RNA–Protein interactions for RNA: ENST00000480562.3

ABCF3-214, Transcript of ATP binding cassette subfamily F member 3, humanhuman

TSL 1 (best)

Gene ABCF3, Length 1,182 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF3-214ENST00000480562 UPK3BQ9BT76 320 aa13.02□□□□□ -0.33
ABCF3-214ENST00000480562 AGPAT4-IT1Q9H0P7 198 aa13.02□□□□□ -0.33
ABCF3-214ENST00000480562 Q9H3A6 140 aa13.02□□□□□ -0.33
ABCF3-214ENST00000480562 TMEM14CQ9P0S9 112 aa13.02□□□□□ -0.33
ABCF3-214ENST00000480562 TIMM9Q9Y5J7 89 aa13.02□□□□□ -0.33
ABCF3-214ENST00000480562 TRGV2A0A075B6R0 118 aa13.01□□□□□ -0.33
ABCF3-214ENST00000480562 H3BNG1 76 aa13.01□□□□□ -0.33
ABCF3-214ENST00000480562 CDK2AP2O75956 126 aa13.01□□□□□ -0.33
ABCF3-214ENST00000480562 RNASE4P34096 147 aaKnown RBP13.01□□□□□ -0.33
ABCF3-214ENST00000480562 HBG1P69891 147 aa13.01□□□□□ -0.33
ABCF3-214ENST00000480562 HBG2P69892 147 aa13.01□□□□□ -0.33
ABCF3-214ENST00000480562 C11orf72Q8NBR9 251 aa13.01□□□□□ -0.33
ABCF3-214ENST00000480562 CHAC2Q8WUX2 184 aa13.01□□□□□ -0.33
ABCF3-214ENST00000480562 VSIG2Q96IQ7 327 aa13.01□□□□□ -0.33
ABCF3-214ENST00000480562 GPN1Q9HCN4 374 aaPredicted RBP13.01□□□□□ -0.33
ABCF3-214ENST00000480562 MRPS16Q9Y3D3 137 aaKnown RBP13.01□□□□□ -0.33
ABCF3-214ENST00000480562 KLLNB2CW77 178 aa13□□□□□ -0.33
ABCF3-214ENST00000480562 ZNF324O75467 553 aaPredicted RBP13□□□□□ -0.33
ABCF3-214ENST00000480562 ATP6V1FQ16864 119 aa13□□□□□ -0.33
ABCF3-214ENST00000480562 MAPKAPK5-AS1Q8N8E1 139 aa13□□□□□ -0.33
ABCF3-214ENST00000480562 ZNF680Q8NEM1 530 aa13□□□□□ -0.33
ABCF3-214ENST00000480562 FAM19A4Q96LR4 140 aa13□□□□□ -0.33
ABCF3-214ENST00000480562 LINC00477Q96M19 166 aa13□□□□□ -0.33
ABCF3-214ENST00000480562 PRELID1Q9Y255 219 aa13□□□□□ -0.33
ABCF3-214ENST00000480562 A0A096LPF7 62 aa12.99□□□□□ -0.33
ABCF3-214ENST00000480562 TRGV1A0A0A0MS02 117 aa12.99□□□□□ -0.33
ABCF3-214ENST00000480562 EIF4E3Q8N5X7 224 aaKnown RBP12.99□□□□□ -0.33
ABCF3-214ENST00000480562 SLC25A2Q9BXI2 301 aa12.99□□□□□ -0.33
ABCF3-214ENST00000480562 NPCDR1Q9BY65 106 aa12.99□□□□□ -0.33
ABCF3-214ENST00000480562 KLF12Q9Y4X4 402 aa12.99□□□□□ -0.33
ABCF3-214ENST00000480562 IGKV2-40A0A087WW87 121 aaPredicted RBP12.98□□□□□ -0.33
ABCF3-214ENST00000480562 FAM240BA0A1B0GVZ2 78 aa12.98□□□□□ -0.33
ABCF3-214ENST00000480562 IGKV2D-40P01614 121 aaPredicted RBP12.98□□□□□ -0.33
ABCF3-214ENST00000480562 PDE6HQ13956 83 aa12.98□□□□□ -0.33
ABCF3-214ENST00000480562 ICAM4Q14773 271 aa12.98□□□□□ -0.33
ABCF3-214ENST00000480562 LINC00467Q9BRT7 94 aa12.98□□□□□ -0.33
ABCF3-214ENST00000480562 FUT9Q9Y231 359 aa12.98□□□□□ -0.33
ABCF3-214ENST00000480562 MPDU1O75352 247 aa12.97□□□□□ -0.33
ABCF3-214ENST00000480562 GPX1P07203 203 aa12.97□□□□□ -0.33
ABCF3-214ENST00000480562 KRTAP10-2P60368 255 aa12.97□□□□□ -0.33
ABCF3-214ENST00000480562 NHLH2Q02577 135 aa12.97□□□□□ -0.33
ABCF3-214ENST00000480562 ANXA2RQ3ZCQ2 193 aa12.97□□□□□ -0.33
ABCF3-214ENST00000480562 PRR9Q5T870 116 aa12.97□□□□□ -0.33
ABCF3-214ENST00000480562 FAM122CQ6P4D5 195 aa12.97□□□□□ -0.33
ABCF3-214ENST00000480562 Q6ZQT7 251 aa12.97□□□□□ -0.33
ABCF3-214ENST00000480562 C9orf47Q6ZRZ4 202 aa12.97□□□□□ -0.33
ABCF3-214ENST00000480562 MIR17HGQ75NE6 70 aa12.97□□□□□ -0.33
ABCF3-214ENST00000480562 THAP6Q8TBB0 222 aa12.97□□□□□ -0.33
ABCF3-214ENST00000480562 FAM167A-AS1Q96KT0 104 aa12.97□□□□□ -0.33
ABCF3-214ENST00000480562 C18orf15Q96N68 181 aa12.97□□□□□ -0.33
ABCF3-214ENST00000480562 VGLL1Q99990 258 aa12.97□□□□□ -0.33
ABCF3-214ENST00000480562 CCDC32Q9BV29 185 aa12.97□□□□□ -0.33
ABCF3-214ENST00000480562 AAMDCQ9H7C9 122 aa12.97□□□□□ -0.33
ABCF3-214ENST00000480562 TP53TG3Q9ULZ0 132 aa12.97□□□□□ -0.33
ABCF3-214ENST00000480562 A0A1W2PPQ1 181 aa12.96□□□□□ -0.33
ABCF3-214ENST00000480562 CRISP2P16562 243 aa12.96□□□□□ -0.33
ABCF3-214ENST00000480562 TCL1AP56279 114 aa12.96□□□□□ -0.33
ABCF3-214ENST00000480562 ZFAND2AQ8N6M9 145 aa12.96□□□□□ -0.33
ABCF3-214ENST00000480562 OR5C1Q8NGR4 320 aa12.96□□□□□ -0.33
ABCF3-214ENST00000480562 SPINK4O60575 86 aa12.95□□□□□ -0.34
ABCF3-214ENST00000480562 SIX6O95475 246 aa12.95□□□□□ -0.34
ABCF3-214ENST00000480562 IGHV3-53P01767 116 aa12.95□□□□□ -0.34
ABCF3-214ENST00000480562 TMEM78Q5T7P6 136 aa12.95□□□□□ -0.34
ABCF3-214ENST00000480562 NDUFA13Q9P0J0 144 aa12.95□□□□□ -0.34
ABCF3-214ENST00000480562 RGS13O14921 159 aa12.94□□□□□ -0.34
ABCF3-214ENST00000480562 NBEAP1P0C6P0 100 aa12.94□□□□□ -0.34
