RNA–Protein interactions for RNA: ENST00000476858.5

APTX-220, Transcript of aprataxin, humanhuman

TSL 1 (best) BASIC

Gene APTX, Length 1,068 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-220ENST00000476858 BTN1A1Q13410 526 aa8.88□□□□□ -0.99
APTX-220ENST00000476858 CEMP1Q6PRD7 247 aaPredicted RBP8.88□□□□□ -0.99
APTX-220ENST00000476858 MRPL53Q96EL3 112 aaKnown RBP8.88□□□□□ -0.99
APTX-220ENST00000476858 HYLS1Q96M11 299 aa8.88□□□□□ -0.99
APTX-220ENST00000476858 TMPRSS5Q9H3S3 457 aa8.88□□□□□ -0.99
APTX-220ENST00000476858 GOLT1BQ9Y3E0 138 aa8.88□□□□□ -0.99
APTX-220ENST00000476858 ALMS1Q8TCU4 4167 aa8.88□□□□□ -0.99
APTX-220ENST00000476858 TRAV12-3A0A0B4J271 114 aa8.87□□□□□ -0.99
APTX-220ENST00000476858 A0A1W2PPV4 95 aa8.87□□□□□ -0.99
APTX-220ENST00000476858 HTN1P15515 57 aa8.87□□□□□ -0.99
APTX-220ENST00000476858 GCHFRP30047 84 aa8.87□□□□□ -0.99
APTX-220ENST00000476858 CDKN1BP46527 198 aa8.87□□□□□ -0.99
APTX-220ENST00000476858 FAM222AQ5U5X8 452 aa8.87□□□□□ -0.99
APTX-220ENST00000476858 ZFAND2AQ8N6M9 145 aa8.87□□□□□ -0.99
APTX-220ENST00000476858 TMEM208Q9BTX3 173 aa8.87□□□□□ -0.99
APTX-220ENST00000476858 PPP1R14DQ9NXH3 145 aa8.87□□□□□ -0.99
APTX-220ENST00000476858 RPH3ALQ9UNE2 315 aa8.87□□□□□ -0.99
APTX-220ENST00000476858 YTHDF2Q9Y5A9 579 aaKnown RBP8.87□□□□□ -0.99
APTX-220ENST00000476858 TRAV8-1A0A0A6YYK1 113 aa8.86□□□□□ -0.99
APTX-220ENST00000476858 BORCS7-ASMTA0A0B4J1R7 106 aa8.86□□□□□ -0.99
APTX-220ENST00000476858 LCE6AA0A183 80 aa8.86□□□□□ -0.99
APTX-220ENST00000476858 PGPA6NDG6 321 aa8.86□□□□□ -0.99
APTX-220ENST00000476858 HMSDA8MTL9 139 aa8.86□□□□□ -0.99
APTX-220ENST00000476858 HBE1P02100 147 aa8.86□□□□□ -0.99
APTX-220ENST00000476858 AMBPP02760 352 aa8.86□□□□□ -0.99
APTX-220ENST00000476858 FGF8P55075 233 aaPredicted RBP8.86□□□□□ -0.99
APTX-220ENST00000476858 TAS2R45P59539 299 aa8.86□□□□□ -0.99
APTX-220ENST00000476858 RRN3P1Q2M238 152 aa8.86□□□□□ -0.99
APTX-220ENST00000476858 C9orf47Q6ZRZ4 202 aa8.86□□□□□ -0.99
APTX-220ENST00000476858 SGK494Q96LW2 274 aa8.86□□□□□ -0.99
APTX-220ENST00000476858 LINC01587Q99440 93 aa8.86□□□□□ -0.99
APTX-220ENST00000476858 ARPC5LQ9BPX5 153 aa8.86□□□□□ -0.99
APTX-220ENST00000476858 AAMDCQ9H7C9 122 aa8.86□□□□□ -0.99
APTX-220ENST00000476858 DKK2Q9UBU2 259 aa8.86□□□□□ -0.99
APTX-220ENST00000476858 PRELID1Q9Y255 219 aa8.86□□□□□ -0.99
APTX-220ENST00000476858 HYDINQ4G0P3 5121 aa8.86□□□□□ -0.99
APTX-220ENST00000476858 KRTAP9-1A8MXZ3 250 aaPredicted RBP8.85□□□□□ -0.99
APTX-220ENST00000476858 DIRC3C9JPN6 131 aa8.85□□□□□ -0.99
APTX-220ENST00000476858 BCL2L11O43521 198 aa8.85□□□□□ -0.99
APTX-220ENST00000476858 SERF2P84101 59 aa8.85□□□□□ -0.99
APTX-220ENST00000476858 ZNF345Q14585 488 aa8.85□□□□□ -0.99
APTX-220ENST00000476858 LGALSLQ3ZCW2 172 aaPredicted RBP8.85□□□□□ -0.99
APTX-220ENST00000476858 PQLC2Q6ZP29 291 aa8.85□□□□□ -0.99
APTX-220ENST00000476858 TMUB2Q71RG4 321 aa8.85□□□□□ -0.99
APTX-220ENST00000476858 SUN5Q8TC36 379 aa8.85□□□□□ -0.99
APTX-220ENST00000476858 GNPNAT1Q96EK6 184 aaPredicted RBP8.85□□□□□ -0.99
APTX-220ENST00000476858 TVP23CQ96ET8 276 aa8.85□□□□□ -0.99
APTX-220ENST00000476858 OTORQ9NRC9 128 aa8.85□□□□□ -0.99
APTX-220ENST00000476858 SMIM9A6NGZ8 99 aa8.84□□□□□ -0.99
APTX-220ENST00000476858 KLLNB2CW77 178 aa8.84□□□□□ -0.99
APTX-220ENST00000476858 GGTLC3B5MD39 225 aa8.84□□□□□ -0.99
APTX-220ENST00000476858 ZNF324O75467 553 aaPredicted RBP8.84□□□□□ -0.99
APTX-220ENST00000476858 JTBO76095 146 aa8.84□□□□□ -0.99
APTX-220ENST00000476858 RNASE4P34096 147 aaKnown RBP8.84□□□□□ -0.99
APTX-220ENST00000476858 TCTE3Q8IZS6 198 aa8.84□□□□□ -0.99
APTX-220ENST00000476858 ODF3Q96PU9 254 aa8.84□□□□□ -0.99
APTX-220ENST00000476858 KRTAP9-2Q9BYQ4 174 aa8.84□□□□□ -0.99
APTX-220ENST00000476858 ACTR3CQ9C0K3 210 aaPredicted RBP8.84□□□□□ -0.99
APTX-220ENST00000476858 ZNF492Q9P255 531 aa8.84□□□□□ -0.99
APTX-220ENST00000476858 C7orf71A4D174 169 aa8.83□□□□□ -1
APTX-220ENST00000476858 NUPR2A6NF83 97 aa8.83□□□□□ -1
APTX-220ENST00000476858 TAAR5O14804 337 aa8.83□□□□□ -1
APTX-220ENST00000476858 CRISP2P16562 243 aa8.83□□□□□ -1
APTX-220ENST00000476858 LEPP41159 167 aa8.83□□□□□ -1
APTX-220ENST00000476858 ZNF138P52744 262 aa8.83□□□□□ -1
APTX-220ENST00000476858 GOLT1AQ6ZVE7 132 aa8.83□□□□□ -1
APTX-220ENST00000476858 LYPD1Q8N2G4 141 aa8.83□□□□□ -1
APTX-220ENST00000476858 RNASE8Q8TDE3 154 aaKnown RBP8.83□□□□□ -1
APTX-220ENST00000476858 LINC00477Q96M19 166 aa8.83□□□□□ -1
APTX-220ENST00000476858 ZNF471Q9BX82 626 aaPredicted RBP8.83□□□□□ -1
APTX-220ENST00000476858 TP53TG3Q9ULZ0 132 aa8.83□□□□□ -1
APTX-220ENST00000476858 CTXND1A0A1B0GTU2 59 aa8.82□□□□□ -1
APTX-220ENST00000476858 MBP02144 154 aa8.82□□□□□ -1
APTX-220ENST00000476858 SPART-AS1P0CW21 52 aa8.82□□□□□ -1
APTX-220ENST00000476858 TAS2R60P59551 318 aa8.82□□□□□ -1
APTX-220ENST00000476858 UBE2G2P60604 165 aa8.82□□□□□ -1
APTX-220ENST00000476858 TMEM78Q5T7P6 136 aa8.82□□□□□ -1
APTX-220ENST00000476858 IQCF2Q8IXL9 164 aa8.82□□□□□ -1
APTX-220ENST00000476858 A0A0D9SG52 128 aa8.81□□□□□ -1
APTX-220ENST00000476858 A0A1B0GV50 99 aa8.81□□□□□ -1
APTX-220ENST00000476858 IGLL5B9A064 214 aa8.81□□□□□ -1
APTX-220ENST00000476858 F6UZH7 168 aa8.81□□□□□ -1
APTX-220ENST00000476858 H7BYZ3 331 aa8.81□□□□□ -1
APTX-220ENST00000476858 CXorf1O96002 111 aa8.81□□□□□ -1
APTX-220ENST00000476858 IGLV2-11P01706 119 aa8.81□□□□□ -1
APTX-220ENST00000476858 SLC25A5P05141 298 aaKnown RBP8.81□□□□□ -1
APTX-220ENST00000476858 TSPOP30536 169 aa8.81□□□□□ -1
APTX-220ENST00000476858 SUMO1P63165 101 aaKnown RBP8.81□□□□□ -1
APTX-220ENST00000476858 AKR1C8PQ5T2L2 129 aa8.81□□□□□ -1
APTX-220ENST00000476858 TMED6Q8WW62 240 aa8.81□□□□□ -1
APTX-220ENST00000476858 LINC00479Q96M42 142 aa8.81□□□□□ -1
APTX-220ENST00000476858 APLNQ9ULZ1 77 aa8.81□□□□□ -1
APTX-220ENST00000476858 VPS13DQ5THJ4 4388 aa8.8□□□□□ -1
APTX-220ENST00000476858 DEFB131BA0A096LNP1 70 aa8.8□□□□□ -1
APTX-220ENST00000476858 TRAV10A0A0B4J240 114 aa8.8□□□□□ -1
APTX-220ENST00000476858 KRTAP9-6A0A140TA67 174 aa8.8□□□□□ -1
APTX-220ENST00000476858 TMEM189A5PLL7 270 aa8.8□□□□□ -1
APTX-220ENST00000476858 MAP1LC3B2A6NCE7 125 aa8.8□□□□□ -1
APTX-220ENST00000476858 C1QBP02746 253 aa8.8□□□□□ -1
APTX-220ENST00000476858 GPX1P07203 203 aa8.8□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 87 ms