RNA–Protein interactions for RNA: ENST00000481644.1

HSPG2-210, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 2

Gene HSPG2, Length 839 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-210ENST00000481644 TMEM263Q8WUH6 116 aaKnown RBP13.3□□□□□ -0.28
HSPG2-210ENST00000481644 SLC25A5P05141 298 aaKnown RBP13.29□□□□□ -0.28
HSPG2-210ENST00000481644 DEFB130BP0DP73 79 aa13.29□□□□□ -0.28
HSPG2-210ENST00000481644 DEFB130AP0DP74 79 aa13.29□□□□□ -0.28
HSPG2-210ENST00000481644 CSN1S1P47710 185 aa13.29□□□□□ -0.28
HSPG2-210ENST00000481644 CCDC28AQ8IWP9 274 aa13.29□□□□□ -0.28
HSPG2-210ENST00000481644 LYPD1Q8N2G4 141 aa13.29□□□□□ -0.28
HSPG2-210ENST00000481644 OR10G4Q8NGN3 311 aa13.29□□□□□ -0.28
HSPG2-210ENST00000481644 OR10G9Q8NGN4 311 aa13.29□□□□□ -0.28
HSPG2-210ENST00000481644 OR10G7Q8NGN6 311 aa13.29□□□□□ -0.28
HSPG2-210ENST00000481644 OR2T35Q8NGX2 323 aa13.29□□□□□ -0.28
HSPG2-210ENST00000481644 RNASE8Q8TDE3 154 aaKnown RBP13.29□□□□□ -0.28
HSPG2-210ENST00000481644 VGLL1Q99990 258 aa13.29□□□□□ -0.28
HSPG2-210ENST00000481644 Q9H3A6 140 aa13.29□□□□□ -0.28
HSPG2-210ENST00000481644 TIMM8BQ9Y5J9 83 aaPredicted RBP13.29□□□□□ -0.28
HSPG2-210ENST00000481644 C7orf71A4D174 169 aa13.28□□□□□ -0.28
HSPG2-210ENST00000481644 PQLC2Q6ZP29 291 aa13.28□□□□□ -0.28
HSPG2-210ENST00000481644 FAM210BQ96KR6 192 aa13.28□□□□□ -0.28
HSPG2-210ENST00000481644 FAM19A4Q96LR4 140 aa13.28□□□□□ -0.28
HSPG2-210ENST00000481644 PSMG3Q9BT73 122 aaPredicted RBP13.28□□□□□ -0.28
HSPG2-210ENST00000481644 RNF222A6NCQ9 220 aa13.27□□□□□ -0.29
HSPG2-210ENST00000481644 KLLNB2CW77 178 aa13.27□□□□□ -0.29
HSPG2-210ENST00000481644 ATP6V0CP27449 155 aa13.27□□□□□ -0.29
HSPG2-210ENST00000481644 OR2G3Q8NGZ4 309 aa13.27□□□□□ -0.29
HSPG2-210ENST00000481644 PYGO2Q9BRQ0 406 aa13.27□□□□□ -0.29
HSPG2-210ENST00000481644 TNFSF18Q9UNG2 199 aa13.27□□□□□ -0.29
HSPG2-210ENST00000481644 GPX1P07203 203 aa13.26□□□□□ -0.29
HSPG2-210ENST00000481644 CRISP2P16562 243 aa13.26□□□□□ -0.29
HSPG2-210ENST00000481644 CDC34P49427 236 aaPredicted RBP13.26□□□□□ -0.29
HSPG2-210ENST00000481644 CD300CQ08708 224 aa13.26□□□□□ -0.29
HSPG2-210ENST00000481644 BTN1A1Q13410 526 aa13.26□□□□□ -0.29
HSPG2-210ENST00000481644 NOP10Q9NPE3 64 aaKnown RBP13.26□□□□□ -0.29
HSPG2-210ENST00000481644 ZNF492Q9P255 531 aa13.26□□□□□ -0.29
HSPG2-210ENST00000481644 RBAKDNA6NC62 111 aa13.25□□□□□ -0.29
HSPG2-210ENST00000481644 HMGB3O15347 200 aaKnown RBP13.25□□□□□ -0.29
HSPG2-210ENST00000481644 RNASE4P34096 147 aaKnown RBP13.25□□□□□ -0.29
HSPG2-210ENST00000481644 OTORQ9NRC9 128 aa13.25□□□□□ -0.29
HSPG2-210ENST00000481644 BORCS7-ASMTA0A0B4J1R7 106 aa13.24□□□□□ -0.29
HSPG2-210ENST00000481644 SNURFLB1AK76 121 aa13.24□□□□□ -0.29
HSPG2-210ENST00000481644 MBP02144 154 aa13.24□□□□□ -0.29
HSPG2-210ENST00000481644 NMBP08949 121 aa13.24□□□□□ -0.29
HSPG2-210ENST00000481644 P0DMU3 169 aa13.24□□□□□ -0.29
HSPG2-210ENST00000481644 FAM231AP0DMU4 169 aa13.24□□□□□ -0.29
HSPG2-210ENST00000481644 FAM231CP0DMU5 169 aa13.24□□□□□ -0.29
HSPG2-210ENST00000481644 ZNF138P52744 262 aa13.24□□□□□ -0.29
HSPG2-210ENST00000481644 SERF2P84101 59 aa13.24□□□□□ -0.29
HSPG2-210ENST00000481644 FAM74A1Q5RGS3 127 aa13.24□□□□□ -0.29
HSPG2-210ENST00000481644 RPL7L1Q6DKI1 246 aaKnown RBP13.24□□□□□ -0.29
HSPG2-210ENST00000481644 TMEM88Q6PEY1 159 aa13.24□□□□□ -0.29
HSPG2-210ENST00000481644 ZFAND2AQ8N6M9 145 aa13.24□□□□□ -0.29
HSPG2-210ENST00000481644 Q8TAT8 98 aa13.24□□□□□ -0.29
HSPG2-210ENST00000481644 RXFP4Q8TDU9 374 aa13.24□□□□□ -0.29
HSPG2-210ENST00000481644 HYLS1Q96M11 299 aa13.24□□□□□ -0.29
HSPG2-210ENST00000481644 SH3BGRL3Q9H299 93 aa13.24□□□□□ -0.29
HSPG2-210ENST00000481644 KMT2AQ03164 3969 aa13.23□□□□□ -0.29
HSPG2-210ENST00000481644 PGPA6NDG6 321 aa13.23□□□□□ -0.29
HSPG2-210ENST00000481644 CBY3A6NI87 242 aa13.23□□□□□ -0.29
HSPG2-210ENST00000481644 DIRC3C9JPN6 131 aa13.23□□□□□ -0.29
HSPG2-210ENST00000481644 G3V3Q6 166 aa13.23□□□□□ -0.29
HSPG2-210ENST00000481644 ZNF324O75467 553 aaPredicted RBP13.23□□□□□ -0.29
HSPG2-210ENST00000481644 ARL14EPLP0DKL9 152 aa13.23□□□□□ -0.29
HSPG2-210ENST00000481644 CMTM2Q8TAZ6 248 aa13.23□□□□□ -0.29
HSPG2-210ENST00000481644 RAB24Q969Q5 203 aa13.23□□□□□ -0.29
HSPG2-210ENST00000481644 GNPNAT1Q96EK6 184 aaPredicted RBP13.23□□□□□ -0.29
HSPG2-210ENST00000481644 TRBV7-9A0A0J9YWB2 115 aa13.22□□□□□ -0.29
HSPG2-210ENST00000481644 ATP5G1P05496 136 aa13.22□□□□□ -0.29
HSPG2-210ENST00000481644 STAG3L2P0CL84 134 aa13.22□□□□□ -0.29
HSPG2-210ENST00000481644 STAG3L3P0CL85 134 aa13.22□□□□□ -0.29
HSPG2-210ENST00000481644 ATP5G3P48201 142 aa13.22□□□□□ -0.29
HSPG2-210ENST00000481644 PRR9Q5T870 116 aa13.22□□□□□ -0.29
HSPG2-210ENST00000481644 RPH3ALQ9UNE2 315 aa13.22□□□□□ -0.29
HSPG2-210ENST00000481644 F5H768 121 aa13.21□□□□□ -0.29
HSPG2-210ENST00000481644 ZNF680Q8NEM1 530 aa13.21□□□□□ -0.29
HSPG2-210ENST00000481644 LINC00467Q9BRT7 94 aa13.21□□□□□ -0.29
HSPG2-210ENST00000481644 ARPC5O15511 151 aa13.2□□□□□ -0.3
HSPG2-210ENST00000481644 EIF4E3Q8N5X7 224 aaKnown RBP13.2□□□□□ -0.3
HSPG2-210ENST00000481644 POM121L12Q8N7R1 296 aa13.2□□□□□ -0.3
HSPG2-210ENST00000481644 ACTR3CQ9C0K3 210 aaPredicted RBP13.2□□□□□ -0.3
HSPG2-210ENST00000481644 GAGE12BA1L429 117 aa13.19□□□□□ -0.3
HSPG2-210ENST00000481644 SMLR1H3BR10 107 aa13.19□□□□□ -0.3
HSPG2-210ENST00000481644 RGS13O14921 159 aa13.19□□□□□ -0.3
HSPG2-210ENST00000481644 GAGE7O76087 117 aa13.19□□□□□ -0.3
HSPG2-210ENST00000481644 GAGE12FP0CL80 117 aa13.19□□□□□ -0.3
HSPG2-210ENST00000481644 GAGE12GP0CL81 117 aa13.19□□□□□ -0.3
HSPG2-210ENST00000481644 GAGE12IP0CL82 117 aa13.19□□□□□ -0.3
HSPG2-210ENST00000481644 GCHFRP30047 84 aa13.19□□□□□ -0.3
HSPG2-210ENST00000481644 ANXA2RQ3ZCQ2 193 aa13.19□□□□□ -0.3
HSPG2-210ENST00000481644 UBE2DNLQ8IWF7 75 aa13.19□□□□□ -0.3
HSPG2-210ENST00000481644 LINC00612Q8N6U2 182 aa13.19□□□□□ -0.3
HSPG2-210ENST00000481644 C15orf53Q8NAA6 179 aa13.19□□□□□ -0.3
HSPG2-210ENST00000481644 GSN-AS1Q9NRJ2 163 aa13.19□□□□□ -0.3
HSPG2-210ENST00000481644 TAAR5O14804 337 aa13.18□□□□□ -0.3
HSPG2-210ENST00000481644 CXorf1O96002 111 aa13.18□□□□□ -0.3
HSPG2-210ENST00000481644 DAZ2Q13117 558 aaKnown RBP13.18□□□□□ -0.3
HSPG2-210ENST00000481644 Q6ZQT7 251 aa13.18□□□□□ -0.3
HSPG2-210ENST00000481644 GOLT1AQ6ZVE7 132 aa13.18□□□□□ -0.3
HSPG2-210ENST00000481644 ARL6IP6Q8N6S5 226 aa13.18□□□□□ -0.3
HSPG2-210ENST00000481644 C11orf72Q8NBR9 251 aa13.18□□□□□ -0.3
HSPG2-210ENST00000481644 TMED6Q8WW62 240 aa13.18□□□□□ -0.3
HSPG2-210ENST00000481644 LENEPQ9Y5L5 61 aa13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms