q5T870 116 aa11.33□□□□□ -0.6
LIME1-209ENST00000494776 EIF4E3Q8N5X7 224 aaKnown RBP11.33□□□□□ -0.6
LIME1-209ENST00000494776 STOML3Q8TAV4 291 aa11.33□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 64 ms