RNA–Protein interactions for RNA: ENST00000494090.6

COL27A1-207, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL27A1, Length 5,329 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-207ENST00000494090 ZNF134P52741 427 aa15.3■□□□□ 0.04
COL27A1-207ENST00000494090 SPAG8Q99932 426 aaPredicted RBP15.3■□□□□ 0.04
COL27A1-207ENST00000494090 WT1-ASQ06250 92 aa15.3■□□□□ 0.04
COL27A1-207ENST00000494090 ELANEP08246 267 aa15.29■□□□□ 0.04
COL27A1-207ENST00000494090 ESDP10768 282 aa15.29■□□□□ 0.04
COL27A1-207ENST00000494090 STPG4Q8N801 248 aa15.29■□□□□ 0.04
COL27A1-207ENST00000494090 HELZP42694 1942 aaKnown RBP15.29■□□□□ 0.04
COL27A1-207ENST00000494090 DKK1O94907 266 aa15.29■□□□□ 0.04
COL27A1-207ENST00000494090 F5H768 121 aa15.29■□□□□ 0.04
COL27A1-207ENST00000494090 I3L3M4 83 aa15.29■□□□□ 0.04
COL27A1-207ENST00000494090 ZNF561-AS1K7EIQ3 104 aa15.29■□□□□ 0.04
COL27A1-207ENST00000494090 LURAP1LQ8IV03 231 aa15.29■□□□□ 0.04
COL27A1-207ENST00000494090 SPXQ9BT56 116 aa15.29■□□□□ 0.04
COL27A1-207ENST00000494090 VWC2LB2RUY7 222 aa15.28■□□□□ 0.04
COL27A1-207ENST00000494090 H3BUA1 57 aa15.28■□□□□ 0.04
COL27A1-207ENST00000494090 GAGE2BQ13066 116 aa15.28■□□□□ 0.04
COL27A1-207ENST00000494090 GAGE2EQ4V326 116 aa15.28■□□□□ 0.04
COL27A1-207ENST00000494090 LYPD6BQ8NI32 183 aa15.28■□□□□ 0.04
COL27A1-207ENST00000494090 GAGE2DQ9UEU5 116 aa15.28■□□□□ 0.04
COL27A1-207ENST00000494090 ANAPC1Q9H1A4 1944 aa15.28■□□□□ 0.04
COL27A1-207ENST00000494090 H3BRN7 92 aa15.28■□□□□ 0.04
COL27A1-207ENST00000494090 Q8N8P6 123 aa15.28■□□□□ 0.04
COL27A1-207ENST00000494090 ZNF114Q8NC26 417 aa15.28■□□□□ 0.04
COL27A1-207ENST00000494090 SPINK13Q1W4C9 94 aa15.28■□□□□ 0.04
COL27A1-207ENST00000494090 RMI2Q96E14 147 aa15.28■□□□□ 0.04
COL27A1-207ENST00000494090 MYO7BQ6PIF6 2116 aa15.27■□□□□ 0.04
COL27A1-207ENST00000494090 NBL1P41271 181 aa15.27■□□□□ 0.04
COL27A1-207ENST00000494090 THAP8Q8NA92 274 aa15.27■□□□□ 0.04
COL27A1-207ENST00000494090 KAAG1Q9UBP8 84 aa15.27■□□□□ 0.04
COL27A1-207ENST00000494090 SRSF2Q01130 221 aaKnown RBP15.27■□□□□ 0.04
COL27A1-207ENST00000494090 POU2AF1Q16633 256 aa15.27■□□□□ 0.04
COL27A1-207ENST00000494090 CDKN1BP46527 198 aa15.27■□□□□ 0.03
COL27A1-207ENST00000494090 SLAQ13239 276 aa15.27■□□□□ 0.03
COL27A1-207ENST00000494090 TCTEX1D4Q5JR98 221 aa15.27■□□□□ 0.03
COL27A1-207ENST00000494090 Q6ZWC4 215 aa15.27■□□□□ 0.03
COL27A1-207ENST00000494090 IGHV2-70P01814 119 aa15.27■□□□□ 0.03
COL27A1-207ENST00000494090 SSBP2P81877 361 aaPredicted RBP15.27■□□□□ 0.03
COL27A1-207ENST00000494090 C8orf86Q6ZUL3 223 aa15.27■□□□□ 0.03
COL27A1-207ENST00000494090 GAGE12BA1L429 117 aa15.26■□□□□ 0.03
COL27A1-207ENST00000494090 G3V318 75 aa15.26■□□□□ 0.03
COL27A1-207ENST00000494090 GAGE12JA6NER3 117 aa15.26■□□□□ 0.03
COL27A1-207ENST00000494090 GAGE1Q13065 139 aa15.26■□□□□ 0.03
COL27A1-207ENST00000494090 GAGE4Q13068 117 aa15.26■□□□□ 0.03
COL27A1-207ENST00000494090 GAGE5Q13069 117 aa15.26■□□□□ 0.03
COL27A1-207ENST00000494090 COL6A6A6NMZ7 2263 aa15.26■□□□□ 0.03
COL27A1-207ENST00000494090 POLEQ07864 2286 aa15.26■□□□□ 0.03
COL27A1-207ENST00000494090 AZU1P20160 251 aa15.26■□□□□ 0.03
COL27A1-207ENST00000494090 ABCA4P78363 2273 aa15.25■□□□□ 0.03
COL27A1-207ENST00000494090 PRR25Q96S07 402 aa15.25■□□□□ 0.03
