RNA–Protein interactions for RNA: ENST00000493695.1

SMC4-223, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 457 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-223ENST00000493695 CRYBA4P53673 196 aa0.2□□□□□ -2.38
SMC4-223ENST00000493695 RPL37AP61513 92 aaKnown RBP0.2□□□□□ -2.38
SMC4-223ENST00000493695 BORCS8Q96FH0 119 aa0.2□□□□□ -2.38
SMC4-223ENST00000493695 EFCAB11Q9BUY7 163 aa0.2□□□□□ -2.38
SMC4-223ENST00000493695 BIN3Q9NQY0 253 aa0.2□□□□□ -2.38
SMC4-223ENST00000493695 BOKQ9UMX3 212 aaPredicted RBP0.2□□□□□ -2.38
SMC4-223ENST00000493695 TPRKBQ9Y3C4 175 aa0.2□□□□□ -2.38
SMC4-223ENST00000493695 KIAA1549LQ6ZVL6 1849 aa0.2□□□□□ -2.38
SMC4-223ENST00000493695 VMA21Q3ZAQ7 101 aa0.19□□□□□ -2.38
SMC4-223ENST00000493695 C6orf52Q5T4I8 152 aa0.19□□□□□ -2.38
SMC4-223ENST00000493695 C10orf99Q6UWK7 81 aa0.19□□□□□ -2.38
SMC4-223ENST00000493695 STX19Q8N4C7 294 aa0.19□□□□□ -2.38
SMC4-223ENST00000493695 NEK7Q8TDX7 302 aa0.19□□□□□ -2.38
SMC4-223ENST00000493695 NAT8BQ9UHF3 227 aa0.19□□□□□ -2.38
SMC4-223ENST00000493695 TCOF1Q13428 1488 aaKnown RBP0.18□□□□□ -2.38
SMC4-223ENST00000493695 PPP5D1E7EU14 171 aa0.18□□□□□ -2.38
SMC4-223ENST00000493695 MT-ND6P03923 174 aa0.18□□□□□ -2.38
SMC4-223ENST00000493695 TMEM78Q5T7P6 136 aa0.18□□□□□ -2.38
SMC4-223ENST00000493695 SYNE1Q8NF91 8797 aaKnown RBP0.18□□□□□ -2.38
SMC4-223ENST00000493695 SERPINB1P30740 379 aa0.17□□□□□ -2.38
SMC4-223ENST00000493695 FXYD6P3P58550 94 aa0.17□□□□□ -2.38
SMC4-223ENST00000493695 C3orf33Q6P1S2 294 aa0.17□□□□□ -2.38
SMC4-223ENST00000493695 IZUMO2Q6UXV1 221 aa0.17□□□□□ -2.38
SMC4-223ENST00000493695 DEFB132Q7Z7B7 95 aa0.17□□□□□ -2.38
SMC4-223ENST00000493695 FAM24BQ8N5W8 94 aa0.17□□□□□ -2.38
SMC4-223ENST00000493695 OR4B1Q8NGF8 309 aa0.17□□□□□ -2.38
SMC4-223ENST00000493695 ISOC1Q96CN7 298 aa0.17□□□□□ -2.38
SMC4-223ENST00000493695 E5RI56 91 aa0.16□□□□□ -2.38
SMC4-223ENST00000493695 CASC2Q6XLA1 102 aa0.16□□□□□ -2.38
SMC4-223ENST00000493695 Q86TA4 180 aa0.16□□□□□ -2.38
SMC4-223ENST00000493695 LPAR5Q9H1C0 372 aa0.16□□□□□ -2.38
SMC4-223ENST00000493695 MED11Q9P086 117 aa0.16□□□□□ -2.38
SMC4-223ENST00000493695 MAP1LC3B2A6NCE7 125 aa0.15□□□□□ -2.39
SMC4-223ENST00000493695 TRACP01848 142 aa0.15□□□□□ -2.39
SMC4-223ENST00000493695 BCL2P10415 239 aa0.15□□□□□ -2.39
SMC4-223ENST00000493695 DCUN1D2Q6PH85 259 aa0.15□□□□□ -2.39
SMC4-223ENST00000493695 GRPEL2Q8TAA5 225 aa0.15□□□□□ -2.39
SMC4-223ENST00000493695 GID8Q9NWU2 228 aa0.15□□□□□ -2.39
SMC4-223ENST00000493695 NUP210Q8TEM1 1887 aaPredicted RBP0.15□□□□□ -2.39
SMC4-223ENST00000493695 A0A1W2PRE2 83 aa0.14□□□□□ -2.39
SMC4-223ENST00000493695 GABARAPH6UMI1 98 aa0.14□□□□□ -2.39
SMC4-223ENST00000493695 SAA1P0DJI8 122 aaPredicted RBP0.14□□□□□ -2.39
SMC4-223ENST00000493695 FABP2P12104 132 aa0.14□□□□□ -2.39
SMC4-223ENST00000493695 GNG10P50151 68 aa0.14□□□□□ -2.39
SMC4-223ENST00000493695 CAV3P56539 151 aa0.14□□□□□ -2.39
SMC4-223ENST00000493695 NEDD8Q15843 81 aa0.14□□□□□ -2.39
SMC4-223ENST00000493695 XAF1Q6GPH4 301 aa0.14□□□□□ -2.39
SMC4-223ENST00000493695 CROCCP2Q86T23 111 aa0.14□□□□□ -2.39
SMC4-223ENST00000493695 OR5AK2Q8NH90 309 aa0.14□□□□□ -2.39
