RNA–Protein interactions for RNA: ENST00000473177.1

LRCH3-214, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 4

Gene LRCH3, Length 520 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-214ENST00000473177 LCN12Q6JVE5 192 aa3.88□□□□□ -1.79
LRCH3-214ENST00000473177 LINC00305Q7Z4B0 112 aa3.88□□□□□ -1.79
LRCH3-214ENST00000473177 WDR86Q86TI4 376 aa3.88□□□□□ -1.79
LRCH3-214ENST00000473177 ATOH7Q8N100 152 aa3.88□□□□□ -1.79
LRCH3-214ENST00000473177 ORMDL3Q8N138 153 aa3.88□□□□□ -1.79
LRCH3-214ENST00000473177 TEX45Q8NA69 505 aa3.88□□□□□ -1.79
LRCH3-214ENST00000473177 FAM167A-AS1Q96KT0 104 aa3.88□□□□□ -1.79
LRCH3-214ENST00000473177 AAMDCQ9H7C9 122 aa3.88□□□□□ -1.79
LRCH3-214ENST00000473177 C11orf21Q9P2W6 132 aa3.88□□□□□ -1.79
LRCH3-214ENST00000473177 HIGD1AQ9Y241 93 aa3.88□□□□□ -1.79
LRCH3-214ENST00000473177 LINC00312Q9Y6C7 94 aa3.88□□□□□ -1.79
LRCH3-214ENST00000473177 INTS1Q8N201 2190 aaKnown RBP3.87□□□□□ -1.79
LRCH3-214ENST00000473177 MUC21A0A0G2JKD1 596 aa3.87□□□□□ -1.79
LRCH3-214ENST00000473177 MUC21A0A140T8X8 626 aa3.87□□□□□ -1.79
LRCH3-214ENST00000473177 C19orf71A6NCJ1 209 aa3.87□□□□□ -1.79
LRCH3-214ENST00000473177 F2Z2F3 143 aa3.87□□□□□ -1.79
LRCH3-214ENST00000473177 LHBP01229 141 aa3.87□□□□□ -1.79
LRCH3-214ENST00000473177 IGLV1-44P01699 117 aa3.87□□□□□ -1.79
LRCH3-214ENST00000473177 HBDP02042 147 aa3.87□□□□□ -1.79
LRCH3-214ENST00000473177 APOHP02749 345 aaPredicted RBP3.87□□□□□ -1.79
LRCH3-214ENST00000473177 TCRAP04437 139 aa3.87□□□□□ -1.79
LRCH3-214ENST00000473177 SAA2P0DJI9 122 aaPredicted RBP3.87□□□□□ -1.79
LRCH3-214ENST00000473177 TMEM11P17152 192 aa3.87□□□□□ -1.79
LRCH3-214ENST00000473177 IGHV1-2P23083 117 aa3.87□□□□□ -1.79
LRCH3-214ENST00000473177 MYCNOSP40205 109 aa3.87□□□□□ -1.79
LRCH3-214ENST00000473177 RAB9AP51151 201 aa3.87□□□□□ -1.79
LRCH3-214ENST00000473177 PDE6HQ13956 83 aa3.87□□□□□ -1.79
LRCH3-214ENST00000473177 LTC4SQ16873 150 aa3.87□□□□□ -1.79
LRCH3-214ENST00000473177 RPL39P5Q59GN2 51 aa3.87□□□□□ -1.79
LRCH3-214ENST00000473177 MUC21Q5SSG8 566 aa3.87□□□□□ -1.79
LRCH3-214ENST00000473177 FAM120AOSQ5T036 256 aa3.87□□□□□ -1.79
LRCH3-214ENST00000473177 SPATA31B1PQ5VZV4 182 aa3.87□□□□□ -1.79
LRCH3-214ENST00000473177 CLEC2AQ6UVW9 174 aa3.87□□□□□ -1.79
LRCH3-214ENST00000473177 ZNF493Q6ZR52 646 aa3.87□□□□□ -1.79
LRCH3-214ENST00000473177 ZNF833PQ6ZTB9 187 aa3.87□□□□□ -1.79
LRCH3-214ENST00000473177 LINC00311Q8N616 119 aa3.87□□□□□ -1.79
LRCH3-214ENST00000473177 CD177Q8N6Q3 437 aa3.87□□□□□ -1.79
LRCH3-214ENST00000473177 TPRX1Q8N7U7 411 aa3.87□□□□□ -1.79
LRCH3-214ENST00000473177 TMEM75Q8N9X5 138 aa3.87□□□□□ -1.79
LRCH3-214ENST00000473177 TMEM116Q8NCL8 245 aa3.87□□□□□ -1.79
LRCH3-214ENST00000473177 UBALD1Q8TB05 177 aa3.87□□□□□ -1.79
LRCH3-214ENST00000473177 FXYD5Q96DB9 178 aa3.87□□□□□ -1.79
LRCH3-214ENST00000473177 ZNF414Q96IQ9 312 aa3.87□□□□□ -1.79
LRCH3-214ENST00000473177 PGLYRP4Q96LB8 373 aa3.87□□□□□ -1.79
LRCH3-214ENST00000473177 HARBI1Q96MB7 349 aa3.87□□□□□ -1.79
LRCH3-214ENST00000473177 SPANXDQ9BXN6 97 aa3.87□□□□□ -1.79
LRCH3-214ENST00000473177 SLC25A39Q9BZJ4 359 aaPredicted RBP3.87□□□□□ -1.79
LRCH3-214ENST00000473177 NXT2Q9NPJ8 142 aaKnown RBP3.87□□□□□ -1.79
LRCH3-214ENST00000473177 RPUSD1Q9UJJ7 312 aaKnown RBP3.87□□□□□ -1.79
