RNA–Protein interactions for RNA: ENST00000475251.1

SKA3-206, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

TSL 2

Gene SKA3, Length 397 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-206ENST00000475251 LINC00477Q96M19 166 aa8.53□□□□□ -1.04
SKA3-206ENST00000475251 ARPC5LQ9BPX5 153 aa8.53□□□□□ -1.04
SKA3-206ENST00000475251 SRRM2Q9UQ35 2752 aaKnown RBP8.52□□□□□ -1.05
SKA3-206ENST00000475251 H3BQ15 152 aa8.52□□□□□ -1.05
SKA3-206ENST00000475251 RGS13O14921 159 aa8.52□□□□□ -1.05
SKA3-206ENST00000475251 IGHV3-53P01767 116 aa8.52□□□□□ -1.05
SKA3-206ENST00000475251 PLA2G1BP04054 148 aaKnown RBP8.52□□□□□ -1.05
SKA3-206ENST00000475251 NMBP08949 121 aa8.52□□□□□ -1.05
SKA3-206ENST00000475251 TAS2R30P59541 319 aa8.52□□□□□ -1.05
SKA3-206ENST00000475251 OR1L4Q8NGR5 311 aa8.52□□□□□ -1.05
SKA3-206ENST00000475251 RAB2BQ8WUD1 216 aa8.52□□□□□ -1.05
SKA3-206ENST00000475251 C8orf49Q96NF6 230 aa8.52□□□□□ -1.05
SKA3-206ENST00000475251 DNAJC4Q9NNZ3 241 aa8.52□□□□□ -1.05
SKA3-206ENST00000475251 PRELID1Q9Y255 219 aa8.52□□□□□ -1.05
SKA3-206ENST00000475251 KLF12Q9Y4X4 402 aa8.52□□□□□ -1.05
SKA3-206ENST00000475251 TRGV4A0A0C4DH28 118 aa8.51□□□□□ -1.05
SKA3-206ENST00000475251 PRAF2O60831 178 aa8.51□□□□□ -1.05
SKA3-206ENST00000475251 CCNKO75909 580 aa8.51□□□□□ -1.05
SKA3-206ENST00000475251 ORM1P02763 201 aa8.51□□□□□ -1.05
SKA3-206ENST00000475251 GPX1P07203 203 aa8.51□□□□□ -1.05
SKA3-206ENST00000475251 TNFSF8P32971 234 aa8.51□□□□□ -1.05
SKA3-206ENST00000475251 WFDC10BQ8IUB3 73 aa8.51□□□□□ -1.05
SKA3-206ENST00000475251 C12orf45Q8N5I9 185 aaPredicted RBP8.51□□□□□ -1.05
SKA3-206ENST00000475251 DYNC2LI1Q8TCX1 351 aa8.51□□□□□ -1.05
SKA3-206ENST00000475251 PFDN5Q99471 154 aa8.51□□□□□ -1.05
SKA3-206ENST00000475251 SOSTQ9BQB4 213 aa8.51□□□□□ -1.05
SKA3-206ENST00000475251 BCL7BQ9BQE9 202 aa8.51□□□□□ -1.05
SKA3-206ENST00000475251 TXNDC17Q9BRA2 123 aa8.51□□□□□ -1.05
SKA3-206ENST00000475251 MRPL32Q9BYC8 188 aaKnown RBP8.51□□□□□ -1.05
SKA3-206ENST00000475251 MRPL16Q9NX20 251 aaKnown RBP8.51□□□□□ -1.05
SKA3-206ENST00000475251 K7EQD1 137 aa8.5□□□□□ -1.05
SKA3-206ENST00000475251 SCGB1D2O95969 90 aa8.5□□□□□ -1.05
SKA3-206ENST00000475251 C1QBP02746 253 aa8.5□□□□□ -1.05
SKA3-206ENST00000475251 CRYGDP07320 174 aa8.5□□□□□ -1.05
SKA3-206ENST00000475251 SMIM18P0DKX4 95 aa8.5□□□□□ -1.05
SKA3-206ENST00000475251 CRISP2P16562 243 aa8.5□□□□□ -1.05
SKA3-206ENST00000475251 RNASE4P34096 147 aaKnown RBP8.5□□□□□ -1.05
SKA3-206ENST00000475251 HAMPP81172 84 aa8.5□□□□□ -1.05
SKA3-206ENST00000475251 CD300CQ08708 224 aa8.5□□□□□ -1.05
SKA3-206ENST00000475251 ZNF415Q09FC8 603 aa8.5□□□□□ -1.05
SKA3-206ENST00000475251 BTN1A1Q13410 526 aa8.5□□□□□ -1.05
SKA3-206ENST00000475251 FHL2Q14192 279 aa8.5□□□□□ -1.05
SKA3-206ENST00000475251 PYDC2Q56P42 97 aa8.5□□□□□ -1.05
SKA3-206ENST00000475251 SERTAD4-AS1Q5TG53 156 aa8.5□□□□□ -1.05
SKA3-206ENST00000475251 MORN5Q5VZ52 161 aa8.5□□□□□ -1.05
SKA3-206ENST00000475251 SYT8Q8NBV8 401 aa8.5□□□□□ -1.05
SKA3-206ENST00000475251 TRIM63Q969Q1 353 aa8.5□□□□□ -1.05
SKA3-206ENST00000475251 FAM19A4Q96LR4 140 aa8.5□□□□□ -1.05
SKA3-206ENST00000475251 MGST2Q99735 147 aa8.5□□□□□ -1.05
SKA3-206ENST00000475251 IGHV1OR15-1A0A075B7D0 117 aa8.49□□□□□ -1.05
SKA3-206ENST00000475251 TRAV5A0A0B4J249 113 aa8.49□□□□□ -1.05
SKA3-206ENST00000475251 C9orf170A2RU37 121 aa8.49□□□□□ -1.05
SKA3-206ENST00000475251 KRTAP29-1A8MX34 341 aaPredicted RBP8.49□□□□□ -1.05
SKA3-206ENST00000475251 E5RGE8 158 aa8.49□□□□□ -1.05
SKA3-206ENST00000475251 HIST1H1EP10412 219 aaKnown RBP8.49□□□□□ -1.05
SKA3-206ENST00000475251 CAMLGP49069 296 aa8.49□□□□□ -1.05
SKA3-206ENST00000475251 PDE6HQ13956 83 aa8.49□□□□□ -1.05
SKA3-206ENST00000475251 IQCF2Q8IXL9 164 aa8.49□□□□□ -1.05
SKA3-206ENST00000475251 MRPS26Q9BYN8 205 aaKnown RBP8.49□□□□□ -1.05
SKA3-206ENST00000475251 SRRQ9GZT4 340 aa8.49□□□□□ -1.05
SKA3-206ENST00000475251 AAMDCQ9H7C9 122 aa8.49□□□□□ -1.05
SKA3-206ENST00000475251 TIMM9Q9Y5J7 89 aa8.49□□□□□ -1.05
SKA3-206ENST00000475251 TRBV19A0A075B6N1 114 aa8.48□□□□□ -1.05
SKA3-206ENST00000475251 C9JCJ5 164 aa8.48□□□□□ -1.05
SKA3-206ENST00000475251 TMBIM6P55061 237 aa8.48□□□□□ -1.05
SKA3-206ENST00000475251 ERCC8Q13216 396 aa8.48□□□□□ -1.05
SKA3-206ENST00000475251 TMEM78Q5T7P6 136 aa8.48□□□□□ -1.05
SKA3-206ENST00000475251 SH2D6Q7Z4S9 175 aa8.48□□□□□ -1.05
SKA3-206ENST00000475251 DEFB104AQ8WTQ1 72 aa8.48□□□□□ -1.05
SKA3-206ENST00000475251 SLIRPQ9GZT3 109 aaKnown RBP8.48□□□□□ -1.05
SKA3-206ENST00000475251 AGPAT4-IT1Q9H0P7 198 aa8.48□□□□□ -1.05
SKA3-206ENST00000475251 M0R3E3 92 aa8.47□□□□□ -1.05
SKA3-206ENST00000475251 NOL3O60936 208 aaKnown RBP8.47□□□□□ -1.05
SKA3-206ENST00000475251 GYPEP15421 78 aa8.47□□□□□ -1.05
SKA3-206ENST00000475251 IAH1Q2TAA2 248 aaPredicted RBP8.47□□□□□ -1.05
SKA3-206ENST00000475251 C9orf47Q6ZRZ4 202 aa8.47□□□□□ -1.05
SKA3-206ENST00000475251 NRARPQ7Z6K4 114 aa8.47□□□□□ -1.05
SKA3-206ENST00000475251 Q8N814 137 aa8.47□□□□□ -1.05
SKA3-206ENST00000475251 TMEM14CQ9P0S9 112 aa8.47□□□□□ -1.05
SKA3-206ENST00000475251 TP53TG3Q9ULZ0 132 aa8.47□□□□□ -1.05
SKA3-206ENST00000475251 LRCOL1A6NCL2 159 aa8.46□□□□□ -1.06
SKA3-206ENST00000475251 L7N2F9 121 aa8.46□□□□□ -1.06
SKA3-206ENST00000475251 VAMP2P63027 116 aa8.46□□□□□ -1.06
SKA3-206ENST00000475251 ARL16Q0P5N6 197 aa8.46□□□□□ -1.06
SKA3-206ENST00000475251 MIC13Q5XKP0 118 aa8.46□□□□□ -1.06
SKA3-206ENST00000475251 OR10G4Q8NGN3 311 aa8.46□□□□□ -1.06
SKA3-206ENST00000475251 C20orf85Q9H1P6 137 aa8.46□□□□□ -1.06
SKA3-206ENST00000475251 GSKIPQ9P0R6 139 aa8.46□□□□□ -1.06
SKA3-206ENST00000475251 RCL1Q9Y2P8 373 aaKnown RBP8.46□□□□□ -1.06
SKA3-206ENST00000475251 IGHV3-38A0A0C4DH36 116 aa8.45□□□□□ -1.06
SKA3-206ENST00000475251 TRBV7-9A0A0J9YWB2 115 aa8.45□□□□□ -1.06
SKA3-206ENST00000475251 C7orf66A4D0T2 115 aa8.45□□□□□ -1.06
SKA3-206ENST00000475251 ZFAND2AQ8N6M9 145 aa8.45□□□□□ -1.06
SKA3-206ENST00000475251 SPXQ9BT56 116 aa8.45□□□□□ -1.06
SKA3-206ENST00000475251 UQCC1Q9NVA1 299 aa8.45□□□□□ -1.06
SKA3-206ENST00000475251 ZNF492Q9P255 531 aa8.45□□□□□ -1.06
SKA3-206ENST00000475251 NAP1L6A6NFF2 107 aa8.44□□□□□ -1.06
SKA3-206ENST00000475251 IBA57-AS1B1ANH7 110 aa8.44□□□□□ -1.06
SKA3-206ENST00000475251 NDUFB4O95168 129 aa8.44□□□□□ -1.06
SKA3-206ENST00000475251 SFTA3P0C7M3 94 aa8.44□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 122.7 ms