ABCF3-214ENST00000480562 MRPL16Q9NX20 251 aaKnown RBP12.94□□□□□ -0.34
ABCF3-214ENST00000480562 IGHV1OR15-1A0A075B7D0 117 aa12.93□□□□□ -0.34
ABCF3-214ENST00000480562 NMBP08949 121 aa12.93□□□□□ -0.34
ABCF3-214ENST00000480562 OR10J4P0C629 311 aa12.93□□□□□ -0.34
ABCF3-214ENST00000480562 BTF3P20290 206 aaKnown RBP12.93□□□□□ -0.34
ABCF3-214ENST00000480562 LINC00315P59091 139 aa12.93□□□□□ -0.34
ABCF3-214ENST00000480562 MZT2BQ6NZ67 158 aa12.93□□□□□ -0.34
ABCF3-214ENST00000480562 Q8TAT8 98 aa12.93□□□□□ -0.34
ABCF3-214ENST00000480562 FXYD5Q96DB9 178 aa12.93□□□□□ -0.34
ABCF3-214ENST00000480562 ST6GAL2Q96JF0 529 aa12.93□□□□□ -0.34
ABCF3-214ENST00000480562 OR51M1Q9H341 326 aa12.93□□□□□ -0.34
ABCF3-214ENST00000480562 OR5AC2Q9NZP5 309 aa12.93□□□□□ -0.34
ABCF3-214ENST00000480562 ZNF492Q9P255 531 aa12.93□□□□□ -0.34
ABCF3-214ENST00000480562 PAX4O43316 350 aa12.92□□□□□ -0.34
ABCF3-214ENST00000480562 LRRC37A5PQ49AS3 106 aa12.92□□□□□ -0.34
ABCF3-214ENST00000480562 IBA57Q5T440 356 aaKnown RBP12.92□□□□□ -0.34
ABCF3-214ENST00000480562 PHYHIPLQ96FC7 376 aa12.92□□□□□ -0.34
ABCF3-214ENST00000480562 PAXXQ9BUH6 204 aa12.92□□□□□ -0.34
ABCF3-214ENST00000480562 SLC25A31Q9H0C2 315 aa12.92□□□□□ -0.34
ABCF3-214ENST00000480562 E5RGE8 158 aa12.91□□□□□ -0.34
ABCF3-214ENST00000480562 SIVA1O15304 175 aa12.91□□□□□ -0.34
ABCF3-214ENST00000480562 ZNF138P52744 262 aa12.91□□□□□ -0.34
ABCF3-214ENST00000480562 ASAH1Q13510 395 aa12.91□□□□□ -0.34
ABCF3-214ENST00000480562 ARPC5LQ9BPX5 153 aa12.91□□□□□ -0.34
ABCF3-214ENST00000480562 ICOSQ9Y6W8 199 aa12.91□□□□□ -0.34
ABCF3-214ENST00000480562 H0YIZ8 118 aa12.9□□□□□ -0.34
ABCF3-214ENST00000480562 NXPH4O95158 308 aa12.9□□□□□ -0.34
ABCF3-214ENST00000480562 Q6ZRN7 208 aaPredicted RBP12.9□□□□□ -0.34
ABCF3-214ENST00000480562 Q8N1X5 172 aa12.9□□□□□ -0.34
ABCF3-214ENST00000480562 C8orf49Q96NF6 230 aa12.9□□□□□ -0.34
ABCF3-214ENST00000480562 MRPL32Q9BYC8 188 aaKnown RBP12.9□□□□□ -0.34
ABCF3-214ENST00000480562 WDR61Q9GZS3 305 aaKnown RBP12.9□□□□□ -0.34
ABCF3-214ENST00000480562 RANP62826 216 aaKnown RBP12.89□□□□□ -0.35
ABCF3-214ENST00000480562 MUC21Q5SSG8 566 aa12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms