RNA–Protein interactions for RNA: ENST00000474273.5

SSB-210, Transcript of Sjogren syndrome antigen B, humanhuman

TSL 2

Gene SSB, Length 735 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSB-210ENST00000474273 TMEM106AQ96A25 262 aa0.9□□□□□ -2.27
SSB-210ENST00000474273 SLC25A21Q9BQT8 299 aaPredicted RBP0.9□□□□□ -2.27
SSB-210ENST00000474273 PRADC1Q9BSG0 188 aa0.9□□□□□ -2.27
SSB-210ENST00000474273 CCDC32Q9BV29 185 aa0.9□□□□□ -2.27
SSB-210ENST00000474273 RTL8AQ9BWD3 113 aa0.9□□□□□ -2.27
SSB-210ENST00000474273 NIT2Q9NQR4 276 aa0.9□□□□□ -2.27
SSB-210ENST00000474273 RASL12Q9NYN1 266 aa0.9□□□□□ -2.27
SSB-210ENST00000474273 BAIAP2Q9UQB8 552 aa0.9□□□□□ -2.27
SSB-210ENST00000474273 TIMM9Q9Y5J7 89 aa0.9□□□□□ -2.27
SSB-210ENST00000474273 MYO7AQ13402 2215 aa0.9□□□□□ -2.27
SSB-210ENST00000474273 RTL9Q8NET4 1388 aa0.9□□□□□ -2.27
SSB-210ENST00000474273 MRC1P22897 1456 aa0.9□□□□□ -2.27
SSB-210ENST00000474273 ZNF831Q5JPB2 1677 aa0.9□□□□□ -2.27
SSB-210ENST00000474273 MGAMO43451 1857 aa0.9□□□□□ -2.27
SSB-210ENST00000474273 C10orf71Q711Q0 1435 aa0.89□□□□□ -2.27
SSB-210ENST00000474273 PAPPAQ13219 1627 aa0.89□□□□□ -2.27
SSB-210ENST00000474273 LAMB4A4D0S4 1761 aa0.89□□□□□ -2.27
SSB-210ENST00000474273 RGPD3A6NKT7 1758 aaPredicted RBP0.89□□□□□ -2.27
SSB-210ENST00000474273 BCORQ6W2J9 1755 aa0.89□□□□□ -2.27
SSB-210ENST00000474273 RGPD4Q7Z3J3 1758 aa0.89□□□□□ -2.27
SSB-210ENST00000474273 DLEC1Q9Y238 1755 aa0.89□□□□□ -2.27
SSB-210ENST00000474273 TNRC6CQ9HCJ0 1690 aaKnown RBP0.89□□□□□ -2.27
SSB-210ENST00000474273 RFX7Q2KHR2 1363 aa0.89□□□□□ -2.27
SSB-210ENST00000474273 MED23Q9ULK4 1368 aa0.89□□□□□ -2.27
SSB-210ENST00000474273 LOC107984640A0A0U1RRK4 108 aa0.89□□□□□ -2.27
SSB-210ENST00000474273 A0A1B0GX51 115 aa0.89□□□□□ -2.27
SSB-210ENST00000474273 J3KT08 172 aa0.89□□□□□ -2.27
SSB-210ENST00000474273 DEGS1O15121 323 aa0.89□□□□□ -2.27
SSB-210ENST00000474273 NDUFA2O43678 99 aa0.89□□□□□ -2.27
SSB-210ENST00000474273 NAPSAO96009 420 aa0.89□□□□□ -2.27
SSB-210ENST00000474273 APOA2P02652 100 aa0.89□□□□□ -2.27
SSB-210ENST00000474273 OR10J4P0C629 311 aa0.89□□□□□ -2.27
SSB-210ENST00000474273 BCL2P10415 239 aa0.89□□□□□ -2.27
SSB-210ENST00000474273 SDC4P31431 198 aa0.89□□□□□ -2.27
SSB-210ENST00000474273 SRP14P37108 136 aaKnown RBP0.89□□□□□ -2.27
SSB-210ENST00000474273 AKR1C3P42330 323 aa0.89□□□□□ -2.27
SSB-210ENST00000474273 FXYD2P54710 66 aa0.89□□□□□ -2.27
SSB-210ENST00000474273 TMBIM6P55061 237 aa0.89□□□□□ -2.27
SSB-210ENST00000474273 ROMO1P60602 79 aa0.89□□□□□ -2.27
SSB-210ENST00000474273 RPS28P62857 69 aaKnown RBP0.89□□□□□ -2.27
SSB-210ENST00000474273 UBE2BP63146 152 aa0.89□□□□□ -2.27
SSB-210ENST00000474273 EIF5AP63241 154 aaKnown RBP0.89□□□□□ -2.27
SSB-210ENST00000474273 ZNF345Q14585 488 aa0.89□□□□□ -2.27
SSB-210ENST00000474273 KHDC3LQ587J8 217 aa0.89□□□□□ -2.27
SSB-210ENST00000474273 PABPC1L2AQ5JQF8 200 aa0.89□□□□□ -2.27
SSB-210ENST00000474273 TRAPPC6BQ86SZ2 158 aa0.89□□□□□ -2.27
SSB-210ENST00000474273 OR8J3Q8NGG0 315 aa0.89□□□□□ -2.27
SSB-210ENST00000474273 OR4D11Q8NGI4 311 aa0.89□□□□□ -2.27
SSB-210ENST00000474273 OR9Q1Q8NGQ5 310 aa0.89□□□□□ -2.27