SMC4-223ENST00000493695 DYDC1Q8WWB3 177 aa0.14□□□□□ -2.39
SMC4-223ENST00000493695 CLEC2BQ92478 149 aa0.14□□□□□ -2.39
SMC4-223ENST00000493695 TNCP24821 2201 aa0.14□□□□□ -2.39
SMC4-223ENST00000493695 CACNA1EQ15878 2313 aa0.14□□□□□ -2.39
SMC4-223ENST00000493695 FAM135BQ49AJ0 1406 aa0.13□□□□□ -2.39
SMC4-223ENST00000493695 DLC1Q96QB1 1528 aa0.13□□□□□ -2.39
SMC4-223ENST00000493695 TRBV7-6A0A0J9YX20 115 aa0.13□□□□□ -2.39
SMC4-223ENST00000493695 NDUFA6P56556 154 aa0.13□□□□□ -2.39
SMC4-223ENST00000493695 MAXP61244 160 aa0.13□□□□□ -2.39
SMC4-223ENST00000493695 CCSMST1Q4G0I0 132 aa0.13□□□□□ -2.39
SMC4-223ENST00000493695 TRIQKQ629K1 86 aa0.13□□□□□ -2.39
SMC4-223ENST00000493695 PRELID3AQ96N28 172 aa0.13□□□□□ -2.39
SMC4-223ENST00000493695 CIB3Q96Q77 187 aaPredicted RBP0.13□□□□□ -2.39
SMC4-223ENST00000493695 LOC285556D6RIA3 1793 aa0.13□□□□□ -2.39
SMC4-223ENST00000493695 KNTC1P50748 2209 aa0.13□□□□□ -2.39
SMC4-223ENST00000493695 SPTBP11277 2137 aa0.13□□□□□ -2.39
SMC4-223ENST00000493695 ANK1P16157 1881 aa0.12□□□□□ -2.39
SMC4-223ENST00000493695 TRBV27A0A0K0K1C4 114 aa0.12□□□□□ -2.39
SMC4-223ENST00000493695 SULT1C4O75897 302 aa0.12□□□□□ -2.39
SMC4-223ENST00000493695 GYPBP06028 91 aa0.12□□□□□ -2.39
SMC4-223ENST00000493695 G0S2P27469 103 aa0.12□□□□□ -2.39
SMC4-223ENST00000493695 S100A11P31949 105 aa0.12□□□□□ -2.39
SMC4-223ENST00000493695 SDC2P34741 201 aa0.12□□□□□ -2.39
SMC4-223ENST00000493695 GLYATL3Q5SZD4 288 aa0.12□□□□□ -2.39
SMC4-223ENST00000493695 CSAG1Q6PB30 78 aa0.12□□□□□ -2.39
SMC4-223ENST00000493695 ANGPTL5Q86XS5 388 aa0.12□□□□□ -2.39
SMC4-223ENST00000493695 C5orf17Q8NAS9 161 aa0.12□□□□□ -2.39
SMC4-223ENST00000493695 OR5H6Q8NGV6 325 aa0.12□□□□□ -2.39
SMC4-223ENST00000493695 NABP2Q9BQ15 211 aa0.12□□□□□ -2.39
SMC4-223ENST00000493695 SMPXQ9UHP9 88 aa0.12□□□□□ -2.39
SMC4-223ENST00000493695 LAMTOR2Q9Y2Q5 125 aa0.12□□□□□ -2.39
SMC4-223ENST00000493695 WDR97A6NE52 1622 aa0.12□□□□□ -2.39
SMC4-223ENST00000493695 BCORL1Q5H9F3 1711 aa0.11□□□□□ -2.39
SMC4-223ENST00000493695 SIPA1L2Q9P2F8 1722 aaPredicted RBP0.11□□□□□ -2.39
SMC4-223ENST00000493695 NBDYA0A0U1RRE5 68 aa0.11□□□□□ -2.39
SMC4-223ENST00000493695 C3orf85A0A1B0GTC6 90 aa0.11□□□□□ -2.39
SMC4-223ENST00000493695 TPT1P13693 172 aaKnown RBP0.11□□□□□ -2.39
SMC4-223ENST00000493695 RPL37P61927 97 aaKnown RBP0.11□□□□□ -2.39
SMC4-223ENST00000493695 ASB16-AS1Q495Z4 193 aa0.11□□□□□ -2.39
SMC4-223ENST00000493695 PPP1R2P3Q6NXS1 205 aa0.11□□□□□ -2.39
SMC4-223ENST00000493695 TCTEX1D1Q8N7M0 179 aa0.11□□□□□ -2.39
SMC4-223ENST00000493695 MORN4Q8NDC4 146 aa0.11□□□□□ -2.39
SMC4-223ENST00000493695 PCBD2Q9H0N5 130 aa0.11□□□□□ -2.39
SMC4-223ENST00000493695 MRPL35Q9NZE8 188 aaKnown RBP0.11□□□□□ -2.39
SMC4-223ENST00000493695 MED31Q9Y3C7 131 aa0.11□□□□□ -2.39
SMC4-223ENST00000493695 MPC1Q9Y5U8 109 aa0.11□□□□□ -2.39
SMC4-223ENST00000493695 FGD6Q6ZV73 1430 aa0.11□□□□□ -2.39
SMC4-223ENST00000493695 DSPPQ9NZW4 1301 aa0.11□□□□□ -2.39
SMC4-223ENST00000493695 LY6G6CO95867 125 aa0.1□□□□□ -2.39
SMC4-223ENST00000493695 IGF2P01344 180 aa0.1□□□□□ -2.39
SMC4-223ENST00000493695 EVI2AP22794 236 aa0.1□□□□□ -2.39
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms