RNA–Protein interactions for RNA: ENST00000485820.1

YIF1A-208, Transcript of Yip1 interacting factor homolog A, membrane trafficking protein, humanhuman

TSL 2

Gene YIF1A, Length 653 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YIF1A-208ENST00000485820 RNF222A6NCQ9 220 aa10.59□□□□□ -0.71
YIF1A-208ENST00000485820 G3V3Q6 166 aa10.59□□□□□ -0.71
YIF1A-208ENST00000485820 ZNF324O75467 553 aaPredicted RBP10.59□□□□□ -0.71
YIF1A-208ENST00000485820 DEFB130BP0DP73 79 aa10.59□□□□□ -0.71
YIF1A-208ENST00000485820 DEFB130AP0DP74 79 aa10.59□□□□□ -0.71
YIF1A-208ENST00000485820 HTN3P15516 51 aa10.59□□□□□ -0.71
YIF1A-208ENST00000485820 CRISP2P16562 243 aa10.59□□□□□ -0.71
YIF1A-208ENST00000485820 RAB2AP61019 212 aa10.59□□□□□ -0.71
YIF1A-208ENST00000485820 CD300CQ08708 224 aa10.59□□□□□ -0.71
YIF1A-208ENST00000485820 KHDC3LQ587J8 217 aa10.59□□□□□ -0.71
YIF1A-208ENST00000485820 TMEM263Q8WUH6 116 aaKnown RBP10.59□□□□□ -0.71
YIF1A-208ENST00000485820 Q9H3A6 140 aa10.59□□□□□ -0.71
YIF1A-208ENST00000485820 TIMM8BQ9Y5J9 83 aaPredicted RBP10.59□□□□□ -0.71
YIF1A-208ENST00000485820 A0A1W2PPV4 95 aa10.58□□□□□ -0.72
YIF1A-208ENST00000485820 C7orf71A4D174 169 aa10.58□□□□□ -0.72
YIF1A-208ENST00000485820 NMBP08949 121 aa10.58□□□□□ -0.72
YIF1A-208ENST00000485820 ATP6V0CP27449 155 aa10.58□□□□□ -0.72
YIF1A-208ENST00000485820 UBE2L3P68036 154 aaKnown RBP10.58□□□□□ -0.72
YIF1A-208ENST00000485820 ZFAND2AQ8N6M9 145 aa10.58□□□□□ -0.72
YIF1A-208ENST00000485820 HSD17B11Q8NBQ5 300 aa10.58□□□□□ -0.72
YIF1A-208ENST00000485820 OR10G4Q8NGN3 311 aa10.58□□□□□ -0.72
YIF1A-208ENST00000485820 OR10G9Q8NGN4 311 aa10.58□□□□□ -0.72
YIF1A-208ENST00000485820 OR10G7Q8NGN6 311 aa10.58□□□□□ -0.72
YIF1A-208ENST00000485820 OR2G3Q8NGZ4 309 aa10.58□□□□□ -0.72
YIF1A-208ENST00000485820 PYGO2Q9BRQ0 406 aa10.58□□□□□ -0.72
YIF1A-208ENST00000485820 PSMG3Q9BT73 122 aaPredicted RBP10.58□□□□□ -0.72
YIF1A-208ENST00000485820 NOP10Q9NPE3 64 aaKnown RBP10.58□□□□□ -0.72
YIF1A-208ENST00000485820 ZNF492Q9P255 531 aa10.58□□□□□ -0.72
YIF1A-208ENST00000485820 TNFSF18Q9UNG2 199 aa10.58□□□□□ -0.72
YIF1A-208ENST00000485820 CBY3A6NI87 242 aa10.57□□□□□ -0.72
YIF1A-208ENST00000485820 TMEM78Q5T7P6 136 aa10.57□□□□□ -0.72