COL27A1-207ENST00000494090 SNHG12Q9BXW3 62 aa15.25■□□□□ 0.03
COL27A1-207ENST00000494090 TP53TG1Q9Y2A0 90 aa15.25■□□□□ 0.03
COL27A1-207ENST00000494090 C1orf122Q6ZSJ8 110 aa15.25■□□□□ 0.03
COL27A1-207ENST00000494090 IGLC2P0DOY2 106 aa15.25■□□□□ 0.03
COL27A1-207ENST00000494090 IGLC3P0DOY3 106 aa15.25■□□□□ 0.03
COL27A1-207ENST00000494090 C2orf66Q6UXQ4 117 aa15.25■□□□□ 0.03
COL27A1-207ENST00000494090 CACNA1BQ00975 2339 aa15.25■□□□□ 0.03
COL27A1-207ENST00000494090 PRR20EP86478 221 aa15.24■□□□□ 0.03
COL27A1-207ENST00000494090 PRR20CP86479 221 aa15.24■□□□□ 0.03
COL27A1-207ENST00000494090 PRR20DP86480 221 aa15.24■□□□□ 0.03
COL27A1-207ENST00000494090 PRR20BP86481 221 aa15.24■□□□□ 0.03
COL27A1-207ENST00000494090 PRR20AP86496 221 aa15.24■□□□□ 0.03
COL27A1-207ENST00000494090 MMP23AO75900 390 aa15.24■□□□□ 0.03
COL27A1-207ENST00000494090 MRPL51Q4U2R6 128 aaKnown RBP15.24■□□□□ 0.03
COL27A1-207ENST00000494090 ZFAND6Q6FIF0 208 aa15.24■□□□□ 0.03
COL27A1-207ENST00000494090 TMEM243Q9BU79 118 aa15.24■□□□□ 0.03
COL27A1-207ENST00000494090 FXYD5Q96DB9 178 aa15.24■□□□□ 0.03
COL27A1-207ENST00000494090 TPSG1Q9NRR2 321 aa15.24■□□□□ 0.03
COL27A1-207ENST00000494090 PMVKQ15126 192 aa15.24■□□□□ 0.03
COL27A1-207ENST00000494090 HIST1H4AP62805 103 aaKnown RBP15.23■□□□□ 0.03
COL27A1-207ENST00000494090 PIP4P1Q86T03 277 aa15.23■□□□□ 0.03
COL27A1-207ENST00000494090 C8orf31Q8N9H6 132 aa15.23■□□□□ 0.03
COL27A1-207ENST00000494090 IGHV1-24A0A0C4DH33 117 aa15.23■□□□□ 0.03
COL27A1-207ENST00000494090 TANC1Q9C0D5 1861 aa15.23■□□□□ 0.03
COL27A1-207ENST00000494090 KNCNA6PVL3 124 aa15.23■□□□□ 0.03
COL27A1-207ENST00000494090 FAM215AQ9Y5M1 114 aa15.22■□□□□ 0.03
COL27A1-207ENST00000494090 ABCA1O95477 2261 aa15.22■□□□□ 0.03
COL27A1-207ENST00000494090 IGLC1P0CG04 106 aa15.22■□□□□ 0.03
COL27A1-207ENST00000494090 K7EM74 188 aa15.22■□□□□ 0.03
COL27A1-207ENST00000494090 ROS1P08922 2347 aa15.21■□□□□ 0.03
COL27A1-207ENST00000494090 VWC2Q2TAL6 325 aa15.21■□□□□ 0.03
COL27A1-207ENST00000494090 RNF138Q8WVD3 245 aa15.21■□□□□ 0.03
COL27A1-207ENST00000494090 PLXND1Q9Y4D7 1925 aa15.21■□□□□ 0.03
COL27A1-207ENST00000494090 MAPK1IP1LQ8NDC0 245 aa15.21■□□□□ 0.03
COL27A1-207ENST00000494090 TRAV8-3A0A0A6YYJ7 113 aa15.21■□□□□ 0.02
COL27A1-207ENST00000494090 IGHV7-4-1A0A0J9YVY3 117 aa15.21■□□□□ 0.02
COL27A1-207ENST00000494090 KLK9Q9UKQ9 250 aa15.21■□□□□ 0.02
COL27A1-207ENST00000494090 LGALS9BQ3B8N2 356 aa15.2■□□□□ 0.02
COL27A1-207ENST00000494090 LGALS9CQ6DKI2 356 aa15.2■□□□□ 0.02
COL27A1-207ENST00000494090 FRMPD3Q5JV73 1810 aa15.2■□□□□ 0.02
COL27A1-207ENST00000494090 SDHAF1A6NFY7 115 aa15.2■□□□□ 0.02
COL27A1-207ENST00000494090 ATP6V0BQ99437 205 aa15.2■□□□□ 0.02
COL27A1-207ENST00000494090 ADAMTSL5Q6ZMM2 481 aa15.2■□□□□ 0.02
COL27A1-207ENST00000494090 NKAPP1Q8N9T2 125 aa15.2■□□□□ 0.02
COL27A1-207ENST00000494090 H3BMM0 161 aa15.19■□□□□ 0.02
COL27A1-207ENST00000494090 DOCK8Q8NF50 2099 aa15.19■□□□□ 0.02
COL27A1-207ENST00000494090 DIAPH2-AS1Q14236 149 aa15.19■□□□□ 0.02
COL27A1-207ENST00000494090 Q6ZSR3 168 aa15.19■□□□□ 0.02
COL27A1-207ENST00000494090 ZC2HC1AQ96GY0 325 aa15.19■□□□□ 0.02
COL27A1-207ENST00000494090 DIDO1Q9BTC0 2240 aaKnown RBP15.19■□□□□ 0.02
COL27A1-207ENST00000494090 PRSS57Q6UWY2 283 aa15.19■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 61.8 ms