RNA–Protein interactions for RNA: ENST00000473373.1

CPNE1-222, Transcript of copine 1, humanhuman

TSL 2

Gene CPNE1, Length 821 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-222ENST00000473373 TMEM263Q8WUH6 116 aaKnown RBP8.22□□□□□ -1.09
CPNE1-222ENST00000473373 HYLS1Q96M11 299 aa8.22□□□□□ -1.09
CPNE1-222ENST00000473373 LINC00477Q96M19 166 aa8.22□□□□□ -1.09
CPNE1-222ENST00000473373 NOP10Q9NPE3 64 aaKnown RBP8.22□□□□□ -1.09
CPNE1-222ENST00000473373 IGKV2-40A0A087WW87 121 aaPredicted RBP8.21□□□□□ -1.1
CPNE1-222ENST00000473373 FXYD6-FXYD2A0A087WZ82 144 aa8.21□□□□□ -1.1
CPNE1-222ENST00000473373 IGKV2D-40P01614 121 aaPredicted RBP8.21□□□□□ -1.1
CPNE1-222ENST00000473373 SLC25A5P05141 298 aaKnown RBP8.21□□□□□ -1.1
CPNE1-222ENST00000473373 ATP5G1P05496 136 aa8.21□□□□□ -1.1
CPNE1-222ENST00000473373 CT45A10P0DMU9 189 aa8.21□□□□□ -1.1
CPNE1-222ENST00000473373 RNASE4P34096 147 aaKnown RBP8.21□□□□□ -1.1
CPNE1-222ENST00000473373 ATP5G3P48201 142 aa8.21□□□□□ -1.1
CPNE1-222ENST00000473373 KIR3DS1Q14943 382 aa8.21□□□□□ -1.1
CPNE1-222ENST00000473373 ZNF493Q6ZR52 646 aa8.21□□□□□ -1.1
CPNE1-222ENST00000473373 HSD17B11Q8NBQ5 300 aa8.21□□□□□ -1.1
CPNE1-222ENST00000473373 ODF3Q96PU9 254 aa8.21□□□□□ -1.1
CPNE1-222ENST00000473373 ATG101Q9BSB4 218 aa8.21□□□□□ -1.1
CPNE1-222ENST00000473373 C7orf71A4D174 169 aa8.2□□□□□ -1.1
CPNE1-222ENST00000473373 CBY3A6NI87 242 aa8.2□□□□□ -1.1
CPNE1-222ENST00000473373 RGS13O14921 159 aa8.2□□□□□ -1.1
CPNE1-222ENST00000473373 NDUFB4O95168 129 aa8.2□□□□□ -1.1
CPNE1-222ENST00000473373 M6PRP20645 277 aa8.2□□□□□ -1.1
CPNE1-222ENST00000473373 TMEM88Q6PEY1 159 aa8.2□□□□□ -1.1
CPNE1-222ENST00000473373 IQCF2Q8IXL9 164 aa8.2□□□□□ -1.1
CPNE1-222ENST00000473373 PHYHIPLQ96FC7 376 aa8.2□□□□□ -1.1
CPNE1-222ENST00000473373 FAM210BQ96KR6 192 aa8.2□□□□□ -1.1
CPNE1-222ENST00000473373 FAM167A-AS1Q96KT0 104 aa8.2□□□□□ -1.1
CPNE1-222ENST00000473373 PYGO2Q9BRQ0 406 aa8.2□□□□□ -1.1
CPNE1-222ENST00000473373 Q9H3A6 140 aa8.2□□□□□ -1.1
CPNE1-222ENST00000473373 FRAS1Q86XX4 4008 aa8.19□□□□□ -1.1
CPNE1-222ENST00000473373 NACAE9PAV3 2078 aa8.19□□□□□ -1.1
