RNA–Protein interactions for RNA: ENST00000487294.1

R3HDM1-218, Transcript of R3H domain containing 1, humanhuman

TSL 3

Gene R3HDM1, Length 587 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-218ENST00000487294 ODF3Q96PU9 254 aa3.44□□□□□ -1.86
R3HDM1-218ENST00000487294 CIB3Q96Q77 187 aaPredicted RBP3.44□□□□□ -1.86
R3HDM1-218ENST00000487294 PRRT1Q99946 306 aa3.44□□□□□ -1.86
R3HDM1-218ENST00000487294 TMEM70Q9BUB7 260 aa3.44□□□□□ -1.86
R3HDM1-218ENST00000487294 SLC25A39Q9BZJ4 359 aaPredicted RBP3.44□□□□□ -1.86
R3HDM1-218ENST00000487294 SLC25A22Q9H936 323 aa3.44□□□□□ -1.86
R3HDM1-218ENST00000487294 RNF24Q9Y225 148 aa3.44□□□□□ -1.86
R3HDM1-218ENST00000487294 DISC1C4P0D8 188 aa3.43□□□□□ -1.86
R3HDM1-218ENST00000487294 IFNA5P01569 189 aa3.43□□□□□ -1.86
R3HDM1-218ENST00000487294 C1QBP02746 253 aa3.43□□□□□ -1.86
R3HDM1-218ENST00000487294 RLN2P04090 185 aa3.43□□□□□ -1.86
R3HDM1-218ENST00000487294 AKAIN1P0CW23 69 aa3.43□□□□□ -1.86
R3HDM1-218ENST00000487294 ORM2P19652 201 aa3.43□□□□□ -1.86
R3HDM1-218ENST00000487294 NCS1P62166 190 aa3.43□□□□□ -1.86
R3HDM1-218ENST00000487294 LSM3P62310 102 aaKnown RBP3.43□□□□□ -1.86
R3HDM1-218ENST00000487294 SELENOTP62341 195 aa3.43□□□□□ -1.86
R3HDM1-218ENST00000487294 HIST1H1AQ02539 215 aaPredicted RBP3.43□□□□□ -1.86
R3HDM1-218ENST00000487294 PSG3Q16557 428 aa3.43□□□□□ -1.86
R3HDM1-218ENST00000487294 S100A7AQ86SG5 101 aa3.43□□□□□ -1.86
R3HDM1-218ENST00000487294 CCDC190Q86UF4 302 aa3.43□□□□□ -1.86
R3HDM1-218ENST00000487294 ZNF738Q8NE65 137 aa3.43□□□□□ -1.86
R3HDM1-218ENST00000487294 PYGO2Q9BRQ0 406 aa3.43□□□□□ -1.86
R3HDM1-218ENST00000487294 LINC00467Q9BRT7 94 aa3.43□□□□□ -1.86
R3HDM1-218ENST00000487294 SLC50A1Q9BRV3 221 aa3.43□□□□□ -1.86
R3HDM1-218ENST00000487294 TMEM147Q9BVK8 224 aa3.43□□□□□ -1.86
R3HDM1-218ENST00000487294 FUNDC2Q9BWH2 189 aa3.43□□□□□ -1.86
R3HDM1-218ENST00000487294 VCX3AQ9NNX9 186 aa3.43□□□□□ -1.86
R3HDM1-218ENST00000487294 ZNF331Q9NQX6 463 aaPredicted RBP3.43□□□□□ -1.86
R3HDM1-218ENST00000487294 RABL2AQ9UBK7 228 aaPredicted RBP3.43□□□□□ -1.86
R3HDM1-218ENST00000487294 EXTL2Q9UBQ6 330 aa3.43□□□□□ -1.86
R3HDM1-218ENST00000487294 RABL2BQ9UNT1 228 aa3.43□□□□□ -1.86
R3HDM1-218ENST00000487294 TRAV9-2A0A087WT02 112 aa3.42□□□□□ -1.86
R3HDM1-218ENST00000487294 A0A087WXM4 84 aa3.42□□□□□ -1.86
R3HDM1-218ENST00000487294 A0A0J9YY99 117 aa3.42□□□□□ -1.86
R3HDM1-218ENST00000487294 ANKRD20A5PA0PJZ0 165 aa3.42□□□□□ -1.86
R3HDM1-218ENST00000487294 SNURFLB1AK76 121 aa3.42□□□□□ -1.86
R3HDM1-218ENST00000487294 FAM25AB3EWG3 89 aa3.42□□□□□ -1.86
R3HDM1-218ENST00000487294 FAM25CB3EWG5 89 aa3.42□□□□□ -1.86
R3HDM1-218ENST00000487294 FAM25GB3EWG6 89 aa3.42□□□□□ -1.86
R3HDM1-218ENST00000487294 FNDC10F2Z333 226 aa3.42□□□□□ -1.86
R3HDM1-218ENST00000487294 HYPMO75409 117 aa3.42□□□□□ -1.86
R3HDM1-218ENST00000487294 ZNF324O75467 553 aaPredicted RBP3.42□□□□□ -1.86
R3HDM1-218ENST00000487294 MED6O75586 246 aa3.42□□□□□ -1.86
R3HDM1-218ENST00000487294 NXPH4O95158 308 aa3.42□□□□□ -1.86
R3HDM1-218ENST00000487294 ANXA3P12429 323 aa3.42□□□□□ -1.86
R3HDM1-218ENST00000487294 GATA2P23769 480 aaPredicted RBP3.42□□□□□ -1.86
R3HDM1-218ENST00000487294 VBP1P61758 197 aa3.42□□□□□ -1.86
R3HDM1-218ENST00000487294 RHOBP62745 196 aa3.42□□□□□ -1.86
R3HDM1-218ENST00000487294 DLK1P80370 383 aa3.42□□□□□ -1.86
R3HDM1-218ENST00000487294 TMEM128Q5BJH2 165 aa3.42□□□□□ -1.86
R3HDM1-218ENST00000487294 FAAP20Q6NZ36 180 aa3.42□□□□□ -1.86
R3HDM1-218ENST00000487294 LCN15Q6UWW0 184 aa3.42□□□□□ -1.86
R3HDM1-218ENST00000487294 C11orf72Q8NBR9 251 aa3.42□□□□□ -1.86
R3HDM1-218ENST00000487294 OR51S1Q8NGJ8 323 aa3.42□□□□□ -1.86
R3HDM1-218ENST00000487294 RPUSD4Q96CM3 377 aaKnown RBP3.42□□□□□ -1.86
R3HDM1-218ENST00000487294 MIXL1Q9H2W2 232 aa3.42□□□□□ -1.86
R3HDM1-218ENST00000487294 SCP2D1Q9UJQ7 156 aa3.42□□□□□ -1.86
R3HDM1-218ENST00000487294 HIGD1AQ9Y241 93 aa3.42□□□□□ -1.86
R3HDM1-218ENST00000487294 PMS2P5A8MQ11 134 aa3.41□□□□□ -1.86
R3HDM1-218ENST00000487294 SYNGR2O43760 224 aa3.41□□□□□ -1.86
R3HDM1-218ENST00000487294 SPINK4O60575 86 aa3.41□□□□□ -1.86
R3HDM1-218ENST00000487294 ATP6V1G2O95670 118 aa3.41□□□□□ -1.86
R3HDM1-218ENST00000487294 SMR3BP02814 79 aaPredicted RBP3.41□□□□□ -1.86
R3HDM1-218ENST00000487294 IL5P05113 134 aa3.41□□□□□ -1.86
R3HDM1-218ENST00000487294 LINC00869P0C866 280 aa3.41□□□□□ -1.86
R3HDM1-218ENST00000487294 DNAH10OSP0CZ25 163 aa3.41□□□□□ -1.86
R3HDM1-218ENST00000487294 HTN1P15515 57 aa3.41□□□□□ -1.86
R3HDM1-218ENST00000487294 POLR2GP62487 172 aaKnown RBP eCLIP3.41□□□□□ -1.86
R3HDM1-218ENST00000487294 FGL1Q08830 312 aa3.41□□□□□ -1.86
R3HDM1-218ENST00000487294 SLAQ13239 276 aa3.41□□□□□ -1.86
R3HDM1-218ENST00000487294 IBA57Q5T440 356 aaKnown RBP3.41□□□□□ -1.86
R3HDM1-218ENST00000487294 LYPD5Q6UWN5 251 aa3.41□□□□□ -1.86
R3HDM1-218ENST00000487294 PATE2Q6UY27 113 aa3.41□□□□□ -1.86
R3HDM1-218ENST00000487294 CYP2G1PQ6ZSU1 146 aa3.41□□□□□ -1.86
R3HDM1-218ENST00000487294 Q6ZTI0 123 aa3.41□□□□□ -1.86
R3HDM1-218ENST00000487294 TMED4Q7Z7H5 227 aa3.41□□□□□ -1.86
R3HDM1-218ENST00000487294 CLVS1Q8IUQ0 354 aaPredicted RBP3.41□□□□□ -1.86
R3HDM1-218ENST00000487294 IQCF2Q8IXL9 164 aa3.41□□□□□ -1.86
R3HDM1-218ENST00000487294 ZNF680Q8NEM1 530 aa3.41□□□□□ -1.86
R3HDM1-218ENST00000487294 ZNF431Q8TF32 576 aaPredicted RBP3.41□□□□□ -1.86
R3HDM1-218ENST00000487294 SAT2Q96F10 170 aaPredicted RBP3.41□□□□□ -1.86
R3HDM1-218ENST00000487294 ST6GAL2Q96JF0 529 aa3.41□□□□□ -1.86
R3HDM1-218ENST00000487294 KRTAP4-4Q9BYR3 166 aa3.41□□□□□ -1.86
R3HDM1-218ENST00000487294 PRO0255Q9UI72 69 aa3.41□□□□□ -1.86
R3HDM1-218ENST00000487294 ICOSQ9Y6W8 199 aa3.41□□□□□ -1.86
R3HDM1-218ENST00000487294 TRGV2A0A075B6R0 118 aa3.4□□□□□ -1.87
R3HDM1-218ENST00000487294 LRCOL1A6NCL2 159 aa3.4□□□□□ -1.87
R3HDM1-218ENST00000487294 KLLNB2CW77 178 aa3.4□□□□□ -1.87
R3HDM1-218ENST00000487294 PAGE4O60829 102 aa3.4□□□□□ -1.87
R3HDM1-218ENST00000487294 ZNF253O75346 499 aa3.4□□□□□ -1.87
R3HDM1-218ENST00000487294 SLC25A5P05141 298 aaKnown RBP3.4□□□□□ -1.87
R3HDM1-218ENST00000487294 NMBP08949 121 aa3.4□□□□□ -1.87
R3HDM1-218ENST00000487294 CT45A10P0DMU9 189 aa3.4□□□□□ -1.87
R3HDM1-218ENST00000487294 IGLC2P0DOY2 106 aa3.4□□□□□ -1.87
R3HDM1-218ENST00000487294 IAPPP10997 89 aa3.4□□□□□ -1.87
R3HDM1-218ENST00000487294 KRTAP5-9P26371 169 aa3.4□□□□□ -1.87
R3HDM1-218ENST00000487294 FUSP35637 526 aaKnown RBP eCLIP3.4□□□□□ -1.87
R3HDM1-218ENST00000487294 CRYBA4P53673 196 aa3.4□□□□□ -1.87
R3HDM1-218ENST00000487294 TCL1AP56279 114 aa3.4□□□□□ -1.87
R3HDM1-218ENST00000487294 AKR1C1Q04828 323 aa3.4□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 74.7 ms