RNA–Protein interactions for RNA: ENST00000493426.1

EWSR1-220, Transcript of EWS RNA binding protein 1, humanhuman

TSL 3

Gene EWSR1, Length 581 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EWSR1-220ENST00000493426 LINC01549A6NIU2 74 aa5.27□□□□□ -1.57
EWSR1-220ENST00000493426 NCBP2LA6PVI3 153 aaKnown RBP5.27□□□□□ -1.57
EWSR1-220ENST00000493426 F8VRH5 84 aa5.27□□□□□ -1.57
EWSR1-220ENST00000493426 IGKV1-17P01599 117 aa5.27□□□□□ -1.57
EWSR1-220ENST00000493426 CD7P09564 240 aa5.27□□□□□ -1.57
EWSR1-220ENST00000493426 EGR2P11161 476 aaPredicted RBP5.27□□□□□ -1.57
EWSR1-220ENST00000493426 RPL27AP46776 148 aaKnown RBP5.27□□□□□ -1.57
EWSR1-220ENST00000493426 OTOGLQ3ZCN5 2332 aa5.27□□□□□ -1.57
EWSR1-220ENST00000493426 TM4SF20Q53R12 229 aa5.27□□□□□ -1.57
EWSR1-220ENST00000493426 PCSK5Q92824 1860 aa5.27□□□□□ -1.57
EWSR1-220ENST00000493426 PRR25Q96S07 402 aa5.27□□□□□ -1.57
EWSR1-220ENST00000493426 FOXC2Q99958 501 aa5.27□□□□□ -1.57
EWSR1-220ENST00000493426 FSCN3Q9NQT6 498 aa5.27□□□□□ -1.57
EWSR1-220ENST00000493426 MRPL35Q9NZE8 188 aaKnown RBP5.27□□□□□ -1.57
EWSR1-220ENST00000493426 SPRR3Q9UBC9 169 aa5.27□□□□□ -1.57
EWSR1-220ENST00000493426 TRAV40A0A0B4J280 105 aa5.26□□□□□ -1.57
EWSR1-220ENST00000493426 A8MWV9 139 aa5.26□□□□□ -1.57
EWSR1-220ENST00000493426 LYZL6O75951 148 aa5.26□□□□□ -1.57
EWSR1-220ENST00000493426 LGALS1P09382 135 aaKnown RBP5.26□□□□□ -1.57
EWSR1-220ENST00000493426 GATA3P23771 443 aa5.26□□□□□ -1.57
EWSR1-220ENST00000493426 FHL3Q13643 280 aa5.26□□□□□ -1.57
EWSR1-220ENST00000493426 LAGE3Q14657 143 aa5.26□□□□□ -1.57
EWSR1-220ENST00000493426 MSMPQ1L6U9 139 aa5.26□□□□□ -1.57
EWSR1-220ENST00000493426 C10orf55Q5SWW7 151 aa5.26□□□□□ -1.57
EWSR1-220ENST00000493426 RUSC1-AS1Q66K80 236 aa5.26□□□□□ -1.57
EWSR1-220ENST00000493426 IL17RELQ6ZVW7 336 aa5.26□□□□□ -1.57
EWSR1-220ENST00000493426 ZNF491Q8N8L2 437 aa5.26□□□□□ -1.57
EWSR1-220ENST00000493426 HES7Q9BYE0 225 aa5.26□□□□□ -1.57
EWSR1-220ENST00000493426 TTTY13Q9BZ97 58 aa5.26□□□□□ -1.57
EWSR1-220ENST00000493426 AAMDCQ9H7C9 122 aa5.26□□□□□ -1.57
EWSR1-220ENST00000493426 RALYQ9UKM9 306 aaKnown RBP5.26□□□□□ -1.57
EWSR1-220ENST00000493426 PROCRQ9UNN8 238 aa5.26□□□□□ -1.57
EWSR1-220ENST00000493426 TNFRSF18Q9Y5U5 241 aa5.26□□□□□ -1.57
EWSR1-220ENST00000493426 SLC25A15Q9Y619 301 aa5.26□□□□□ -1.57
EWSR1-220ENST00000493426 PCNX2A6NKB5 2137 aa5.26□□□□□ -1.57
EWSR1-220ENST00000493426 EP300Q09472 2414 aaPredicted RBP5.25□□□□□ -1.57
EWSR1-220ENST00000493426 RBAKDNA6NC62 111 aa5.25□□□□□ -1.57
EWSR1-220ENST00000493426 PRSS29PA6NIE9 313 aa5.25□□□□□ -1.57
EWSR1-220ENST00000493426 FABP5P3A8MUU1 101 aa5.25□□□□□ -1.57
EWSR1-220ENST00000493426 TEX22C9J3V5 150 aa5.25□□□□□ -1.57
EWSR1-220ENST00000493426 FCN3O75636 299 aa5.25□□□□□ -1.57
EWSR1-220ENST00000493426 RBP4P02753 201 aa5.25□□□□□ -1.57
EWSR1-220ENST00000493426 P0DMU3 169 aa5.25□□□□□ -1.57
EWSR1-220ENST00000493426 FAM231AP0DMU4 169 aa5.25□□□□□ -1.57
EWSR1-220ENST00000493426 FAM231CP0DMU5 169 aa5.25□□□□□ -1.57
EWSR1-220ENST00000493426 COX6B1P14854 86 aa5.25□□□□□ -1.57
EWSR1-220ENST00000493426 DLX6P56179 175 aa5.25□□□□□ -1.57
EWSR1-220ENST00000493426 LYZP61626 148 aa5.25□□□□□ -1.57
EWSR1-220ENST00000493426 GAGE2BQ13066 116 aa5.25□□□□□ -1.57
EWSR1-220ENST00000493426 LY6DQ14210 128 aa5.25□□□□□ -1.57
EWSR1-220ENST00000493426 GAGE2EQ4V326 116 aa5.25□□□□□ -1.57
EWSR1-220ENST00000493426 PAPPA-AS1Q5QFB9 102 aa5.25□□□□□ -1.57
EWSR1-220ENST00000493426 Q71RC1 249 aaPredicted RBP5.25□□□□□ -1.57
EWSR1-220ENST00000493426 NRACQ8N912 160 aa5.25□□□□□ -1.57
EWSR1-220ENST00000493426 AJUBAQ96IF1 538 aa5.25□□□□□ -1.57
EWSR1-220ENST00000493426 RASL11BQ9BPW5 248 aa5.25□□□□□ -1.57
EWSR1-220ENST00000493426 RAB1BQ9H0U4 201 aa5.25□□□□□ -1.57
EWSR1-220ENST00000493426 TMEM160Q9NX00 188 aa5.25□□□□□ -1.57
EWSR1-220ENST00000493426 GAGE2DQ9UEU5 116 aa5.25□□□□□ -1.57
EWSR1-220ENST00000493426 SIGLEC9Q9Y336 463 aa5.25□□□□□ -1.57
EWSR1-220ENST00000493426 UFC1Q9Y3C8 167 aa5.25□□□□□ -1.57
EWSR1-220ENST00000493426 H3BTX0 84 aa5.24□□□□□ -1.57
EWSR1-220ENST00000493426 CD59P13987 128 aa5.24□□□□□ -1.57
EWSR1-220ENST00000493426 RPL13AP40429 203 aaKnown RBP5.24□□□□□ -1.57
EWSR1-220ENST00000493426 NDUFV3P56181 108 aaKnown RBP5.24□□□□□ -1.57
EWSR1-220ENST00000493426 TNP2Q05952 138 aa5.24□□□□□ -1.57
EWSR1-220ENST00000493426 SPRNQ5BIV9 151 aa5.24□□□□□ -1.57
EWSR1-220ENST00000493426 TMEM78Q5T7P6 136 aa5.24□□□□□ -1.57
EWSR1-220ENST00000493426 LCE2CQ5TA81 110 aa5.24□□□□□ -1.57
EWSR1-220ENST00000493426 TMEM200BQ69YZ2 307 aa5.24□□□□□ -1.57
EWSR1-220ENST00000493426 HCP5Q6MZN7 132 aa5.24□□□□□ -1.57
EWSR1-220ENST00000493426 NDUFA11Q86Y39 141 aa5.24□□□□□ -1.57
EWSR1-220ENST00000493426 NEXN-AS1Q8NBZ9 246 aa5.24□□□□□ -1.57
EWSR1-220ENST00000493426 IGFBPL1Q8WX77 278 aa5.24□□□□□ -1.57
EWSR1-220ENST00000493426 C8orf49Q96NF6 230 aa5.24□□□□□ -1.57
EWSR1-220ENST00000493426 CCL13Q99616 98 aa5.24□□□□□ -1.57
EWSR1-220ENST00000493426 ASCL2Q99929 193 aa5.24□□□□□ -1.57
EWSR1-220ENST00000493426 TMEM126AQ9H061 195 aa5.24□□□□□ -1.57
EWSR1-220ENST00000493426 DEFB127Q9H1M4 99 aa5.24□□□□□ -1.57
EWSR1-220ENST00000493426 FBXL15Q9H469 300 aa5.24□□□□□ -1.57
EWSR1-220ENST00000493426 SS18L2Q9UHA2 77 aa5.24□□□□□ -1.57
EWSR1-220ENST00000493426 PTPRZ1P23471 2315 aaPredicted RBP5.24□□□□□ -1.57
EWSR1-220ENST00000493426 DSCAML1Q8TD84 2053 aa5.24□□□□□ -1.57
EWSR1-220ENST00000493426 CEP250Q9BV73 2442 aa5.23□□□□□ -1.57
EWSR1-220ENST00000493426 B5MCH6 92 aa5.23□□□□□ -1.57
EWSR1-220ENST00000493426 SMKR1H3BMG3 65 aa5.23□□□□□ -1.57
EWSR1-220ENST00000493426 K7EIM0 57 aa5.23□□□□□ -1.57
EWSR1-220ENST00000493426 IGHV3-48P01763 117 aa5.23□□□□□ -1.57
EWSR1-220ENST00000493426 SCGB1C2P0DMR2 95 aa5.23□□□□□ -1.57
EWSR1-220ENST00000493426 IFITM1P13164 125 aa5.23□□□□□ -1.57
EWSR1-220ENST00000493426 RPL7P18124 248 aaKnown RBP5.23□□□□□ -1.57
EWSR1-220ENST00000493426 HLA-DMBP28068 263 aa5.23□□□□□ -1.57
EWSR1-220ENST00000493426 FXYD7P58549 80 aa5.23□□□□□ -1.57
EWSR1-220ENST00000493426 RPL32P62910 135 aaKnown RBP5.23□□□□□ -1.57
EWSR1-220ENST00000493426 TNFAIP6P98066 277 aaPredicted RBP5.23□□□□□ -1.57
EWSR1-220ENST00000493426 ORMDL2Q53FV1 153 aa5.23□□□□□ -1.57
EWSR1-220ENST00000493426 FAM201AQ5SY85 155 aa5.23□□□□□ -1.57
EWSR1-220ENST00000493426 SHISA2Q6UWI4 295 aa5.23□□□□□ -1.57
EWSR1-220ENST00000493426 DTX2Q86UW9 622 aa5.23□□□□□ -1.57
EWSR1-220ENST00000493426 C10orf126Q8N4M7 172 aa5.23□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms