RNA–Protein interactions for RNA: ENST00000489215.5

PTPN18-213, Transcript of protein tyrosine phosphatase, non-receptor type 18, humanhuman

TSL 4

Gene PTPN18, Length 460 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN18-213ENST00000489215 RBAKDNA6NC62 111 aa17.05■□□□□ 0.32
PTPN18-213ENST00000489215 PRM2P04554 102 aa17.05■□□□□ 0.32
PTPN18-213ENST00000489215 OR10G4Q8NGN3 311 aa17.05■□□□□ 0.32
PTPN18-213ENST00000489215 OR10G9Q8NGN4 311 aa17.05■□□□□ 0.32
PTPN18-213ENST00000489215 OR10G7Q8NGN6 311 aa17.05■□□□□ 0.32
PTPN18-213ENST00000489215 OR2G3Q8NGZ4 309 aa17.05■□□□□ 0.32
PTPN18-213ENST00000489215 RNASE8Q8TDE3 154 aaKnown RBP17.05■□□□□ 0.32
PTPN18-213ENST00000489215 PLA2G2EQ9NZK7 142 aa17.05■□□□□ 0.32
PTPN18-213ENST00000489215 ALMS1Q8TCU4 4167 aa17.05■□□□□ 0.32
PTPN18-213ENST00000489215 TRAV12-3A0A0B4J271 114 aa17.04■□□□□ 0.32
PTPN18-213ENST00000489215 PLAC8L1A1L4L8 177 aa17.04■□□□□ 0.32
PTPN18-213ENST00000489215 C7orf71A4D174 169 aa17.04■□□□□ 0.32
PTPN18-213ENST00000489215 CRISP2P16562 243 aa17.04■□□□□ 0.32
PTPN18-213ENST00000489215 ERCC8Q13216 396 aa17.04■□□□□ 0.32
PTPN18-213ENST00000489215 KIR3DS1Q14943 382 aa17.04■□□□□ 0.32
PTPN18-213ENST00000489215 ZNF503Q96F45 646 aa17.04■□□□□ 0.32
PTPN18-213ENST00000489215 PHYHIPLQ96FC7 376 aa17.04■□□□□ 0.32
PTPN18-213ENST00000489215 FAM19A4Q96LR4 140 aa17.04■□□□□ 0.32
PTPN18-213ENST00000489215 Q9H3A6 140 aa17.04■□□□□ 0.32
PTPN18-213ENST00000489215 CBY3A6NI87 242 aa17.03■□□□□ 0.32
PTPN18-213ENST00000489215 KLLNB2CW77 178 aa17.03■□□□□ 0.32
PTPN18-213ENST00000489215 J3KRW8 73 aa17.03■□□□□ 0.32
PTPN18-213ENST00000489215 GPX1P07203 203 aa17.03■□□□□ 0.32
PTPN18-213ENST00000489215 DEFB130BP0DP73 79 aa17.03■□□□□ 0.32
PTPN18-213ENST00000489215 DEFB130AP0DP74 79 aa17.03■□□□□ 0.32
PTPN18-213ENST00000489215 HTN3P15516 51 aa17.03■□□□□ 0.32
PTPN18-213ENST00000489215 ARL6IP6Q8N6S5 226 aa17.03■□□□□ 0.32
PTPN18-213ENST00000489215 OR2T35Q8NGX2 323 aa17.03■□□□□ 0.32
PTPN18-213ENST00000489215 ZNF492Q9P255 531 aa17.03■□□□□ 0.32
PTPN18-213ENST00000489215 BORCS7-ASMTA0A0B4J1R7 106 aa17.02■□□□□ 0.32
PTPN18-213ENST00000489215 SNURFLB1AK76 121 aa17.02■□□□□ 0.32
PTPN18-213ENST00000489215 HSD17B11Q8NBQ5 300 aa17.02■□□□□ 0.32
PTPN18-213ENST00000489215 ATP5G1P05496 136 aa17.01■□□□□ 0.31
PTPN18-213ENST00000489215 ATP5G3P48201 142 aa17.01■□□□□ 0.31
PTPN18-213ENST00000489215 ZNF138P52744 262 aa17.01■□□□□ 0.31
PTPN18-213ENST00000489215 Q5BKY6 102 aa17.01■□□□□ 0.31
PTPN18-213ENST00000489215 CMTM2Q8TAZ6 248 aa17.01■□□□□ 0.31
PTPN18-213ENST00000489215 GNPNAT1Q96EK6 184 aaPredicted RBP17.01■□□□□ 0.31
PTPN18-213ENST00000489215 LINC00467Q9BRT7 94 aa17.01■□□□□ 0.31
PTPN18-213ENST00000489215 OTORQ9NRC9 128 aa17.01■□□□□ 0.31
PTPN18-213ENST00000489215 IGKV2-40A0A087WW87 121 aaPredicted RBP17■□□□□ 0.31
PTPN18-213ENST00000489215 FXYD6-FXYD2A0A087WZ82 144 aa17■□□□□ 0.31
PTPN18-213ENST00000489215 IGKV2D-40P01614 121 aaPredicted RBP17■□□□□ 0.31
PTPN18-213ENST00000489215 CDC34P49427 236 aaPredicted RBP17■□□□□ 0.31
PTPN18-213ENST00000489215 RAB2AP61019 212 aa17■□□□□ 0.31
PTPN18-213ENST00000489215 C15orf53Q8NAA6 179 aa17■□□□□ 0.31
PTPN18-213ENST00000489215 ZNF680Q8NEM1 530 aa17■□□□□ 0.31
PTPN18-213ENST00000489215 VGLL1Q99990 258 aa17■□□□□ 0.31
PTPN18-213ENST00000489215 NOP10Q9NPE3 64 aaKnown RBP17■□□□□ 0.31
PTPN18-213ENST00000489215 TNFSF18Q9UNG2 199 aa17■□□□□ 0.31
PTPN18-213ENST00000489215 LENEPQ9Y5L5 61 aa17■□□□□ 0.31
PTPN18-213ENST00000489215 ZNF324O75467 553 aaPredicted RBP16.99■□□□□ 0.31
PTPN18-213ENST00000489215 ATP6V0CP27449 155 aa16.99■□□□□ 0.31
PTPN18-213ENST00000489215 RNASE4P34096 147 aaKnown RBP16.99■□□□□ 0.31
PTPN18-213ENST00000489215 POM121L12Q8N7R1 296 aa16.98■□□□□ 0.31
PTPN18-213ENST00000489215 TMED6Q8WW62 240 aa16.98■□□□□ 0.31
PTPN18-213ENST00000489215 PGPA6NDG6 321 aa16.97■□□□□ 0.31
PTPN18-213ENST00000489215 DIRC3C9JPN6 131 aa16.97■□□□□ 0.31
PTPN18-213ENST00000489215 TAAR5O14804 337 aa16.97■□□□□ 0.31
PTPN18-213ENST00000489215 DAZ2Q13117 558 aaKnown RBP16.97■□□□□ 0.31
PTPN18-213ENST00000489215 ANXA2RQ3ZCQ2 193 aa16.97■□□□□ 0.31
PTPN18-213ENST00000489215 EIF4E3Q8N5X7 224 aaKnown RBP16.97■□□□□ 0.31
PTPN18-213ENST00000489215 RNF222A6NCQ9 220 aa16.96■□□□□ 0.31
PTPN18-213ENST00000489215 STAG3L2P0CL84 134 aa16.96■□□□□ 0.31
PTPN18-213ENST00000489215 STAG3L3P0CL85 134 aa16.96■□□□□ 0.31
PTPN18-213ENST00000489215 CD300CQ08708 224 aa16.96■□□□□ 0.31
PTPN18-213ENST00000489215 BTN1A1Q13410 526 aa16.96■□□□□ 0.31
PTPN18-213ENST00000489215 TMEM88Q6PEY1 159 aa16.96■□□□□ 0.31
PTPN18-213ENST00000489215 ZFAND2AQ8N6M9 145 aa16.96■□□□□ 0.31
PTPN18-213ENST00000489215 ACTR3CQ9C0K3 210 aaPredicted RBP16.96■□□□□ 0.31
PTPN18-213ENST00000489215 F5H768 121 aa16.95■□□□□ 0.3
PTPN18-213ENST00000489215 RGS13O14921 159 aa16.95■□□□□ 0.3
PTPN18-213ENST00000489215 RNF212Q495C1 297 aa16.95■□□□□ 0.3
PTPN18-213ENST00000489215 RAB24Q969Q5 203 aa16.95■□□□□ 0.3
PTPN18-213ENST00000489215 HYLS1Q96M11 299 aa16.95■□□□□ 0.3
PTPN18-213ENST00000489215 HYDINQ4G0P3 5121 aa16.95■□□□□ 0.3
PTPN18-213ENST00000489215 LINC00612Q8N6U2 182 aa16.94■□□□□ 0.3
PTPN18-213ENST00000489215 SERTM2A0A1B0GWG4 89 aa16.93■□□□□ 0.3
PTPN18-213ENST00000489215 CXorf1O96002 111 aa16.93■□□□□ 0.3
PTPN18-213ENST00000489215 ARL14EPLP0DKL9 152 aa16.93■□□□□ 0.3
PTPN18-213ENST00000489215 IBA57Q5T440 356 aaKnown RBP16.93■□□□□ 0.3
PTPN18-213ENST00000489215 RPL7L1Q6DKI1 246 aaKnown RBP16.93■□□□□ 0.3
PTPN18-213ENST00000489215 UBE2DNLQ8IWF7 75 aa16.93■□□□□ 0.3
PTPN18-213ENST00000489215 TMEM167BQ9NRX6 74 aa16.93■□□□□ 0.3
PTPN18-213ENST00000489215 HMGB3O15347 200 aaKnown RBP16.92■□□□□ 0.3
PTPN18-213ENST00000489215 ST6GAL2Q96JF0 529 aa16.92■□□□□ 0.3
PTPN18-213ENST00000489215 IGHV1OR15-1A0A075B7D0 117 aa16.91■□□□□ 0.3
PTPN18-213ENST00000489215 Q8TAT8 98 aa16.91■□□□□ 0.3
PTPN18-213ENST00000489215 SUN5Q8TC36 379 aa16.91■□□□□ 0.3
PTPN18-213ENST00000489215 ARPC5LQ9BPX5 153 aa16.91■□□□□ 0.3
PTPN18-213ENST00000489215 K7EQM0 130 aa16.9■□□□□ 0.3
PTPN18-213ENST00000489215 ARPC5O15511 151 aa16.9■□□□□ 0.3
PTPN18-213ENST00000489215 EIF3GO75821 320 aaKnown RBP eCLIP16.9■□□□□ 0.3
PTPN18-213ENST00000489215 GCHFRP30047 84 aa16.9■□□□□ 0.3
PTPN18-213ENST00000489215 FAM3BP58499 235 aaPredicted RBP16.9■□□□□ 0.3
PTPN18-213ENST00000489215 SH3BGRL3Q9H299 93 aa16.9■□□□□ 0.3
PTPN18-213ENST00000489215 GAGE12BA1L429 117 aa16.89■□□□□ 0.29
PTPN18-213ENST00000489215 GAGE7O76087 117 aa16.89■□□□□ 0.29
PTPN18-213ENST00000489215 GAGE12FP0CL80 117 aa16.89■□□□□ 0.29
PTPN18-213ENST00000489215 GAGE12GP0CL81 117 aa16.89■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 62.1 ms