RNA–Protein interactions for RNA: ENST00000477085.1

COL4A6-206, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 1 (best)

Gene COL4A6, Length 1,784 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-206ENST00000477085 GPR61Q9BZJ8 451 aa10.86□□□□□ -0.67
COL4A6-206ENST00000477085 AGPAT4-IT1Q9H0P7 198 aa10.86□□□□□ -0.67
COL4A6-206ENST00000477085 OSTCQ9NRP0 149 aa10.86□□□□□ -0.67
COL4A6-206ENST00000477085 ZFP30Q9Y2G7 519 aa10.86□□□□□ -0.67
COL4A6-206ENST00000477085 C19orf71A6NCJ1 209 aa10.85□□□□□ -0.67
COL4A6-206ENST00000477085 PPP1R2P9O14990 202 aa10.85□□□□□ -0.67
COL4A6-206ENST00000477085 TFPI2P48307 235 aa10.85□□□□□ -0.67
COL4A6-206ENST00000477085 FAM3BP58499 235 aaPredicted RBP10.85□□□□□ -0.67
COL4A6-206ENST00000477085 PEMTQ9UBM1 199 aa10.85□□□□□ -0.67
COL4A6-206ENST00000477085 TEP1Q99973 2627 aaKnown RBP10.85□□□□□ -0.67
COL4A6-206ENST00000477085 RBAKDNA6NC62 111 aa10.85□□□□□ -0.67
COL4A6-206ENST00000477085 CA1P00915 261 aaPredicted RBP10.85□□□□□ -0.67
COL4A6-206ENST00000477085 BMI1P35226 326 aa10.85□□□□□ -0.67
COL4A6-206ENST00000477085 IBA57Q5T440 356 aaKnown RBP10.85□□□□□ -0.67
COL4A6-206ENST00000477085 FAM231DQ6ZW35 169 aa10.85□□□□□ -0.67
COL4A6-206ENST00000477085 PRR25Q96S07 402 aa10.85□□□□□ -0.67
COL4A6-206ENST00000477085 CLEC5AQ9NY25 188 aa10.85□□□□□ -0.67
COL4A6-206ENST00000477085 F6UB75 175 aa10.84□□□□□ -0.67
COL4A6-206ENST00000477085 K7EQG2 157 aa10.84□□□□□ -0.67
COL4A6-206ENST00000477085 RAB5AP20339 215 aa10.84□□□□□ -0.67
COL4A6-206ENST00000477085 ZNF738Q8NE65 137 aa10.84□□□□□ -0.67
COL4A6-206ENST00000477085 DEFB114Q30KQ6 69 aa10.83□□□□□ -0.68
COL4A6-206ENST00000477085 C9orf47Q6ZRZ4 202 aa10.83□□□□□ -0.68
COL4A6-206ENST00000477085 COX8CQ7Z4L0 72 aa10.83□□□□□ -0.68
COL4A6-206ENST00000477085 PYGO2Q9BRQ0 406 aa10.83□□□□□ -0.68
COL4A6-206ENST00000477085 A0A1B0GUS0 222 aa10.82□□□□□ -0.68
COL4A6-206ENST00000477085 ZNF80P51504 273 aaPredicted RBP10.82□□□□□ -0.68
COL4A6-206ENST00000477085 NDUFA11Q86Y39 141 aa10.82□□□□□ -0.68
COL4A6-206ENST00000477085 IL36BQ9NZH7 164 aa10.82□□□□□ -0.68
COL4A6-206ENST00000477085 ZNF492Q9P255 531 aa10.82□□□□□ -0.68
COL4A6-206ENST00000477085 JMJD1CQ15652 2540 aa10.82□□□□□ -0.68
COL4A6-206ENST00000477085 C1orf196B1AJZ1 125 aa10.82□□□□□ -0.68
COL4A6-206ENST00000477085 M0QZ24 198 aa10.82□□□□□ -0.68
COL4A6-206ENST00000477085 OVOL1O14753 267 aa10.82□□□□□ -0.68
COL4A6-206ENST00000477085 RAB5BP61020 215 aa10.82□□□□□ -0.68
COL4A6-206ENST00000477085 TMEM61Q8N0U2 210 aa10.82□□□□□ -0.68
COL4A6-206ENST00000477085 IMMP2LQ96T52 175 aa10.82□□□□□ -0.68
COL4A6-206ENST00000477085 TRBV24-1A0A075B6N3 115 aa10.81□□□□□ -0.68
COL4A6-206ENST00000477085 FBLL1A6NHQ2 334 aaKnown RBP10.81□□□□□ -0.68
COL4A6-206ENST00000477085 ZNF705GA8MUZ8 300 aaPredicted RBP10.81□□□□□ -0.68
COL4A6-206ENST00000477085 ZNF688P0C7X2 276 aa10.81□□□□□ -0.68
COL4A6-206ENST00000477085 CT45A10P0DMU9 189 aa10.81□□□□□ -0.68
COL4A6-206ENST00000477085 SAPCD1Q5SSQ6 148 aa10.81□□□□□ -0.68
COL4A6-206ENST00000477085 GDF5OSQ5U4N7 250 aa10.81□□□□□ -0.68
COL4A6-206ENST00000477085 IZUMO1RA6ND01 250 aa10.8□□□□□ -0.68
COL4A6-206ENST00000477085 NPIPB6E9PJ23 425 aa10.8□□□□□ -0.68
COL4A6-206ENST00000477085 GATCO43716 136 aaKnown RBP10.8□□□□□ -0.68
COL4A6-206ENST00000477085 ZNF138P52744 262 aa10.8□□□□□ -0.68
COL4A6-206ENST00000477085 CD300EQ496F6 205 aaPredicted RBP10.8□□□□□ -0.68
COL4A6-206ENST00000477085 ZNF575Q86XF7 245 aa10.8□□□□□ -0.68
COL4A6-206ENST00000477085 ZFP82Q8N141 532 aa10.8□□□□□ -0.68
COL4A6-206ENST00000477085 OR8A1Q8NGG7 326 aa10.8□□□□□ -0.68
COL4A6-206ENST00000477085 PPP1R14DQ9NXH3 145 aa10.8□□□□□ -0.68
COL4A6-206ENST00000477085 FBN1P35555 2871 aaKnown RBP10.8□□□□□ -0.68
COL4A6-206ENST00000477085 A0A1W2PPQ1 181 aa10.8□□□□□ -0.68
COL4A6-206ENST00000477085 SMIM27A0A1W2PRY6 76 aa10.8□□□□□ -0.68
COL4A6-206ENST00000477085 FRMD6-AS1P0C7T7 363 aa10.8□□□□□ -0.68
COL4A6-206ENST00000477085 ID1P41134 155 aa10.8□□□□□ -0.68
COL4A6-206ENST00000477085 SMUG1Q53HV7 270 aa10.8□□□□□ -0.68
COL4A6-206ENST00000477085 PSMG4Q5JS54 123 aa10.8□□□□□ -0.68
COL4A6-206ENST00000477085 Q6ZQT7 251 aa10.8□□□□□ -0.68
COL4A6-206ENST00000477085 FAM210BQ96KR6 192 aa10.8□□□□□ -0.68
COL4A6-206ENST00000477085 S100PP25815 95 aa10.79□□□□□ -0.68
COL4A6-206ENST00000477085 TCL1AP56279 114 aa10.79□□□□□ -0.68
COL4A6-206ENST00000477085 TMEM78Q5T7P6 136 aa10.79□□□□□ -0.68
COL4A6-206ENST00000477085 SAMD13Q5VXD3 122 aa10.79□□□□□ -0.68
COL4A6-206ENST00000477085 DYNLRB2Q8TF09 96 aa10.79□□□□□ -0.68
COL4A6-206ENST00000477085 FAM19A4Q96LR4 140 aa10.79□□□□□ -0.68
COL4A6-206ENST00000477085 RPP21Q9H633 154 aaKnown RBP10.79□□□□□ -0.68
COL4A6-206ENST00000477085 SIGLEC8Q9NYZ4 499 aa10.79□□□□□ -0.68
COL4A6-206ENST00000477085 SH2D1AO60880 128 aa10.78□□□□□ -0.68
COL4A6-206ENST00000477085 P01737 135 aa10.78□□□□□ -0.68
COL4A6-206ENST00000477085 RPL19P84098 196 aaKnown RBP10.78□□□□□ -0.68
COL4A6-206ENST00000477085 PRR9Q5T870 116 aa10.78□□□□□ -0.68
COL4A6-206ENST00000477085 SPATA3Q8NHX4 192 aa10.78□□□□□ -0.68
COL4A6-206ENST00000477085 LINC00477Q96M19 166 aa10.78□□□□□ -0.68
COL4A6-206ENST00000477085 CITED1Q99966 193 aa10.78□□□□□ -0.68
COL4A6-206ENST00000477085 BIN3Q9NQY0 253 aa10.78□□□□□ -0.68
COL4A6-206ENST00000477085 WNK1Q9H4A3 2382 aa10.78□□□□□ -0.68
COL4A6-206ENST00000477085 VWFP04275 2813 aa10.78□□□□□ -0.68
COL4A6-206ENST00000477085 GZMBP10144 247 aa10.77□□□□□ -0.68
COL4A6-206ENST00000477085 CD33P20138 364 aa10.77□□□□□ -0.68
COL4A6-206ENST00000477085 HIST1H1AQ02539 215 aaPredicted RBP10.77□□□□□ -0.68
COL4A6-206ENST00000477085 KRTAP24-1Q3LI83 254 aa10.77□□□□□ -0.68
COL4A6-206ENST00000477085 KCNIP4Q6PIL6 250 aa10.77□□□□□ -0.68
COL4A6-206ENST00000477085 RBPMS2Q6ZRY4 209 aaKnown RBP10.77□□□□□ -0.68
COL4A6-206ENST00000477085 PRIMA1Q86XR5 153 aa10.77□□□□□ -0.68
COL4A6-206ENST00000477085 OR10J6PQ8NGY7 276 aa10.77□□□□□ -0.68
COL4A6-206ENST00000477085 GTSF1Q8WW33 167 aa10.77□□□□□ -0.68
COL4A6-206ENST00000477085 DAZAP1Q96EP5 407 aaKnown RBP10.77□□□□□ -0.68
COL4A6-206ENST00000477085 SAV1Q9H4B6 383 aaPredicted RBP10.77□□□□□ -0.68
COL4A6-206ENST00000477085 ZNF256Q9Y2P7 627 aaPredicted RBP10.77□□□□□ -0.68
COL4A6-206ENST00000477085 MAST4O15021 2626 aa10.77□□□□□ -0.68
COL4A6-206ENST00000477085 SNRPD3P62318 126 aaKnown RBP10.77□□□□□ -0.69
COL4A6-206ENST00000477085 PAFAH1B2P68402 229 aa10.77□□□□□ -0.69
COL4A6-206ENST00000477085 KIR3DS1Q14943 382 aa10.77□□□□□ -0.69
COL4A6-206ENST00000477085 FAM162BQ5T6X4 162 aa10.77□□□□□ -0.69
COL4A6-206ENST00000477085 ZFAND2AQ8N6M9 145 aa10.77□□□□□ -0.69
COL4A6-206ENST00000477085 TSKUQ8WUA8 353 aa10.77□□□□□ -0.69
COL4A6-206ENST00000477085 RPS10P46783 165 aaKnown RBP10.76□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 101.2 ms