RNA–Protein interactions for RNA: ENST00000490099.5

TMEM39A-210, Transcript of transmembrane protein 39A, humanhuman

TSL 3

Gene TMEM39A, Length 868 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-210ENST00000490099 ODF3Q96PU9 254 aa6.85□□□□□ -1.31
TMEM39A-210ENST00000490099 C20orf144Q9BQM9 153 aa6.85□□□□□ -1.31
TMEM39A-210ENST00000490099 TMEM208Q9BTX3 173 aa6.85□□□□□ -1.31
TMEM39A-210ENST00000490099 WDR61Q9GZS3 305 aaKnown RBP6.85□□□□□ -1.31
TMEM39A-210ENST00000490099 SLC39A9Q9NUM3 307 aa6.85□□□□□ -1.31
TMEM39A-210ENST00000490099 TIMM9Q9Y5J7 89 aa6.85□□□□□ -1.31
TMEM39A-210ENST00000490099 PXMP4Q9Y6I8 212 aa6.85□□□□□ -1.31
TMEM39A-210ENST00000490099 DNAH17Q9UFH2 4485 aa6.84□□□□□ -1.31
TMEM39A-210ENST00000490099 TRAV5A0A0B4J249 113 aa6.84□□□□□ -1.31
TMEM39A-210ENST00000490099 SLC17A3O00476 420 aa6.84□□□□□ -1.31
TMEM39A-210ENST00000490099 RTL8CO15255 209 aa6.84□□□□□ -1.31
TMEM39A-210ENST00000490099 CDKN1BP46527 198 aa6.84□□□□□ -1.31
TMEM39A-210ENST00000490099 DAD1P61803 113 aa6.84□□□□□ -1.31
TMEM39A-210ENST00000490099 TMEM88Q6PEY1 159 aa6.84□□□□□ -1.31
TMEM39A-210ENST00000490099 Q6ZRG5 221 aa6.84□□□□□ -1.31
TMEM39A-210ENST00000490099 LRRC20Q8TCA0 184 aa6.84□□□□□ -1.31
TMEM39A-210ENST00000490099 RNASE8Q8TDE3 154 aaKnown RBP6.84□□□□□ -1.31
TMEM39A-210ENST00000490099 MRPL53Q96EL3 112 aaKnown RBP6.84□□□□□ -1.31
TMEM39A-210ENST00000490099 PHYHIPLQ96FC7 376 aa6.84□□□□□ -1.31
TMEM39A-210ENST00000490099 PSMG3Q9BT73 122 aaPredicted RBP6.84□□□□□ -1.31
TMEM39A-210ENST00000490099 KRTAP17-1Q9BYP8 105 aa6.84□□□□□ -1.31
TMEM39A-210ENST00000490099 WFDC1Q9HC57 220 aa6.84□□□□□ -1.31
TMEM39A-210ENST00000490099 CYTL1Q9NRR1 136 aa6.84□□□□□ -1.31
TMEM39A-210ENST00000490099 ZNF586Q9NXT0 402 aa6.84□□□□□ -1.31
TMEM39A-210ENST00000490099 TMEM14CQ9P0S9 112 aa6.84□□□□□ -1.31
TMEM39A-210ENST00000490099 CBY3A6NI87 242 aa6.83□□□□□ -1.32
TMEM39A-210ENST00000490099 NPIPB6E9PJ23 425 aa6.83□□□□□ -1.32
TMEM39A-210ENST00000490099 H7BYZ3 331 aa6.83□□□□□ -1.32
TMEM39A-210ENST00000490099 NDUFB4O95168 129 aa6.83□□□□□ -1.32
TMEM39A-210ENST00000490099 IFNA7P01567 189 aa6.83□□□□□ -1.32
TMEM39A-210ENST00000490099 SEC11BP0C7V7 166 aa6.83□□□□□ -1.32
TMEM39A-210ENST00000490099 CT45A10P0DMU9 189 aa6.83□□□□□ -1.32
TMEM39A-210ENST00000490099 FAM3BP58499 235 aaPredicted RBP6.83□□□□□ -1.32
TMEM39A-210ENST00000490099 RHOBP62745 196 aa6.83□□□□□ -1.32
TMEM39A-210ENST00000490099 SERF2P84101 59 aa6.83□□□□□ -1.32
TMEM39A-210ENST00000490099 KIR3DS1Q14943 382 aa6.83□□□□□ -1.32
TMEM39A-210ENST00000490099 C15orf53Q8NAA6 179 aa6.83□□□□□ -1.32
TMEM39A-210ENST00000490099 HSD17B11Q8NBQ5 300 aa6.83□□□□□ -1.32
TMEM39A-210ENST00000490099 OR1L4Q8NGR5 311 aa6.83□□□□□ -1.32
TMEM39A-210ENST00000490099 LINC01587Q99440 93 aa6.83□□□□□ -1.32
TMEM39A-210ENST00000490099 PFDN5Q99471 154 aa6.83□□□□□ -1.32
TMEM39A-210ENST00000490099 NPCDR1Q9BY65 106 aa6.83□□□□□ -1.32
TMEM39A-210ENST00000490099 FAT2Q9NYQ8 4349 aa6.82□□□□□ -1.32
TMEM39A-210ENST00000490099 NACAE9PAV3 2078 aa6.82□□□□□ -1.32
TMEM39A-210ENST00000490099 TRBV19A0A075B6N1 114 aa6.82□□□□□ -1.32
TMEM39A-210ENST00000490099 UMAD1C9J7I0 102 aa6.82□□□□□ -1.32
TMEM39A-210ENST00000490099 MBP02144 154 aa6.82□□□□□ -1.32
TMEM39A-210ENST00000490099 SNRPCP09234 159 aaKnown RBP6.82□□□□□ -1.32
TMEM39A-210ENST00000490099 HTN3P15516 51 aa6.82□□□□□ -1.32
TMEM39A-210ENST00000490099 ATP6V0CP27449 155 aa6.82□□□□□ -1.32
TMEM39A-210ENST00000490099 GFI1BQ5VTD9 330 aa6.82□□□□□ -1.32
TMEM39A-210ENST00000490099 OR2G3Q8NGZ4 309 aa6.82□□□□□ -1.32
TMEM39A-210ENST00000490099 TMEM263Q8WUH6 116 aaKnown RBP6.82□□□□□ -1.32
TMEM39A-210ENST00000490099 C16orf74Q96GX8 76 aa6.82□□□□□ -1.32
TMEM39A-210ENST00000490099 FAM167A-AS1Q96KT0 104 aa6.82□□□□□ -1.32
TMEM39A-210ENST00000490099 FAM19A4Q96LR4 140 aa6.82□□□□□ -1.32
TMEM39A-210ENST00000490099 TIMM8BQ9Y5J9 83 aaPredicted RBP6.82□□□□□ -1.32
TMEM39A-210ENST00000490099 HECTD4Q9Y4D8 3996 aa6.81□□□□□ -1.32
TMEM39A-210ENST00000490099 HERC2O95714 4834 aa6.81□□□□□ -1.32
TMEM39A-210ENST00000490099 KIAA1109Q2LD37 5005 aa6.81□□□□□ -1.32
TMEM39A-210ENST00000490099 H3BTX0 84 aa6.81□□□□□ -1.32
TMEM39A-210ENST00000490099 DEFB130BP0DP73 79 aa6.81□□□□□ -1.32
TMEM39A-210ENST00000490099 DEFB130AP0DP74 79 aa6.81□□□□□ -1.32
TMEM39A-210ENST00000490099 PRB4P10163 310 aaPredicted RBP6.81□□□□□ -1.32
TMEM39A-210ENST00000490099 HIST1H1EP10412 219 aaKnown RBP6.81□□□□□ -1.32
TMEM39A-210ENST00000490099 RAB5CP51148 216 aa6.81□□□□□ -1.32
