RNA–Protein interactions for RNA: ENST00000473036.2

TPM3-216, Transcript of tropomyosin 3, humanhuman

TSL 2

Gene TPM3, Length 746 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-216ENST00000473036 AMTNQ6UX39 209 aa9.53□□□□□ -0.88
TPM3-216ENST00000473036 MRPL53Q96EL3 112 aaKnown RBP9.53□□□□□ -0.88
TPM3-216ENST00000473036 SLC35B3Q9H1N7 401 aa9.53□□□□□ -0.88
TPM3-216ENST00000473036 OTORQ9NRC9 128 aa9.53□□□□□ -0.88
TPM3-216ENST00000473036 MED9Q9NWA0 146 aa9.53□□□□□ -0.88
TPM3-216ENST00000473036 VAX2Q9UIW0 290 aa9.53□□□□□ -0.88
TPM3-216ENST00000473036 SERTM2A0A1B0GWG4 89 aa9.52□□□□□ -0.89
TPM3-216ENST00000473036 K7EQM0 130 aa9.52□□□□□ -0.89
TPM3-216ENST00000473036 FGF8P55075 233 aaPredicted RBP9.52□□□□□ -0.89
TPM3-216ENST00000473036 PSG3Q16557 428 aa9.52□□□□□ -0.89
TPM3-216ENST00000473036 SSX7Q7RTT5 188 aa9.52□□□□□ -0.89
TPM3-216ENST00000473036 CMTM2Q8TAZ6 248 aa9.52□□□□□ -0.89
TPM3-216ENST00000473036 BLNKQ8WV28 456 aa9.52□□□□□ -0.89
TPM3-216ENST00000473036 RPUSD4Q96CM3 377 aaKnown RBP9.52□□□□□ -0.89
TPM3-216ENST00000473036 GNG13Q9P2W3 67 aa9.52□□□□□ -0.89
TPM3-216ENST00000473036 RAB19A4D1S5 217 aa9.51□□□□□ -0.89
TPM3-216ENST00000473036 RBFOX3A6NFN3 312 aa9.51□□□□□ -0.89
TPM3-216ENST00000473036 FBLL1A6NHQ2 334 aaKnown RBP9.51□□□□□ -0.89
TPM3-216ENST00000473036 PDE6DO43924 150 aa9.51□□□□□ -0.89
TPM3-216ENST00000473036 CNN1P51911 297 aaKnown RBP9.51□□□□□ -0.89
TPM3-216ENST00000473036 RANP62826 216 aaKnown RBP9.51□□□□□ -0.89
TPM3-216ENST00000473036 PEA15Q15121 130 aa9.51□□□□□ -0.89
TPM3-216ENST00000473036 NDUFA5Q16718 116 aa9.51□□□□□ -0.89
TPM3-216ENST00000473036 MORN3Q6PF18 240 aaPredicted RBP9.51□□□□□ -0.89
TPM3-216ENST00000473036 HIST1H2BAQ96A08 127 aa9.51□□□□□ -0.89
TPM3-216ENST00000473036 CLUHP3Q96NS8 147 aa9.51□□□□□ -0.89
TPM3-216ENST00000473036 EIF5A2Q9GZV4 153 aaKnown RBP9.51□□□□□ -0.89
TPM3-216ENST00000473036 XCL2Q9UBD3 114 aa9.51□□□□□ -0.89
TPM3-216ENST00000473036 A0A0J9YWU9 116 aa9.5□□□□□ -0.89
TPM3-216ENST00000473036 M0R3E3 92 aa9.5□□□□□ -0.89
TPM3-216ENST00000473036 S100A9P06702 114 aaKnown RBP9.5□□□□□ -0.89
TPM3-216ENST00000473036 BCL2P10415 239 aa9.5□□□□□ -0.89
TPM3-216ENST00000473036 CST9LP1Q5W188 147 aa9.5□□□□□ -0.89
TPM3-216ENST00000473036 C5orf17Q8NAS9 161 aa9.5□□□□□ -0.89
TPM3-216ENST00000473036 ZNF738Q8NE65 137 aa9.5□□□□□ -0.89
TPM3-216ENST00000473036 OR4B1Q8NGF8 309 aa9.5□□□□□ -0.89
TPM3-216ENST00000473036 OR8A1Q8NGG7 326 aa9.5□□□□□ -0.89
TPM3-216ENST00000473036 OR11H2Q8NH07 326 aa9.5□□□□□ -0.89
TPM3-216ENST00000473036 FAM210AQ96ND0 272 aa9.5□□□□□ -0.89
TPM3-216ENST00000473036 X6R8D5 127 aa9.5□□□□□ -0.89
TPM3-216ENST00000473036 DNAH2Q9P225 4427 aa9.49□□□□□ -0.89
TPM3-216ENST00000473036 PGPA6NDG6 321 aa9.49□□□□□ -0.89
TPM3-216ENST00000473036 FAM74A7A6NL05 159 aa9.49□□□□□ -0.89
TPM3-216ENST00000473036 CRXO43186 299 aaPredicted RBP9.49□□□□□ -0.89
TPM3-216ENST00000473036 PAGE4O60829 102 aa9.49□□□□□ -0.89
TPM3-216ENST00000473036 SUMO1P63165 101 aaKnown RBP9.49□□□□□ -0.89
TPM3-216ENST00000473036 CCL20P78556 96 aa9.49□□□□□ -0.89
TPM3-216ENST00000473036 MEF2BQ02080 365 aaPredicted RBP9.49□□□□□ -0.89
TPM3-216ENST00000473036 EBLN2Q6P2I7 272 aa9.49□□□□□ -0.89