YIF1A-208ENST00000485820 PQLC2Q6ZP29 291 aa10.57□□□□□ -0.72
YIF1A-208ENST00000485820 CCDC28AQ8IWP9 274 aa10.57□□□□□ -0.72
YIF1A-208ENST00000485820 INO80EQ8NBZ0 244 aaPredicted RBP10.57□□□□□ -0.72
YIF1A-208ENST00000485820 OR2T35Q8NGX2 323 aa10.57□□□□□ -0.72
YIF1A-208ENST00000485820 RBAKDNA6NC62 111 aa10.56□□□□□ -0.72
YIF1A-208ENST00000485820 DIRC3C9JPN6 131 aa10.56□□□□□ -0.72
YIF1A-208ENST00000485820 HMGB3O15347 200 aaKnown RBP10.56□□□□□ -0.72
YIF1A-208ENST00000485820 GPX1P07203 203 aa10.56□□□□□ -0.72
YIF1A-208ENST00000485820 RNASE4P34096 147 aaKnown RBP10.56□□□□□ -0.72
YIF1A-208ENST00000485820 CSN1S1P47710 185 aa10.56□□□□□ -0.72
YIF1A-208ENST00000485820 SERF2P84101 59 aa10.56□□□□□ -0.72
YIF1A-208ENST00000485820 BTN1A1Q13410 526 aa10.56□□□□□ -0.72
YIF1A-208ENST00000485820 LINC00612Q8N6U2 182 aa10.56□□□□□ -0.72
YIF1A-208ENST00000485820 LINC00467Q9BRT7 94 aa10.56□□□□□ -0.72
YIF1A-208ENST00000485820 EPPK1P58107 5090 aaKnown RBP10.56□□□□□ -0.72
YIF1A-208ENST00000485820 FXYD6-FXYD2A0A087WZ82 144 aa10.55□□□□□ -0.72
YIF1A-208ENST00000485820 TRBV7-9A0A0J9YWB2 115 aa10.55□□□□□ -0.72
YIF1A-208ENST00000485820 PGPA6NDG6 321 aa10.55□□□□□ -0.72
YIF1A-208ENST00000485820 P0DMU3 169 aa10.55□□□□□ -0.72
YIF1A-208ENST00000485820 FAM231AP0DMU4 169 aa10.55□□□□□ -0.72
YIF1A-208ENST00000485820 FAM231CP0DMU5 169 aa10.55□□□□□ -0.72
YIF1A-208ENST00000485820 ZNF138P52744 262 aa10.55□□□□□ -0.72
YIF1A-208ENST00000485820 PRR9Q5T870 116 aa10.55□□□□□ -0.72
YIF1A-208ENST00000485820 RPL7L1Q6DKI1 246 aaKnown RBP10.55□□□□□ -0.72
YIF1A-208ENST00000485820 TMEM88Q6PEY1 159 aa10.55□□□□□ -0.72
YIF1A-208ENST00000485820 Q6ZQT7 251 aa10.55□□□□□ -0.72
YIF1A-208ENST00000485820 RXFP4Q8TDU9 374 aa10.55□□□□□ -0.72
YIF1A-208ENST00000485820 SH3BGRL3Q9H299 93 aa10.55□□□□□ -0.72
YIF1A-208ENST00000485820 OTORQ9NRC9 128 aa10.55□□□□□ -0.72
YIF1A-208ENST00000485820 STAG3L2P0CL84 134 aa10.54□□□□□ -0.72
YIF1A-208ENST00000485820 STAG3L3P0CL85 134 aa10.54□□□□□ -0.72
YIF1A-208ENST00000485820 POM121L12Q8N7R1 296 aa10.54□□□□□ -0.72
YIF1A-208ENST00000485820 C11orf72Q8NBR9 251 aa10.54□□□□□ -0.72
YIF1A-208ENST00000485820 Q8TAT8 98 aa10.54□□□□□ -0.72
YIF1A-208ENST00000485820 SUN5Q8TC36 379 aa10.54□□□□□ -0.72
YIF1A-208ENST00000485820 RAB24Q969Q5 203 aa10.54□□□□□ -0.72
YIF1A-208ENST00000485820 F5H768 121 aa10.53□□□□□ -0.72
YIF1A-208ENST00000485820 MBP02144 154 aa10.53□□□□□ -0.72
YIF1A-208ENST00000485820 ATP5G1P05496 136 aa10.53□□□□□ -0.72
YIF1A-208ENST00000485820 ARL14EPLP0DKL9 152 aa10.53□□□□□ -0.72
YIF1A-208ENST00000485820 ATP5G3P48201 142 aa10.53□□□□□ -0.72
YIF1A-208ENST00000485820 CDC34P49427 236 aaPredicted RBP10.53□□□□□ -0.72
YIF1A-208ENST00000485820 DAZ2Q13117 558 aaKnown RBP10.53□□□□□ -0.72
YIF1A-208ENST00000485820 ANXA2RQ3ZCQ2 193 aa10.53□□□□□ -0.72
YIF1A-208ENST00000485820 ARL6IP6Q8N6S5 226 aa10.53□□□□□ -0.72
YIF1A-208ENST00000485820 HYLS1Q96M11 299 aa10.53□□□□□ -0.72
YIF1A-208ENST00000485820 GSN-AS1Q9NRJ2 163 aa10.53□□□□□ -0.72
YIF1A-208ENST00000485820 DNAH6Q9C0G6 4158 aa10.53□□□□□ -0.72
YIF1A-208ENST00000485820 SNURFLB1AK76 121 aa10.52□□□□□ -0.73
YIF1A-208ENST00000485820 EIF4E3Q8N5X7 224 aaKnown RBP10.52□□□□□ -0.73
YIF1A-208ENST00000485820 GNPNAT1Q96EK6 184 aaPredicted RBP10.52□□□□□ -0.73
YIF1A-208ENST00000485820 LENEPQ9Y5L5 61 aa10.52□□□□□ -0.73
YIF1A-208ENST00000485820 NACAE9PAV3 2078 aa10.51□□□□□ -0.73
YIF1A-208ENST00000485820 BORCS7-ASMTA0A0B4J1R7 106 aa10.51□□□□□ -0.73
YIF1A-208ENST00000485820 GAGE12BA1L429 117 aa10.51□□□□□ -0.73
YIF1A-208ENST00000485820 GAGE7O76087 117 aa10.51□□□□□ -0.73
YIF1A-208ENST00000485820 GAGE12FP0CL80 117 aa10.51□□□□□ -0.73
YIF1A-208ENST00000485820 GAGE12GP0CL81 117 aa10.51□□□□□ -0.73
YIF1A-208ENST00000485820 GAGE12IP0CL82 117 aa10.51□□□□□ -0.73
YIF1A-208ENST00000485820 GCHFRP30047 84 aa10.51□□□□□ -0.73
YIF1A-208ENST00000485820 FAM74A1Q5RGS3 127 aa10.51□□□□□ -0.73
YIF1A-208ENST00000485820 CMTM2Q8TAZ6 248 aa10.51□□□□□ -0.73
YIF1A-208ENST00000485820 TMED6Q8WW62 240 aa10.51□□□□□ -0.73
YIF1A-208ENST00000485820 ACTR3CQ9C0K3 210 aaPredicted RBP10.51□□□□□ -0.73
YIF1A-208ENST00000485820 CYTL1Q9NRR1 136 aa10.51□□□□□ -0.73
YIF1A-208ENST00000485820 TP53TG3Q9ULZ0 132 aa10.51□□□□□ -0.73
YIF1A-208ENST00000485820 SMLR1H3BR10 107 aa10.5□□□□□ -0.73
YIF1A-208ENST00000485820 TAAR5O14804 337 aa10.5□□□□□ -0.73
YIF1A-208ENST00000485820 ARPC5O15511 151 aa10.5□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 98.2 ms