RNA–Protein interactions for RNA: ENST00000472217.1

USF1-204, Transcript of upstream transcription factor 1, humanhuman

TSL 2

Gene USF1, Length 1,097 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-204ENST00000472217 KLLNB2CW77 178 aa6.31□□□□□ -1.4
USF1-204ENST00000472217 SSNA1O43805 119 aa6.31□□□□□ -1.4
USF1-204ENST00000472217 GAGE7O76087 117 aa6.31□□□□□ -1.4
USF1-204ENST00000472217 MPC2O95563 127 aa6.31□□□□□ -1.4
USF1-204ENST00000472217 OR10J4P0C629 311 aa6.31□□□□□ -1.4
USF1-204ENST00000472217 NBEAP1P0C6P0 100 aa6.31□□□□□ -1.4
USF1-204ENST00000472217 GAGE12FP0CL80 117 aa6.31□□□□□ -1.4
USF1-204ENST00000472217 GAGE12GP0CL81 117 aa6.31□□□□□ -1.4
USF1-204ENST00000472217 GAGE12IP0CL82 117 aa6.31□□□□□ -1.4
USF1-204ENST00000472217 FAM3BP58499 235 aaPredicted RBP6.31□□□□□ -1.4
USF1-204ENST00000472217 DEFA1P59665 94 aa6.31□□□□□ -1.4
USF1-204ENST00000472217 DEFA3P59666 94 aa6.31□□□□□ -1.4
USF1-204ENST00000472217 C4orf48Q5BLP8 95 aa6.31□□□□□ -1.4
USF1-204ENST00000472217 FAM122CQ6P4D5 195 aa6.31□□□□□ -1.4
USF1-204ENST00000472217 C9orf47Q6ZRZ4 202 aa6.31□□□□□ -1.4
USF1-204ENST00000472217 RNF141Q8WVD5 230 aa6.31□□□□□ -1.4
USF1-204ENST00000472217 LINC00477Q96M19 166 aa6.31□□□□□ -1.4
USF1-204ENST00000472217 ATP5SQ99766 215 aa6.31□□□□□ -1.4
USF1-204ENST00000472217 MRPL32Q9BYC8 188 aaKnown RBP6.31□□□□□ -1.4
USF1-204ENST00000472217 OR51M1Q9H341 326 aa6.31□□□□□ -1.4
USF1-204ENST00000472217 FUT9Q9Y231 359 aa6.31□□□□□ -1.4
USF1-204ENST00000472217 HSPB11Q9Y547 144 aa6.31□□□□□ -1.4
USF1-204ENST00000472217 C17orf112F2Z3M2 114 aa6.3□□□□□ -1.4
USF1-204ENST00000472217 OR7C2O60412 319 aa6.3□□□□□ -1.4
USF1-204ENST00000472217 PET100P0DJ07 73 aa6.3□□□□□ -1.4
USF1-204ENST00000472217 CRISP2P16562 243 aa6.3□□□□□ -1.4
USF1-204ENST00000472217 HOXA5P20719 270 aa6.3□□□□□ -1.4
USF1-204ENST00000472217 CD300CQ08708 224 aa6.3□□□□□ -1.4
USF1-204ENST00000472217 BTN1A1Q13410 526 aa6.3□□□□□ -1.4
USF1-204ENST00000472217 OR5I1Q13606 314 aa6.3□□□□□ -1.4
USF1-204ENST00000472217 PRR9Q5T870 116 aa6.3□□□□□ -1.4
USF1-204ENST00000472217 Q6ZTI0 123 aa6.3□□□□□ -1.4
USF1-204ENST00000472217 ZNRF2Q8NHG8 242 aa6.3□□□□□ -1.4
USF1-204ENST00000472217 FXYD5Q96DB9 178 aa6.3□□□□□ -1.4
USF1-204ENST00000472217 ZNF503Q96F45 646 aa6.3□□□□□ -1.4
USF1-204ENST00000472217 PHYHIPLQ96FC7 376 aa6.3□□□□□ -1.4
USF1-204ENST00000472217 VGLL1Q99990 258 aa6.3□□□□□ -1.4
USF1-204ENST00000472217 PAXXQ9BUH6 204 aa6.3□□□□□ -1.4
USF1-204ENST00000472217 GSN-AS1Q9NRJ2 163 aa6.3□□□□□ -1.4
USF1-204ENST00000472217 DNAH10Q8IVF4 4471 aa6.3□□□□□ -1.4
USF1-204ENST00000472217 DNAH6Q9C0G6 4158 aa6.29□□□□□ -1.4
USF1-204ENST00000472217 TRAV26-1A0A087WT03 109 aa6.29□□□□□ -1.4
USF1-204ENST00000472217 ZNF324O75467 553 aaPredicted RBP6.29□□□□□ -1.4
USF1-204ENST00000472217 GPX1P07203 203 aa6.29□□□□□ -1.4
USF1-204ENST00000472217 M6PRP20645 277 aa6.29□□□□□ -1.4
USF1-204ENST00000472217 RPL12P30050 165 aaKnown RBP6.29□□□□□ -1.4
USF1-204ENST00000472217 RNASE4P34096 147 aaKnown RBP6.29□□□□□ -1.4
USF1-204ENST00000472217 CCL18P55774 89 aa6.29□□□□□ -1.4
USF1-204ENST00000472217 DAZ2Q13117 558 aaKnown RBP6.29□□□□□ -1.4
