RNA–Protein interactions for RNA: ENST00000492468.5

PABPC4-216, Transcript of poly(A) binding protein cytoplasmic 4, humanhuman

TSL 2

Gene PABPC4, Length 2,257 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC4-216ENST00000492468 TRAV40A0A0B4J280 105 aa11.53□□□□□ -0.56
PABPC4-216ENST00000492468 INSL3P51460 131 aa11.53□□□□□ -0.56
PABPC4-216ENST00000492468 SRSF6Q13247 344 aaKnown RBP11.53□□□□□ -0.56
PABPC4-216ENST00000492468 TTC9CQ8N5M4 171 aa11.53□□□□□ -0.56
PABPC4-216ENST00000492468 Q8TAT8 98 aa11.53□□□□□ -0.56
PABPC4-216ENST00000492468 KAAG1Q9UBP8 84 aa11.53□□□□□ -0.56
PABPC4-216ENST00000492468 GPR179Q6PRD1 2367 aa11.53□□□□□ -0.56
PABPC4-216ENST00000492468 LINC01619G3V211 115 aa11.53□□□□□ -0.56
PABPC4-216ENST00000492468 RAB1BQ9H0U4 201 aa11.53□□□□□ -0.56
PABPC4-216ENST00000492468 TMEM160Q9NX00 188 aa11.53□□□□□ -0.56
PABPC4-216ENST00000492468 GATA1P15976 413 aaPredicted RBP11.52□□□□□ -0.56
PABPC4-216ENST00000492468 FAM27E3Q08E93 113 aa11.52□□□□□ -0.56
PABPC4-216ENST00000492468 TMEM108Q6UXF1 575 aa11.52□□□□□ -0.56
PABPC4-216ENST00000492468 CCL17Q92583 94 aa11.52□□□□□ -0.56
PABPC4-216ENST00000492468 MRAP2Q96G30 205 aa11.52□□□□□ -0.56
PABPC4-216ENST00000492468 DLX1P56177 255 aa11.52□□□□□ -0.57
PABPC4-216ENST00000492468 ZFHX4Q86UP3 3567 aa11.51□□□□□ -0.57
PABPC4-216ENST00000492468 BUB1B-PAK6H3BSN5 160 aa11.51□□□□□ -0.57
PABPC4-216ENST00000492468 ATP5G2Q06055 141 aa11.51□□□□□ -0.57
PABPC4-216ENST00000492468 MTURNQ8N3F0 131 aa11.51□□□□□ -0.57
PABPC4-216ENST00000492468 IGHG4P01861 327 aa11.51□□□□□ -0.57
PABPC4-216ENST00000492468 SCGB2A2Q13296 93 aa11.51□□□□□ -0.57
PABPC4-216ENST00000492468 GFRALQ6UXV0 394 aa11.51□□□□□ -0.57
PABPC4-216ENST00000492468 WFDC12Q8WWY7 111 aa11.51□□□□□ -0.57
PABPC4-216ENST00000492468 HIST1H4GQ99525 98 aa11.51□□□□□ -0.57
PABPC4-216ENST00000492468 A0A087WX48 190 aa11.5□□□□□ -0.57
PABPC4-216ENST00000492468 Q5PR19 223 aa11.5□□□□□ -0.57
PABPC4-216ENST00000492468 RNF5Q99942 180 aa11.5□□□□□ -0.57
PABPC4-216ENST00000492468 PRSS47A8MTI9 375 aa11.49□□□□□ -0.57
PABPC4-216ENST00000492468 ORM1P02763 201 aa11.49□□□□□ -0.57
PABPC4-216ENST00000492468 PRB3Q04118 309 aaPredicted RBP11.49□□□□□ -0.57
PABPC4-216ENST00000492468 Q6ZS92 163 aa11.49□□□□□ -0.57
PABPC4-216ENST00000492468 DTX2Q86UW9 622 aa11.49□□□□□ -0.57
PABPC4-216ENST00000492468 ATP6V0E2Q8NHE4 81 aa11.49□□□□□ -0.57
PABPC4-216ENST00000492468 ZNF48Q96MX3 618 aaPredicted RBP11.49□□□□□ -0.57
PABPC4-216ENST00000492468 CDX4O14627 284 aaPredicted RBP11.49□□□□□ -0.57
PABPC4-216ENST00000492468 CNIH1O95406 144 aa11.49□□□□□ -0.57
PABPC4-216ENST00000492468 RPL7P18124 248 aaKnown RBP11.49□□□□□ -0.57
PABPC4-216ENST00000492468 MORN3Q6PF18 240 aaPredicted RBP11.49□□□□□ -0.57
PABPC4-216ENST00000492468 C20orf78Q9BR46 151 aa11.49□□□□□ -0.57
PABPC4-216ENST00000492468 S4R3C0 116 aa11.49□□□□□ -0.57
PABPC4-216ENST00000492468 LOC400499M0QZD8 3231 aa11.49□□□□□ -0.57
PABPC4-216ENST00000492468 TRAV26-1A0A087WT03 109 aa11.48□□□□□ -0.57
PABPC4-216ENST00000492468 F8W735 103 aaPredicted RBP11.48□□□□□ -0.57
PABPC4-216ENST00000492468 PLNP26678 52 aa11.48□□□□□ -0.57
PABPC4-216ENST00000492468 C1QTNF4Q9BXJ3 329 aa11.48□□□□□ -0.57
PABPC4-216ENST00000492468 MRPL16Q9NX20 251 aaKnown RBP11.48□□□□□ -0.57
PABPC4-216ENST00000492468 COLQQ9Y215 455 aaPredicted RBP11.48□□□□□ -0.57
PABPC4-216ENST00000492468 FABP5P3A8MUU1 101 aa11.48□□□□□ -0.57
PABPC4-216ENST00000492468 APOMO95445 188 aa11.48□□□□□ -0.57
PABPC4-216ENST00000492468 LAGE3Q14657 143 aa11.48□□□□□ -0.57
PABPC4-216ENST00000492468 MYOZ3Q8TDC0 251 aa11.48□□□□□ -0.57
PABPC4-216ENST00000492468 CDIP1Q9H305 208 aa11.48□□□□□ -0.57
PABPC4-216ENST00000492468 NCOR1O75376 2440 aa11.48□□□□□ -0.57
PABPC4-216ENST00000492468 ZGRF1Q86YA3 2104 aa11.48□□□□□ -0.57
PABPC4-216ENST00000492468 WDFY4Q6ZS81 3184 aa11.48□□□□□ -0.57
PABPC4-216ENST00000492468 CFAP47Q6ZTR5 3102 aa11.47□□□□□ -0.57
PABPC4-216ENST00000492468 ROS1P08922 2347 aa11.47□□□□□ -0.57
PABPC4-216ENST00000492468 NCBP2LA6PVI3 153 aaKnown RBP11.47□□□□□ -0.57
PABPC4-216ENST00000492468 FOXI1Q12951 378 aa11.47□□□□□ -0.57
PABPC4-216ENST00000492468 NRACQ8N912 160 aa11.47□□□□□ -0.57
PABPC4-216ENST00000492468 RPEQ96AT9 228 aa11.47□□□□□ -0.57
PABPC4-216ENST00000492468 SMAD5-AS1Q9Y6J3 95 aa11.47□□□□□ -0.57
PABPC4-216ENST00000492468 HLA-DMBP28068 263 aa11.47□□□□□ -0.57
PABPC4-216ENST00000492468 KLRD1Q13241 179 aa11.47□□□□□ -0.57
PABPC4-216ENST00000492468 ZNF672Q499Z4 452 aaPredicted RBP11.47□□□□□ -0.57
PABPC4-216ENST00000492468 CFAP126Q5VTH2 177 aa11.47□□□□□ -0.57
PABPC4-216ENST00000492468 C8orf86Q6ZUL3 223 aa11.47□□□□□ -0.57
PABPC4-216ENST00000492468 IL17RELQ6ZVW7 336 aa11.47□□□□□ -0.57
PABPC4-216ENST00000492468 LY6LH3BQJ8 138 aa11.46□□□□□ -0.57
PABPC4-216ENST00000492468 SMCPP49901 116 aaPredicted RBP11.46□□□□□ -0.57
PABPC4-216ENST00000492468 CRYBA4P53673 196 aa11.46□□□□□ -0.57
PABPC4-216ENST00000492468 MFAP4P55083 255 aa11.46□□□□□ -0.57
PABPC4-216ENST00000492468 FANCD2OSQ96PS1 177 aa11.46□□□□□ -0.57
PABPC4-216ENST00000492468 GEMIN7Q9H840 131 aaKnown RBP11.46□□□□□ -0.57
PABPC4-216ENST00000492468 SMG1Q96Q15 3661 aaKnown RBP11.46□□□□□ -0.58
PABPC4-216ENST00000492468 IGLV11-55A0A075B6I3 123 aa11.46□□□□□ -0.58
PABPC4-216ENST00000492468 IGFL4Q6B9Z1 124 aa11.46□□□□□ -0.58
PABPC4-216ENST00000492468 TRAV12-1A0A0B4J245 112 aa11.45□□□□□ -0.58
PABPC4-216ENST00000492468 MYMXA0A1B0GTQ4 84 aa11.45□□□□□ -0.58
PABPC4-216ENST00000492468 NDUFA3O95167 84 aa11.45□□□□□ -0.58
PABPC4-216ENST00000492468 TRGV3P03979 118 aa11.45□□□□□ -0.58
PABPC4-216ENST00000492468 PPIFP30405 207 aaKnown RBP11.45□□□□□ -0.58
PABPC4-216ENST00000492468 ZNF418Q8TF45 676 aaPredicted RBP11.45□□□□□ -0.58
PABPC4-216ENST00000492468 ZNF318Q5VUA4 2279 aa11.45□□□□□ -0.58
PABPC4-216ENST00000492468 TRIOBPQ9H2D6 2365 aa11.45□□□□□ -0.58
PABPC4-216ENST00000492468 CUL9Q8IWT3 2517 aa11.44□□□□□ -0.58
PABPC4-216ENST00000492468 F8VRH5 84 aa11.44□□□□□ -0.58
PABPC4-216ENST00000492468 COX7A1P24310 79 aa11.44□□□□□ -0.58
PABPC4-216ENST00000492468 BSPH1Q075Z2 132 aa11.44□□□□□ -0.58
PABPC4-216ENST00000492468 DYNAPQ8N1N2 210 aa11.44□□□□□ -0.58
PABPC4-216ENST00000492468 SYT8Q8NBV8 401 aa11.44□□□□□ -0.58
PABPC4-216ENST00000492468 CFHR4Q92496 578 aa11.44□□□□□ -0.58
PABPC4-216ENST00000492468 OR11H12B2RN74 326 aa11.44□□□□□ -0.58
PABPC4-216ENST00000492468 EFNA4P52798 201 aa11.44□□□□□ -0.58
PABPC4-216ENST00000492468 PLA2G2CQ5R387 149 aa11.44□□□□□ -0.58
PABPC4-216ENST00000492468 LCNL1Q6ZST4 164 aa11.44□□□□□ -0.58
PABPC4-216ENST00000492468 OR11H1Q8NG94 326 aa11.44□□□□□ -0.58
PABPC4-216ENST00000492468 OR11H2Q8NH07 326 aa11.44□□□□□ -0.58
PABPC4-216ENST00000492468 SH3BGRL2Q9UJC5 107 aa11.44□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 99 ms