TMEM39A-210ENST00000490099 PDE6HQ13956 83 aa6.81□□□□□ -1.32
TMEM39A-210ENST00000490099 AKR1C8PQ5T2L2 129 aa6.81□□□□□ -1.32
TMEM39A-210ENST00000490099 TEX261Q6UWH6 196 aa6.81□□□□□ -1.32
TMEM39A-210ENST00000490099 OR10J6PQ8NGY7 276 aa6.81□□□□□ -1.32
TMEM39A-210ENST00000490099 PPP1R14DQ9NXH3 145 aa6.81□□□□□ -1.32
TMEM39A-210ENST00000490099 PRELID1Q9Y255 219 aa6.81□□□□□ -1.32
TMEM39A-210ENST00000490099 DNAH2Q9P225 4427 aa6.8□□□□□ -1.32
TMEM39A-210ENST00000490099 KLLNB2CW77 178 aa6.8□□□□□ -1.32
TMEM39A-210ENST00000490099 ATP5G1P05496 136 aa6.8□□□□□ -1.32
TMEM39A-210ENST00000490099 NMBP08949 121 aa6.8□□□□□ -1.32
TMEM39A-210ENST00000490099 ATP5G3P48201 142 aa6.8□□□□□ -1.32
TMEM39A-210ENST00000490099 DAZ2Q13117 558 aaKnown RBP6.8□□□□□ -1.32
TMEM39A-210ENST00000490099 ACOT6Q3I5F7 207 aaPredicted RBP6.8□□□□□ -1.32
TMEM39A-210ENST00000490099 GCSAMLQ5JQS6 135 aa6.8□□□□□ -1.32
TMEM39A-210ENST00000490099 FFAR4Q5NUL3 377 aa6.8□□□□□ -1.32
TMEM39A-210ENST00000490099 DPPA3Q6W0C5 159 aa6.8□□□□□ -1.32
TMEM39A-210ENST00000490099 C9orf47Q6ZRZ4 202 aa6.8□□□□□ -1.32
TMEM39A-210ENST00000490099 TMED6Q8WW62 240 aa6.8□□□□□ -1.32
TMEM39A-210ENST00000490099 LINC00467Q9BRT7 94 aa6.8□□□□□ -1.32
TMEM39A-210ENST00000490099 F5H768 121 aa6.79□□□□□ -1.32
TMEM39A-210ENST00000490099 M0R2N4 97 aa6.79□□□□□ -1.32
TMEM39A-210ENST00000490099 M0R3E3 92 aa6.79□□□□□ -1.32
TMEM39A-210ENST00000490099 ZNF324O75467 553 aaPredicted RBP6.79□□□□□ -1.32
TMEM39A-210ENST00000490099 SLC25A5P05141 298 aaKnown RBP6.79□□□□□ -1.32
TMEM39A-210ENST00000490099 CRISP2P16562 243 aa6.79□□□□□ -1.32
TMEM39A-210ENST00000490099 M6PRP20645 277 aa6.79□□□□□ -1.32
TMEM39A-210ENST00000490099 LEPP41159 167 aa6.79□□□□□ -1.32
TMEM39A-210ENST00000490099 ALKAL2Q6UX46 152 aa6.79□□□□□ -1.32
TMEM39A-210ENST00000490099 ZNF680Q8NEM1 530 aa6.79□□□□□ -1.32
TMEM39A-210ENST00000490099 ZNRF2Q8NHG8 242 aa6.79□□□□□ -1.32
TMEM39A-210ENST00000490099 RNF141Q8WVD5 230 aa6.79□□□□□ -1.32
TMEM39A-210ENST00000490099 ZNF503Q96F45 646 aa6.79□□□□□ -1.32
TMEM39A-210ENST00000490099 LINC00477Q96M19 166 aa6.79□□□□□ -1.32
TMEM39A-210ENST00000490099 C18orf15Q96N68 181 aa6.79□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 78 ms