CPNE1-222ENST00000473373 BORCS7-ASMTA0A0B4J1R7 106 aa8.19□□□□□ -1.1
CPNE1-222ENST00000473373 HMGB3O15347 200 aaKnown RBP8.19□□□□□ -1.1
CPNE1-222ENST00000473373 EIF3GO75821 320 aaKnown RBP eCLIP8.19□□□□□ -1.1
CPNE1-222ENST00000473373 NUDT3O95989 172 aa8.19□□□□□ -1.1
CPNE1-222ENST00000473373 GIPP09681 153 aaPredicted RBP8.19□□□□□ -1.1
CPNE1-222ENST00000473373 RAB2AP61019 212 aa8.19□□□□□ -1.1
CPNE1-222ENST00000473373 BTN1A1Q13410 526 aa8.19□□□□□ -1.1
CPNE1-222ENST00000473373 OR10G4Q8NGN3 311 aa8.19□□□□□ -1.1
CPNE1-222ENST00000473373 OR10G9Q8NGN4 311 aa8.19□□□□□ -1.1
CPNE1-222ENST00000473373 OR10G7Q8NGN6 311 aa8.19□□□□□ -1.1
CPNE1-222ENST00000473373 ASB13Q8WXK3 278 aa8.19□□□□□ -1.1
CPNE1-222ENST00000473373 FXYD5Q96DB9 178 aa8.19□□□□□ -1.1
CPNE1-222ENST00000473373 ARPC5LQ9BPX5 153 aa8.19□□□□□ -1.1
CPNE1-222ENST00000473373 WFDC1Q9HC57 220 aa8.19□□□□□ -1.1
CPNE1-222ENST00000473373 GAGE12BA1L429 117 aa8.18□□□□□ -1.1
CPNE1-222ENST00000473373 GAGE7O76087 117 aa8.18□□□□□ -1.1
CPNE1-222ENST00000473373 GAGE12FP0CL80 117 aa8.18□□□□□ -1.1
CPNE1-222ENST00000473373 GAGE12GP0CL81 117 aa8.18□□□□□ -1.1
CPNE1-222ENST00000473373 GAGE12IP0CL82 117 aa8.18□□□□□ -1.1
CPNE1-222ENST00000473373 CDC34P49427 236 aaPredicted RBP8.18□□□□□ -1.1
CPNE1-222ENST00000473373 OR5I1Q13606 314 aa8.18□□□□□ -1.1
CPNE1-222ENST00000473373 PQLC2Q6ZP29 291 aa8.18□□□□□ -1.1
CPNE1-222ENST00000473373 C9orf47Q6ZRZ4 202 aa8.18□□□□□ -1.1
CPNE1-222ENST00000473373 LYPD1Q8N2G4 141 aa8.18□□□□□ -1.1
CPNE1-222ENST00000473373 POM121L12Q8N7R1 296 aa8.18□□□□□ -1.1
CPNE1-222ENST00000473373 C15orf53Q8NAA6 179 aa8.18□□□□□ -1.1
CPNE1-222ENST00000473373 ZNF680Q8NEM1 530 aa8.18□□□□□ -1.1
CPNE1-222ENST00000473373 OR2T35Q8NGX2 323 aa8.18□□□□□ -1.1
CPNE1-222ENST00000473373 RNASE8Q8TDE3 154 aaKnown RBP8.18□□□□□ -1.1
CPNE1-222ENST00000473373 RXFP4Q8TDU9 374 aa8.18□□□□□ -1.1
CPNE1-222ENST00000473373 VGLL1Q99990 258 aa8.18□□□□□ -1.1
CPNE1-222ENST00000473373 AGPAT4-IT1Q9H0P7 198 aa8.18□□□□□ -1.1
CPNE1-222ENST00000473373 KIAA1109Q2LD37 5005 aa8.17□□□□□ -1.1
CPNE1-222ENST00000473373 PGPA6NDG6 321 aa8.17□□□□□ -1.1
CPNE1-222ENST00000473373 M0R2N4 97 aa8.17□□□□□ -1.1