TPM3-216ENST00000473036 UQCC3Q6UW78 93 aa9.49□□□□□ -0.89
TPM3-216ENST00000473036 EXOC3-AS1Q8N2X6 119 aa9.49□□□□□ -0.89
TPM3-216ENST00000473036 Q8NAQ8 132 aa9.49□□□□□ -0.89
TPM3-216ENST00000473036 Q9H3A6 140 aa9.49□□□□□ -0.89
TPM3-216ENST00000473036 TMPRSS5Q9H3S3 457 aa9.49□□□□□ -0.89
TPM3-216ENST00000473036 DNAH10Q8IVF4 4471 aa9.48□□□□□ -0.89
TPM3-216ENST00000473036 A0A1B0GV50 99 aa9.48□□□□□ -0.89
TPM3-216ENST00000473036 C11orf94C9JXX5 98 aa9.48□□□□□ -0.89
TPM3-216ENST00000473036 DEFB4AO15263 64 aa9.48□□□□□ -0.89
TPM3-216ENST00000473036 RBMY1A1P0DJD3 496 aaKnown RBP9.48□□□□□ -0.89
TPM3-216ENST00000473036 RBMY1CP0DJD4 496 aa9.48□□□□□ -0.89
TPM3-216ENST00000473036 KIR3DS1Q14943 382 aa9.48□□□□□ -0.89
TPM3-216ENST00000473036 RBMY1FQ15415 496 aaKnown RBP9.48□□□□□ -0.89
TPM3-216ENST00000473036 ZNF506Q5JVG8 444 aa9.48□□□□□ -0.89
TPM3-216ENST00000473036 C1orf158Q8N1D5 194 aa9.48□□□□□ -0.89
TPM3-216ENST00000473036 RARRES2Q99969 163 aa9.48□□□□□ -0.89
TPM3-216ENST00000473036 RBAKDNA6NC62 111 aa9.47□□□□□ -0.89
TPM3-216ENST00000473036 LINC00862A6NCI5 91 aa9.47□□□□□ -0.89
TPM3-216ENST00000473036 TMEM250H0YL14 139 aa9.47□□□□□ -0.89
TPM3-216ENST00000473036 M0R2Z0 102 aa9.47□□□□□ -0.89
TPM3-216ENST00000473036 DUSP14O95147 198 aaKnown RBP9.47□□□□□ -0.89
TPM3-216ENST00000473036 SLC25A5P05141 298 aaKnown RBP9.47□□□□□ -0.89
TPM3-216ENST00000473036 UBE2G2P60604 165 aa9.47□□□□□ -0.89
TPM3-216ENST00000473036 HIST1H1AQ02539 215 aaPredicted RBP9.47□□□□□ -0.89
TPM3-216ENST00000473036 ICAM4Q14773 271 aa9.47□□□□□ -0.89
TPM3-216ENST00000473036 ZNF705AQ6ZN79 300 aaPredicted RBP9.47□□□□□ -0.89
TPM3-216ENST00000473036 EPDR1Q9UM22 224 aa9.47□□□□□ -0.89
TPM3-216ENST00000473036 LOC102723971A0A1B0GUV8 181 aa9.46□□□□□ -0.9
TPM3-216ENST00000473036 PRM2P04554 102 aa9.46□□□□□ -0.9
TPM3-216ENST00000473036 SPINK13Q1W4C9 94 aa9.46□□□□□ -0.9
TPM3-216ENST00000473036 CCDC28AQ8IWP9 274 aa9.46□□□□□ -0.9
TPM3-216ENST00000473036 EIF4E3Q8N5X7 224 aaKnown RBP9.46□□□□□ -0.9
TPM3-216ENST00000473036 OR10J6PQ8NGY7 276 aa9.46□□□□□ -0.9
TPM3-216ENST00000473036 ATG101Q9BSB4 218 aa9.46□□□□□ -0.9
TPM3-216ENST00000473036 KRTAP17-1Q9BYP8 105 aa9.46□□□□□ -0.9
TPM3-216ENST00000473036 TRAV12-2A0A075B6T6 113 aa9.45□□□□□ -0.9
TPM3-216ENST00000473036 IGHV4-28A0A0C4DH34 117 aa9.45□□□□□ -0.9
TPM3-216ENST00000473036 CT45A10P0DMU9 189 aa9.45□□□□□ -0.9
TPM3-216ENST00000473036 ERCC8Q13216 396 aa9.45□□□□□ -0.9
TPM3-216ENST00000473036 CYB561D1Q8N8Q1 229 aa9.45□□□□□ -0.9
TPM3-216ENST00000473036 LINC00477Q96M19 166 aa9.45□□□□□ -0.9
TPM3-216ENST00000473036 YTHDF2Q9Y5A9 579 aaKnown RBP9.45□□□□□ -0.9
TPM3-216ENST00000473036 FRAS1Q86XX4 4008 aa9.45□□□□□ -0.9
TPM3-216ENST00000473036 GGTLC3B5MD39 225 aa9.44□□□□□ -0.9
TPM3-216ENST00000473036 TCRAP04437 139 aa9.44□□□□□ -0.9
TPM3-216ENST00000473036 NUTF2P61970 127 aaKnown RBP9.44□□□□□ -0.9
TPM3-216ENST00000473036 FAM74A3Q4VXF1 159 aa9.44□□□□□ -0.9
TPM3-216ENST00000473036 TOR2AQ5JU69 321 aa9.44□□□□□ -0.9
TPM3-216ENST00000473036 TMEM78Q5T7P6 136 aa9.44□□□□□ -0.9
TPM3-216ENST00000473036 FMC1Q96HJ9 113 aa9.44□□□□□ -0.9
TPM3-216ENST00000473036 C11orf68Q9H3H3 251 aaKnown RBP9.44□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 72 ms