RNA–Protein interactions for RNA: ENST00000487711.5

TTC3-220, Transcript of tetratricopeptide repeat domain 3, humanhuman

TSL 5

Gene TTC3, Length 925 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC3-220ENST00000487711 GNPNAT1Q96EK6 184 aaPredicted RBP1.72□□□□□ -2.13
TTC3-220ENST00000487711 ADAT3Q96EY9 351 aaPredicted RBP1.72□□□□□ -2.13
TTC3-220ENST00000487711 BTF3L4Q96K17 158 aa1.72□□□□□ -2.13
TTC3-220ENST00000487711 LINC00052Q96N35 136 aa1.72□□□□□ -2.13
TTC3-220ENST00000487711 GINS3Q9BRX5 216 aa1.72□□□□□ -2.13
TTC3-220ENST00000487711 PBDC1Q9BVG4 233 aa1.72□□□□□ -2.13
TTC3-220ENST00000487711 ZNF471Q9BX82 626 aaPredicted RBP1.72□□□□□ -2.13
TTC3-220ENST00000487711 OR51I2Q9H344 312 aa1.72□□□□□ -2.13
TTC3-220ENST00000487711 ZNF286AQ9HBT8 521 aa1.72□□□□□ -2.13
TTC3-220ENST00000487711 GPR84Q9NQS5 396 aa1.72□□□□□ -2.13
TTC3-220ENST00000487711 UQCC1Q9NVA1 299 aa1.72□□□□□ -2.13
TTC3-220ENST00000487711 TMEM242Q9NWH2 141 aa1.72□□□□□ -2.13
TTC3-220ENST00000487711 COA4Q9NYJ1 87 aa1.72□□□□□ -2.13
TTC3-220ENST00000487711 LSM5Q9Y4Y9 91 aaKnown RBP1.72□□□□□ -2.13
TTC3-220ENST00000487711 CHCHD2Q9Y6H1 151 aaPredicted RBP1.72□□□□□ -2.13
TTC3-220ENST00000487711 TMEM56-RWDD3S4R434 201 aa1.72□□□□□ -2.13
TTC3-220ENST00000487711 CDH23Q9H251 3354 aa1.72□□□□□ -2.13
TTC3-220ENST00000487711 PI4KAP42356 2102 aa1.72□□□□□ -2.13
TTC3-220ENST00000487711 LAMA3Q16787 3333 aa1.71□□□□□ -2.14
TTC3-220ENST00000487711 ASXL3Q9C0F0 2248 aa1.71□□□□□ -2.14
TTC3-220ENST00000487711 ALPK2Q86TB3 2170 aa1.71□□□□□ -2.14
TTC3-220ENST00000487711 OTOGLQ3ZCN5 2332 aa1.71□□□□□ -2.14
TTC3-220ENST00000487711 TRAV8-1A0A0A6YYK1 113 aa1.71□□□□□ -2.14
TTC3-220ENST00000487711 IGHV3-21A0A0B4J1V1 117 aa1.71□□□□□ -2.14
TTC3-220ENST00000487711 IGKV1-9A0A0C4DH69 117 aa1.71□□□□□ -2.14
TTC3-220ENST00000487711 A6NIN4 97 aa1.71□□□□□ -2.14
TTC3-220ENST00000487711 IGLL5B9A064 214 aa1.71□□□□□ -2.14
TTC3-220ENST00000487711 H7C1C5 153 aa1.71□□□□□ -2.14
TTC3-220ENST00000487711 PITX3O75364 302 aa1.71□□□□□ -2.14
TTC3-220ENST00000487711 NAPSAO96009 420 aa1.71□□□□□ -2.14
TTC3-220ENST00000487711 IGHG2P01859 326 aa1.71□□□□□ -2.14
TTC3-220ENST00000487711 APOC3P02656 99 aa1.71□□□□□ -2.14
TTC3-220ENST00000487711 MT-ND4LP03901 98 aa1.71□□□□□ -2.14
TTC3-220ENST00000487711 SERPINA7P05543 415 aa1.71□□□□□ -2.14
TTC3-220ENST00000487711 COX6A1P12074 109 aa1.71□□□□□ -2.14
TTC3-220ENST00000487711 TAS2R30P59541 319 aa1.71□□□□□ -2.14
TTC3-220ENST00000487711 SUPT4H1P63272 117 aaKnown RBP1.71□□□□□ -2.14
TTC3-220ENST00000487711 SERF2P84101 59 aa1.71□□□□□ -2.14
TTC3-220ENST00000487711 DEFA6Q01524 100 aa1.71□□□□□ -2.14
TTC3-220ENST00000487711 ENDOGQ14249 297 aaKnown RBP1.71□□□□□ -2.14
TTC3-220ENST00000487711 PEA15Q15121 130 aa1.71□□□□□ -2.14
TTC3-220ENST00000487711 DEFB133Q30KQ1 61 aa1.71□□□□□ -2.14
TTC3-220ENST00000487711 SCGB2B2Q4G0G5 96 aa1.71□□□□□ -2.14
TTC3-220ENST00000487711 TMEM97Q5BJF2 176 aa1.71□□□□□ -2.14
TTC3-220ENST00000487711 HAGHLQ6PII5 290 aaPredicted RBP1.71□□□□□ -2.14
TTC3-220ENST00000487711 Q6ZS52 159 aa1.71□□□□□ -2.14
TTC3-220ENST00000487711 SSX8Q7RTT4 187 aa1.71□□□□□ -2.14
TTC3-220ENST00000487711 C3orf22Q8N5N4 141 aa1.71□□□□□ -2.14
TTC3-220ENST00000487711 DEFB125Q8N687 156 aa1.71□□□□□ -2.14
TTC3-220ENST00000487711 ZNF283Q8N7M2 679 aa1.71□□□□□ -2.14
TTC3-220ENST00000487711 LY6G5BQ8NDX9 201 aa1.71□□□□□ -2.14
TTC3-220ENST00000487711 OR1L8Q8NGR8 309 aa1.71□□□□□ -2.14
TTC3-220ENST00000487711 LSM10Q969L4 123 aaKnown RBP1.71□□□□□ -2.14
TTC3-220ENST00000487711 CMBLQ96DG6 245 aa1.71□□□□□ -2.14
TTC3-220ENST00000487711 BORCS8Q96FH0 119 aa1.71□□□□□ -2.14
TTC3-220ENST00000487711 ARHGAP5-AS1Q96IT6 56 aa1.71□□□□□ -2.14
TTC3-220ENST00000487711 GPER1Q99527 375 aa1.71□□□□□ -2.14
TTC3-220ENST00000487711 TXNDC17Q9BRA2 123 aa1.71□□□□□ -2.14
TTC3-220ENST00000487711 PSMG3Q9BT73 122 aaPredicted RBP1.71□□□□□ -2.14
TTC3-220ENST00000487711 PECRQ9BY49 303 aa1.71□□□□□ -2.14
TTC3-220ENST00000487711 TTTY10Q9BZA0 68 aa1.71□□□□□ -2.14
TTC3-220ENST00000487711 TMEM222Q9H0R3 208 aa1.71□□□□□ -2.14
TTC3-220ENST00000487711 PRO3102Q9H379 93 aa1.71□□□□□ -2.14
TTC3-220ENST00000487711 NAA60Q9H7X0 242 aa1.71□□□□□ -2.14
TTC3-220ENST00000487711 TAF9BQ9HBM6 251 aa1.71□□□□□ -2.14
TTC3-220ENST00000487711 BIN3Q9NQY0 253 aa1.71□□□□□ -2.14
TTC3-220ENST00000487711 SMCO4Q9NRQ5 59 aa1.71□□□□□ -2.14
TTC3-220ENST00000487711 LYRM2Q9NU23 88 aaPredicted RBP1.71□□□□□ -2.14
TTC3-220ENST00000487711 ASF1BQ9NVP2 202 aa1.71□□□□□ -2.14
TTC3-220ENST00000487711 BOKQ9UMX3 212 aaPredicted RBP1.71□□□□□ -2.14
TTC3-220ENST00000487711 TIMM9Q9Y5J7 89 aa1.71□□□□□ -2.14
TTC3-220ENST00000487711 MPC1Q9Y5U8 109 aa1.71□□□□□ -2.14
TTC3-220ENST00000487711 R4GN34 69 aa1.71□□□□□ -2.14
TTC3-220ENST00000487711 NCOR1O75376 2440 aa1.71□□□□□ -2.14
TTC3-220ENST00000487711 BDP1A6H8Y1 2624 aa1.7□□□□□ -2.14
TTC3-220ENST00000487711 C5orf42Q9H799 3197 aa1.7□□□□□ -2.14
TTC3-220ENST00000487711 REV3LO60673 3130 aa1.7□□□□□ -2.14
TTC3-220ENST00000487711 IGKV1D-43A0A0B4J1Z2 117 aa1.7□□□□□ -2.14
TTC3-220ENST00000487711 A0A0C4DFX4 3053 aa1.7□□□□□ -2.14
TTC3-220ENST00000487711 IGKV1-12A0A0C4DH73 117 aa1.7□□□□□ -2.14
TTC3-220ENST00000487711 TSTD3H0UI37 97 aa1.7□□□□□ -2.14
TTC3-220ENST00000487711 GPR31O00270 319 aa1.7□□□□□ -2.14
TTC3-220ENST00000487711 KLF7O75840 302 aaPredicted RBP1.7□□□□□ -2.14
TTC3-220ENST00000487711 OR2J2O76002 312 aa1.7□□□□□ -2.14
TTC3-220ENST00000487711 PPYP01298 95 aa1.7□□□□□ -2.14
TTC3-220ENST00000487711 IFNA1P01562 189 aa1.7□□□□□ -2.14
TTC3-220ENST00000487711 IGKV1D-12P01611 117 aa1.7□□□□□ -2.14
TTC3-220ENST00000487711 ZNF728P0DKX0 622 aa1.7□□□□□ -2.14
TTC3-220ENST00000487711 BLVRBP30043 206 aaPredicted RBP1.7□□□□□ -2.14
TTC3-220ENST00000487711 SNCAP37840 140 aa1.7□□□□□ -2.14
TTC3-220ENST00000487711 RBM11P57052 281 aaKnown RBP1.7□□□□□ -2.14
TTC3-220ENST00000487711 TMEM33P57088 247 aa1.7□□□□□ -2.14
TTC3-220ENST00000487711 FGF12P61328 243 aa1.7□□□□□ -2.14
TTC3-220ENST00000487711 HERVK_113P63121 156 aa1.7□□□□□ -2.14
TTC3-220ENST00000487711 JOSD1Q15040 202 aaPredicted RBP1.7□□□□□ -2.14
TTC3-220ENST00000487711 BATFQ16520 125 aa1.7□□□□□ -2.14
TTC3-220ENST00000487711 IAH1Q2TAA2 248 aaPredicted RBP1.7□□□□□ -2.14
TTC3-220ENST00000487711 ACOT6Q3I5F7 207 aaPredicted RBP1.7□□□□□ -2.14
TTC3-220ENST00000487711 KHDC3LQ587J8 217 aa1.7□□□□□ -2.14
TTC3-220ENST00000487711 NMSQ5H8A3 153 aa1.7□□□□□ -2.14
Retrieved 100 of 20,778 RNA–protein pairs in 63.1 ms