SSB-210ENST00000474273 OR2T10Q8NGZ9 312 aa0.89□□□□□ -2.27
SSB-210ENST00000474273 MBD3L1Q8WWY6 194 aa0.89□□□□□ -2.27
SSB-210ENST00000474273 MRPS24Q96EL2 167 aaKnown RBP0.89□□□□□ -2.27
SSB-210ENST00000474273 AIF1LQ9BQI0 150 aa0.89□□□□□ -2.27
SSB-210ENST00000474273 GINS4Q9BRT9 223 aa0.89□□□□□ -2.27
SSB-210ENST00000474273 TMEM70Q9BUB7 260 aa0.89□□□□□ -2.27
SSB-210ENST00000474273 YIPF3Q9GZM5 350 aa0.89□□□□□ -2.27
SSB-210ENST00000474273 FAM107BQ9H098 131 aa0.89□□□□□ -2.27
SSB-210ENST00000474273 CKLFQ9UBR5 152 aa0.89□□□□□ -2.27
SSB-210ENST00000474273 NAT8BQ9UHF3 227 aa0.89□□□□□ -2.27
SSB-210ENST00000474273 EPDR1Q9UM22 224 aa0.89□□□□□ -2.27
SSB-210ENST00000474273 LHFPL6Q9Y693 200 aa0.89□□□□□ -2.27
SSB-210ENST00000474273 SDK1Q7Z5N4 2213 aa0.89□□□□□ -2.27
SSB-210ENST00000474273 TET1Q8NFU7 2136 aa0.89□□□□□ -2.27
SSB-210ENST00000474273 PSME4Q14997 1843 aa0.89□□□□□ -2.27
SSB-210ENST00000474273 LAMA4Q16363 1823 aa0.89□□□□□ -2.27
SSB-210ENST00000474273 MYH10P35580 1976 aa0.88□□□□□ -2.27
SSB-210ENST00000474273 PLXNA1Q9UIW2 1896 aa0.88□□□□□ -2.27
SSB-210ENST00000474273 PAPPA2Q9BXP8 1791 aa0.88□□□□□ -2.27
SSB-210ENST00000474273 MICAL3Q7RTP6 2002 aa0.88□□□□□ -2.27
SSB-210ENST00000474273 IBTKQ9P2D0 1353 aaPredicted RBP0.88□□□□□ -2.27
SSB-210ENST00000474273 PHIPQ8WWQ0 1821 aa0.88□□□□□ -2.27
SSB-210ENST00000474273 TRAV1-1A0A0B4J248 108 aa0.88□□□□□ -2.27
SSB-210ENST00000474273 A0A0D9SFI3 127 aa0.88□□□□□ -2.27
SSB-210ENST00000474273 C9JAW5 83 aa0.88□□□□□ -2.27
SSB-210ENST00000474273 NDUFB3O43676 98 aa0.88□□□□□ -2.27
SSB-210ENST00000474273 TNFSF15O95150 251 aa0.88□□□□□ -2.27
SSB-210ENST00000474273 C1QCP02747 245 aa0.88□□□□□ -2.27
SSB-210ENST00000474273 HTR1AP08908 422 aa0.88□□□□□ -2.27
SSB-210ENST00000474273 TRGC1P0CF51 173 aa0.88□□□□□ -2.27
SSB-210ENST00000474273 COX6A1P12074 109 aa0.88□□□□□ -2.27
SSB-210ENST00000474273 HLA-EP13747 358 aa0.88□□□□□ -2.27
SSB-210ENST00000474273 CKS1BP61024 79 aa0.88□□□□□ -2.27
SSB-210ENST00000474273 PSG9Q00887 426 aa0.88□□□□□ -2.27
SSB-210ENST00000474273 PLCXD2Q0VAA5 305 aa0.88□□□□□ -2.27
SSB-210ENST00000474273 EIF3IQ13347 325 aaKnown RBP0.88□□□□□ -2.27
SSB-210ENST00000474273 SMCO1Q147U7 214 aa0.88□□□□□ -2.27
SSB-210ENST00000474273 DEFB113Q30KQ7 82 aa0.88□□□□□ -2.27
SSB-210ENST00000474273 BRMS1LQ5PSV4 323 aa0.88□□□□□ -2.27
SSB-210ENST00000474273 ZNF826PQ6ZT77 177 aa0.88□□□□□ -2.27
SSB-210ENST00000474273 AAED1Q7RTV5 226 aa0.88□□□□□ -2.27
SSB-210ENST00000474273 LRRC28Q86X40 367 aaPredicted RBP0.88□□□□□ -2.27
SSB-210ENST00000474273 C10orf126Q8N4M7 172 aa0.88□□□□□ -2.27
SSB-210ENST00000474273 TEX29Q8N6K0 151 aa0.88□□□□□ -2.27
SSB-210ENST00000474273 TMEM229BQ8NBD8 167 aa0.88□□□□□ -2.27
SSB-210ENST00000474273 SLC30A7Q8NEW0 376 aa0.88□□□□□ -2.27
SSB-210ENST00000474273 OR4X2Q8NGF9 303 aa0.88□□□□□ -2.27
SSB-210ENST00000474273 ZNF563Q8TA94 476 aa0.88□□□□□ -2.27
SSB-210ENST00000474273 SKA2Q8WVK7 121 aaPredicted RBP0.88□□□□□ -2.27
SSB-210ENST00000474273 BORCS5Q969J3 196 aa0.88□□□□□ -2.27
SSB-210ENST00000474273 NPCDR1Q9BY65 106 aa0.88□□□□□ -2.27
Retrieved 100 of 20,778 RNA–protein pairs in 77.5 ms