USF1-204ENST00000472217 FFAR4Q5NUL3 377 aa6.29□□□□□ -1.4
USF1-204ENST00000472217 TMEM78Q5T7P6 136 aa6.29□□□□□ -1.4
USF1-204ENST00000472217 C1orf134Q5TEV5 83 aa6.29□□□□□ -1.4
USF1-204ENST00000472217 EIF4E3Q8N5X7 224 aaKnown RBP6.29□□□□□ -1.4
USF1-204ENST00000472217 ZFAND2AQ8N6M9 145 aa6.29□□□□□ -1.4
USF1-204ENST00000472217 C11orf72Q8NBR9 251 aa6.29□□□□□ -1.4
USF1-204ENST00000472217 ZNF680Q8NEM1 530 aa6.29□□□□□ -1.4
USF1-204ENST00000472217 GNPNAT1Q96EK6 184 aaPredicted RBP6.29□□□□□ -1.4
USF1-204ENST00000472217 LINC00467Q9BRT7 94 aa6.29□□□□□ -1.4
USF1-204ENST00000472217 SMIM3Q9BZL3 60 aa6.29□□□□□ -1.4
USF1-204ENST00000472217 TMPRSS5Q9H3S3 457 aa6.29□□□□□ -1.4
USF1-204ENST00000472217 MBD2Q9UBB5 411 aa6.29□□□□□ -1.4
USF1-204ENST00000472217 LINC00588Q9Y4M8 146 aa6.29□□□□□ -1.4
USF1-204ENST00000472217 HECTD4Q9Y4D8 3996 aa6.29□□□□□ -1.4
USF1-204ENST00000472217 A0A0J9YY99 117 aa6.28□□□□□ -1.4
USF1-204ENST00000472217 IFNA5P01569 189 aa6.28□□□□□ -1.4
USF1-204ENST00000472217 NMBP08949 121 aa6.28□□□□□ -1.4
USF1-204ENST00000472217 RANP62826 216 aaKnown RBP6.28□□□□□ -1.4
USF1-204ENST00000472217 UBE2L3P68036 154 aaKnown RBP6.28□□□□□ -1.4
USF1-204ENST00000472217 ANXA2RQ3ZCQ2 193 aa6.28□□□□□ -1.4
USF1-204ENST00000472217 SOHLH1Q5JUK2 328 aa6.28□□□□□ -1.4
USF1-204ENST00000472217 Q6ZQT7 251 aa6.28□□□□□ -1.4
USF1-204ENST00000472217 SSX7Q7RTT5 188 aa6.28□□□□□ -1.4
USF1-204ENST00000472217 Q8TAT8 98 aa6.28□□□□□ -1.4
USF1-204ENST00000472217 RXFP4Q8TDU9 374 aa6.28□□□□□ -1.4
USF1-204ENST00000472217 WFDC1Q9HC57 220 aa6.28□□□□□ -1.4
USF1-204ENST00000472217 ZNF492Q9P255 531 aa6.28□□□□□ -1.4
USF1-204ENST00000472217 KLF12Q9Y4X4 402 aa6.28□□□□□ -1.4
USF1-204ENST00000472217 NBDYA0A0U1RRE5 68 aa6.27□□□□□ -1.41
USF1-204ENST00000472217 EIF3GO75821 320 aaKnown RBP eCLIP6.27□□□□□ -1.41
USF1-204ENST00000472217 ZNF138P52744 262 aa6.27□□□□□ -1.41
USF1-204ENST00000472217 TCL1AP56279 114 aa6.27□□□□□ -1.41
USF1-204ENST00000472217 KHDC3LQ587J8 217 aa6.27□□□□□ -1.41
USF1-204ENST00000472217 IBA57Q5T440 356 aaKnown RBP6.27□□□□□ -1.41
USF1-204ENST00000472217 LYPD1Q8N2G4 141 aa6.27□□□□□ -1.41
USF1-204ENST00000472217 SCGB1C1Q8TD33 95 aa6.27□□□□□ -1.41
USF1-204ENST00000472217 Q9H3A6 140 aa6.27□□□□□ -1.41
USF1-204ENST00000472217 BATF3Q9NR55 127 aa6.27□□□□□ -1.41
USF1-204ENST00000472217 TP53TG3Q9ULZ0 132 aa6.27□□□□□ -1.41
USF1-204ENST00000472217 ALG5Q9Y673 324 aa6.27□□□□□ -1.41
USF1-204ENST00000472217 TRGV2A0A075B6R0 118 aa6.26□□□□□ -1.41
USF1-204ENST00000472217 IGHV1OR15-1A0A075B7D0 117 aa6.26□□□□□ -1.41
USF1-204ENST00000472217 TRGV1A0A0A0MS02 117 aa6.26□□□□□ -1.41
USF1-204ENST00000472217 TRBV7-9A0A0J9YWB2 115 aa6.26□□□□□ -1.41
USF1-204ENST00000472217 RBAKDNA6NC62 111 aa6.26□□□□□ -1.41
USF1-204ENST00000472217 H3BNG1 76 aa6.26□□□□□ -1.41
USF1-204ENST00000472217 RGS13O14921 159 aa6.26□□□□□ -1.41
USF1-204ENST00000472217 SPINK4O60575 86 aa6.26□□□□□ -1.41
USF1-204ENST00000472217 CSN1S1P47710 185 aa6.26□□□□□ -1.41
USF1-204ENST00000472217 TAS2R45P59539 299 aa6.26□□□□□ -1.41
USF1-204ENST00000472217 C18orf15Q96N68 181 aa6.26□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 462.1 ms