LRCH3-214ENST00000473177 RPH3ALQ9UNE2 315 aa3.87□□□□□ -1.79
LRCH3-214ENST00000473177 PROCRQ9UNN8 238 aa3.87□□□□□ -1.79
LRCH3-214ENST00000473177 SPCS1Q9Y6A9 102 aa3.87□□□□□ -1.79
LRCH3-214ENST00000473177 MAP1AP78559 2803 aaPredicted RBP3.87□□□□□ -1.79
LRCH3-214ENST00000473177 DOCK11Q5JSL3 2073 aa3.86□□□□□ -1.79
LRCH3-214ENST00000473177 DOCK10Q96BY6 2186 aa3.86□□□□□ -1.79
LRCH3-214ENST00000473177 IGKV1D-17A0A075B6S4 117 aa3.86□□□□□ -1.79
LRCH3-214ENST00000473177 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP3.86□□□□□ -1.79
LRCH3-214ENST00000473177 A0A1W2PPM0 123 aa3.86□□□□□ -1.79
LRCH3-214ENST00000473177 OR2T8A6NH00 312 aa3.86□□□□□ -1.79
LRCH3-214ENST00000473177 SRRM4A7MD48 611 aaKnown RBP3.86□□□□□ -1.79
LRCH3-214ENST00000473177 K7EMI3 77 aa3.86□□□□□ -1.79
LRCH3-214ENST00000473177 WNT9BO14905 357 aa3.86□□□□□ -1.79
LRCH3-214ENST00000473177 MOSP00540 346 aa3.86□□□□□ -1.79
LRCH3-214ENST00000473177 ORM2P19652 201 aa3.86□□□□□ -1.79
LRCH3-214ENST00000473177 GPR6P46095 362 aaPredicted RBP3.86□□□□□ -1.79
LRCH3-214ENST00000473177 FAM27E3Q08E93 113 aa3.86□□□□□ -1.79
LRCH3-214ENST00000473177 GUSBP1Q15486 140 aa3.86□□□□□ -1.79
LRCH3-214ENST00000473177 TWIST1Q15672 202 aa3.86□□□□□ -1.79
LRCH3-214ENST00000473177 UFSP1Q6NVU6 142 aa3.86□□□□□ -1.79
LRCH3-214ENST00000473177 C1orf122Q6ZSJ8 110 aa3.86□□□□□ -1.79
LRCH3-214ENST00000473177 BHLHA15Q7RTS1 189 aaPredicted RBP3.86□□□□□ -1.79
LRCH3-214ENST00000473177 NEGR1Q7Z3B1 354 aa3.86□□□□□ -1.79
LRCH3-214ENST00000473177 VKORC1L1Q8N0U8 176 aa3.86□□□□□ -1.79
LRCH3-214ENST00000473177 C9orf106Q8NAJ2 232 aa3.86□□□□□ -1.79
LRCH3-214ENST00000473177 OR1B1Q8NGR6 318 aa3.86□□□□□ -1.79
LRCH3-214ENST00000473177 ARPC1AQ92747 370 aa3.86□□□□□ -1.79
LRCH3-214ENST00000473177 IFI27L1Q96BM0 104 aa3.86□□□□□ -1.79
LRCH3-214ENST00000473177 RAB1BQ9H0U4 201 aa3.86□□□□□ -1.79
LRCH3-214ENST00000473177 Q9H3A6 140 aa3.86□□□□□ -1.79
LRCH3-214ENST00000473177 MAP1LC3AQ9H492 121 aa3.86□□□□□ -1.79
LRCH3-214ENST00000473177 CUBNO60494 3623 aa3.86□□□□□ -1.79
LRCH3-214ENST00000473177 GTF3C1Q12789 2109 aa3.86□□□□□ -1.79
LRCH3-214ENST00000473177 AKAP6Q13023 2319 aa3.86□□□□□ -1.79
LRCH3-214ENST00000473177 IGHV4-30-2A0A087WSY4 118 aa3.85□□□□□ -1.79
LRCH3-214ENST00000473177 TRAV3A0A0B4J244 114 aa3.85□□□□□ -1.79
LRCH3-214ENST00000473177 hDV102S1A0JD36 115 aa3.85□□□□□ -1.79
LRCH3-214ENST00000473177 NCBP2LA6PVI3 153 aaKnown RBP3.85□□□□□ -1.79
LRCH3-214ENST00000473177 NDUFB3O43676 98 aa3.85□□□□□ -1.79
LRCH3-214ENST00000473177 LYZL6O75951 148 aa3.85□□□□□ -1.79
LRCH3-214ENST00000473177 PPP1R17O96001 155 aa3.85□□□□□ -1.79
LRCH3-214ENST00000473177 IGHV4-39P01824 125 aa3.85□□□□□ -1.79
LRCH3-214ENST00000473177 CLEC3BP05452 202 aa3.85□□□□□ -1.79
LRCH3-214ENST00000473177 CRYGCP07315 174 aa3.85□□□□□ -1.79
LRCH3-214ENST00000473177 CECR9P0C854 216 aa3.85□□□□□ -1.79
LRCH3-214ENST00000473177 SAA1P0DJI8 122 aaPredicted RBP3.85□□□□□ -1.79
LRCH3-214ENST00000473177 IGHV4-31P0DP07 118 aa3.85□□□□□ -1.79
LRCH3-214ENST00000473177 DEFA4P12838 97 aa3.85□□□□□ -1.79
LRCH3-214ENST00000473177 SLC25A16P16260 332 aa3.85□□□□□ -1.79
LRCH3-214ENST00000473177 CEBPDP49716 269 aaPredicted RBP3.85□□□□□ -1.79
LRCH3-214ENST00000473177 RPL24P83731 157 aaKnown RBP3.85□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 61.9 ms