CPNE1-222ENST00000473373 MBP02144 154 aa8.17□□□□□ -1.1
CPNE1-222ENST00000473373 ZNF138P52744 262 aa8.17□□□□□ -1.1
CPNE1-222ENST00000473373 EIF4E3Q8N5X7 224 aaKnown RBP8.17□□□□□ -1.1
CPNE1-222ENST00000473373 Q8TAT8 98 aa8.17□□□□□ -1.1
CPNE1-222ENST00000473373 AQP10Q96PS8 301 aa8.17□□□□□ -1.1
CPNE1-222ENST00000473373 TRGV2A0A075B6R0 118 aa8.16□□□□□ -1.1
CPNE1-222ENST00000473373 ARL14EPLP0DKL9 152 aa8.16□□□□□ -1.1
CPNE1-222ENST00000473373 ATP6V0CP27449 155 aa8.16□□□□□ -1.1
CPNE1-222ENST00000473373 CD300CQ08708 224 aa8.16□□□□□ -1.1
CPNE1-222ENST00000473373 LINC01559Q495D7 138 aa8.16□□□□□ -1.1
CPNE1-222ENST00000473373 OTORQ9NRC9 128 aa8.16□□□□□ -1.1
CPNE1-222ENST00000473373 ZNF492Q9P255 531 aa8.16□□□□□ -1.1
CPNE1-222ENST00000473373 IGLV2-18A0A075B6J9 118 aa8.15□□□□□ -1.1
CPNE1-222ENST00000473373 TRGV1A0A0A0MS02 117 aa8.15□□□□□ -1.1
CPNE1-222ENST00000473373 PLAC8L1A1L4L8 177 aa8.15□□□□□ -1.1
CPNE1-222ENST00000473373 RBAKDNA6NC62 111 aa8.15□□□□□ -1.1
CPNE1-222ENST00000473373 GNPNAT1Q96EK6 184 aaPredicted RBP8.15□□□□□ -1.1
CPNE1-222ENST00000473373 ZNF503Q96F45 646 aa8.15□□□□□ -1.1
CPNE1-222ENST00000473373 NDFIP1Q9BT67 221 aa8.15□□□□□ -1.1
CPNE1-222ENST00000473373 PSMG3Q9BT73 122 aaPredicted RBP8.15□□□□□ -1.1
CPNE1-222ENST00000473373 ACTR3CQ9C0K3 210 aaPredicted RBP8.15□□□□□ -1.1
CPNE1-222ENST00000473373 GSN-AS1Q9NRJ2 163 aa8.15□□□□□ -1.1
CPNE1-222ENST00000473373 NAGKQ9UJ70 344 aa8.15□□□□□ -1.1
CPNE1-222ENST00000473373 DNAH10Q8IVF4 4471 aa8.14□□□□□ -1.11
CPNE1-222ENST00000473373 IGHV1OR15-1A0A075B7D0 117 aa8.14□□□□□ -1.11
CPNE1-222ENST00000473373 KLLNB2CW77 178 aa8.14□□□□□ -1.11
CPNE1-222ENST00000473373 DIRC3C9JPN6 131 aa8.14□□□□□ -1.11
CPNE1-222ENST00000473373 K7EQM0 130 aa8.14□□□□□ -1.11
CPNE1-222ENST00000473373 ARPC5O15511 151 aa8.14□□□□□ -1.11
CPNE1-222ENST00000473373 CRISP2P16562 243 aa8.14□□□□□ -1.11
CPNE1-222ENST00000473373 SERF2P84101 59 aa8.14□□□□□ -1.11
CPNE1-222ENST00000473373 ZNF415Q09FC8 603 aa8.14□□□□□ -1.11
CPNE1-222ENST00000473373 MUC21Q5SSG8 566 aa8.14□□□□□ -1.11
CPNE1-222ENST00000473373 FAM159AQ6UWV7 190 aa8.14□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 60.8 ms