RNA–Protein interactions for RNA: ENST00000484305.1

HDAC1-209, Transcript of histone deacetylase 1, humanhuman

TSL 5

Gene HDAC1, Length 561 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-209ENST00000484305 C9orf47Q6ZRZ4 202 aa9.11□□□□□ -0.95
HDAC1-209ENST00000484305 NOP10Q9NPE3 64 aaKnown RBP9.11□□□□□ -0.95
HDAC1-209ENST00000484305 TIMM8BQ9Y5J9 83 aaPredicted RBP9.11□□□□□ -0.95
HDAC1-209ENST00000484305 BIRC6Q9NR09 4857 aa9.1□□□□□ -0.95
HDAC1-209ENST00000484305 KLLNB2CW77 178 aa9.1□□□□□ -0.95
HDAC1-209ENST00000484305 SLC25A5P05141 298 aaKnown RBP9.1□□□□□ -0.95
HDAC1-209ENST00000484305 RANP62826 216 aaKnown RBP9.1□□□□□ -0.95
HDAC1-209ENST00000484305 UBE2L3P68036 154 aaKnown RBP9.1□□□□□ -0.95
HDAC1-209ENST00000484305 CD300CQ08708 224 aa9.1□□□□□ -0.95
HDAC1-209ENST00000484305 KHDC3LQ587J8 217 aa9.1□□□□□ -0.95
HDAC1-209ENST00000484305 TMEM88Q6PEY1 159 aa9.1□□□□□ -0.95
HDAC1-209ENST00000484305 POM121L12Q8N7R1 296 aa9.1□□□□□ -0.95
HDAC1-209ENST00000484305 FRAS1Q86XX4 4008 aa9.09□□□□□ -0.95
HDAC1-209ENST00000484305 C7orf71A4D174 169 aa9.09□□□□□ -0.95
HDAC1-209ENST00000484305 CBY3A6NI87 242 aa9.09□□□□□ -0.95
HDAC1-209ENST00000484305 ZNF324O75467 553 aaPredicted RBP9.09□□□□□ -0.95
HDAC1-209ENST00000484305 GIPP09681 153 aaPredicted RBP9.09□□□□□ -0.95
HDAC1-209ENST00000484305 M6PRP20645 277 aa9.09□□□□□ -0.95
HDAC1-209ENST00000484305 RNASE4P34096 147 aaKnown RBP9.09□□□□□ -0.95
HDAC1-209ENST00000484305 TAS2R45P59539 299 aa9.09□□□□□ -0.95
HDAC1-209ENST00000484305 RAB2AP61019 212 aa9.09□□□□□ -0.95
HDAC1-209ENST00000484305 BTN1A1Q13410 526 aa9.09□□□□□ -0.95
HDAC1-209ENST00000484305 ACOT6Q3I5F7 207 aaPredicted RBP9.09□□□□□ -0.95
HDAC1-209ENST00000484305 CCDC28AQ8IWP9 274 aa9.09□□□□□ -0.95
HDAC1-209ENST00000484305 LYPD1Q8N2G4 141 aa9.09□□□□□ -0.95
HDAC1-209ENST00000484305 AQP10Q96PS8 301 aa9.09□□□□□ -0.95
HDAC1-209ENST00000484305 Q9H3A6 140 aa9.09□□□□□ -0.95
HDAC1-209ENST00000484305 F5H768 121 aa9.08□□□□□ -0.96
HDAC1-209ENST00000484305 ATP5G1P05496 136 aa9.08□□□□□ -0.96
HDAC1-209ENST00000484305 GPX1P07203 203 aa9.08□□□□□ -0.96
HDAC1-209ENST00000484305 CRISP2P16562 243 aa9.08□□□□□ -0.96
HDAC1-209ENST00000484305 ATP5G3P48201 142 aa9.08□□□□□ -0.96
HDAC1-209ENST00000484305 TMEM78Q5T7P6 136 aa9.08□□□□□ -0.96
HDAC1-209ENST00000484305 PRR9Q5T870 116 aa9.08□□□□□ -0.96
HDAC1-209ENST00000484305 Q6ZQT7 251 aa9.08□□□□□ -0.96
HDAC1-209ENST00000484305 ZFAND2AQ8N6M9 145 aa9.08□□□□□ -0.96
HDAC1-209ENST00000484305 HSD17B11Q8NBQ5 300 aa9.08□□□□□ -0.96
HDAC1-209ENST00000484305 PYGO2Q9BRQ0 406 aa9.08□□□□□ -0.96
HDAC1-209ENST00000484305 ZNF492Q9P255 531 aa9.08□□□□□ -0.96
HDAC1-209ENST00000484305 NACAE9PAV3 2078 aa9.08□□□□□ -0.96
HDAC1-209ENST00000484305 DNAH6Q9C0G6 4158 aa9.07□□□□□ -0.96
HDAC1-209ENST00000484305 A0A1W2PPV4 95 aa9.07□□□□□ -0.96
HDAC1-209ENST00000484305 HMGB3O15347 200 aaKnown RBP9.07□□□□□ -0.96
HDAC1-209ENST00000484305 CSN1S1P47710 185 aa9.07□□□□□ -0.96
HDAC1-209ENST00000484305 ZNF266Q14584 549 aa9.07□□□□□ -0.96
HDAC1-209ENST00000484305 RGS21Q2M5E4 152 aa9.07□□□□□ -0.96
HDAC1-209ENST00000484305 LINC00612Q8N6U2 182 aa9.07□□□□□ -0.96
HDAC1-209ENST00000484305 OR10G4Q8NGN3 311 aa9.07□□□□□ -0.96
HDAC1-209ENST00000484305 OR10G9Q8NGN4 311 aa9.07□□□□□ -0.96
HDAC1-209ENST00000484305 OR10G7Q8NGN6 311 aa9.07□□□□□ -0.96
HDAC1-209ENST00000484305 Q8TAT8 98 aa9.07□□□□□ -0.96
HDAC1-209ENST00000484305 ASB13Q8WXK3 278 aa9.07□□□□□ -0.96
HDAC1-209ENST00000484305 SNURFLB1AK76 121 aa9.06□□□□□ -0.96
HDAC1-209ENST00000484305 NMBP08949 121 aa9.06□□□□□ -0.96
HDAC1-209ENST00000484305 ZNF138P52744 262 aa9.06□□□□□ -0.96
HDAC1-209ENST00000484305 PQLC2Q6ZP29 291 aa9.06□□□□□ -0.96
HDAC1-209ENST00000484305 UBE2DNLQ8IWF7 75 aa9.06□□□□□ -0.96
HDAC1-209ENST00000484305 OR2G3Q8NGZ4 309 aa9.06□□□□□ -0.96
HDAC1-209ENST00000484305 HYLS1Q96M11 299 aa9.06□□□□□ -0.96
HDAC1-209ENST00000484305 LINC00467Q9BRT7 94 aa9.06□□□□□ -0.96
HDAC1-209ENST00000484305 GSN-AS1Q9NRJ2 163 aa9.06□□□□□ -0.96
HDAC1-209ENST00000484305 DNAH10Q8IVF4 4471 aa9.05□□□□□ -0.96
HDAC1-209ENST00000484305 FXYD6-FXYD2A0A087WZ82 144 aa9.05□□□□□ -0.96
HDAC1-209ENST00000484305 GAGE12BA1L429 117 aa9.05□□□□□ -0.96
HDAC1-209ENST00000484305 RBAKDNA6NC62 111 aa9.05□□□□□ -0.96
HDAC1-209ENST00000484305 RNF222A6NCQ9 220 aa9.05□□□□□ -0.96
HDAC1-209ENST00000484305 PGPA6NDG6 321 aa9.05□□□□□ -0.96
HDAC1-209ENST00000484305 DIRC3C9JPN6 131 aa9.05□□□□□ -0.96
HDAC1-209ENST00000484305 GAGE7O76087 117 aa9.05□□□□□ -0.96
HDAC1-209ENST00000484305 GAGE12FP0CL80 117 aa9.05□□□□□ -0.96
HDAC1-209ENST00000484305 GAGE12GP0CL81 117 aa9.05□□□□□ -0.96
HDAC1-209ENST00000484305 GAGE12IP0CL82 117 aa9.05□□□□□ -0.96
HDAC1-209ENST00000484305 ATP6V0CP27449 155 aa9.05□□□□□ -0.96
HDAC1-209ENST00000484305 EIF4E3Q8N5X7 224 aaKnown RBP9.05□□□□□ -0.96
HDAC1-209ENST00000484305 C15orf53Q8NAA6 179 aa9.05□□□□□ -0.96
HDAC1-209ENST00000484305 C11orf72Q8NBR9 251 aa9.05□□□□□ -0.96
HDAC1-209ENST00000484305 OR2T35Q8NGX2 323 aa9.05□□□□□ -0.96
HDAC1-209ENST00000484305 PSMG3Q9BT73 122 aaPredicted RBP9.05□□□□□ -0.96
HDAC1-209ENST00000484305 SH3BGRL3Q9H299 93 aa9.05□□□□□ -0.96
HDAC1-209ENST00000484305 OTORQ9NRC9 128 aa9.05□□□□□ -0.96
HDAC1-209ENST00000484305 ARL14EPLP0DKL9 152 aa9.04□□□□□ -0.96
HDAC1-209ENST00000484305 CDC34P49427 236 aaPredicted RBP9.04□□□□□ -0.96
HDAC1-209ENST00000484305 DAZ2Q13117 558 aaKnown RBP9.04□□□□□ -0.96
HDAC1-209ENST00000484305 ANXA2RQ3ZCQ2 193 aa9.04□□□□□ -0.96
HDAC1-209ENST00000484305 RNF212Q495C1 297 aa9.04□□□□□ -0.96
HDAC1-209ENST00000484305 Q6ZTI0 123 aa9.04□□□□□ -0.96
HDAC1-209ENST00000484305 INO80EQ8NBZ0 244 aaPredicted RBP9.04□□□□□ -0.96
HDAC1-209ENST00000484305 RXFP4Q8TDU9 374 aa9.04□□□□□ -0.96
HDAC1-209ENST00000484305 RAB24Q969Q5 203 aa9.04□□□□□ -0.96
HDAC1-209ENST00000484305 TP53TG3Q9ULZ0 132 aa9.04□□□□□ -0.96
HDAC1-209ENST00000484305 TNFSF18Q9UNG2 199 aa9.04□□□□□ -0.96
HDAC1-209ENST00000484305 IGHV1OR15-1A0A075B7D0 117 aa9.03□□□□□ -0.96
HDAC1-209ENST00000484305 TRBV7-9A0A0J9YWB2 115 aa9.03□□□□□ -0.96
HDAC1-209ENST00000484305 G3V3Q6 166 aa9.03□□□□□ -0.96
HDAC1-209ENST00000484305 M0R2N4 97 aa9.03□□□□□ -0.96
HDAC1-209ENST00000484305 RGS13O14921 159 aa9.03□□□□□ -0.96
HDAC1-209ENST00000484305 NUDT3O95989 172 aa9.03□□□□□ -0.96
HDAC1-209ENST00000484305 STAG3L2P0CL84 134 aa9.03□□□□□ -0.96
HDAC1-209ENST00000484305 STAG3L3P0CL85 134 aa9.03□□□□□ -0.96
HDAC1-209ENST00000484305 HOXA5P20719 270 aa9.03□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 57.1 ms