RNA–Protein interactions for RNA: ENST00000471567.1

SDC3-203, Transcript of syndecan 3, humanhuman

TSL 3

Gene SDC3, Length 589 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC3-203ENST00000471567 IGKV2-40A0A087WW87 121 aaPredicted RBP11□□□□□ -0.65
SDC3-203ENST00000471567 TRBV7-9A0A0J9YWB2 115 aa11□□□□□ -0.65
SDC3-203ENST00000471567 IGKV2D-40P01614 121 aaPredicted RBP11□□□□□ -0.65
SDC3-203ENST00000471567 NMBP08949 121 aa11□□□□□ -0.65
SDC3-203ENST00000471567 ZNF726P1Q15940 193 aa11□□□□□ -0.65
SDC3-203ENST00000471567 SSX7Q7RTT5 188 aa11□□□□□ -0.65
SDC3-203ENST00000471567 CMTM2Q8TAZ6 248 aa11□□□□□ -0.65
SDC3-203ENST00000471567 FAM19A4Q96LR4 140 aa11□□□□□ -0.65
SDC3-203ENST00000471567 CXorf65A6NEN9 183 aa10.99□□□□□ -0.65
SDC3-203ENST00000471567 UMAD1C9J7I0 102 aa10.99□□□□□ -0.65
SDC3-203ENST00000471567 DIRC3C9JPN6 131 aa10.99□□□□□ -0.65
SDC3-203ENST00000471567 TPT1P13693 172 aaKnown RBP10.99□□□□□ -0.65
SDC3-203ENST00000471567 CRISP2P16562 243 aa10.99□□□□□ -0.65
SDC3-203ENST00000471567 TAS2R60P59551 318 aa10.99□□□□□ -0.65
SDC3-203ENST00000471567 LGALSLQ3ZCW2 172 aaPredicted RBP10.99□□□□□ -0.65
SDC3-203ENST00000471567 GFI1BQ5VTD9 330 aa10.99□□□□□ -0.65
SDC3-203ENST00000471567 STOML3Q8TAV4 291 aa10.99□□□□□ -0.65
SDC3-203ENST00000471567 LINC01587Q99440 93 aa10.99□□□□□ -0.65
SDC3-203ENST00000471567 VGLL1Q99990 258 aa10.99□□□□□ -0.65
SDC3-203ENST00000471567 ZNF492Q9P255 531 aa10.99□□□□□ -0.65
SDC3-203ENST00000471567 TEX48A0A1B0GUV7 120 aa10.98□□□□□ -0.65
SDC3-203ENST00000471567 LOC102723971A0A1B0GUV8 181 aa10.98□□□□□ -0.65
SDC3-203ENST00000471567 NUPR2A6NF83 97 aa10.98□□□□□ -0.65
SDC3-203ENST00000471567 KLLNB2CW77 178 aa10.98□□□□□ -0.65
SDC3-203ENST00000471567 H7BYZ3 331 aa10.98□□□□□ -0.65
SDC3-203ENST00000471567 ZNF138P52744 262 aa10.98□□□□□ -0.65
SDC3-203ENST00000471567 NANOS2P60321 138 aaKnown RBP10.98□□□□□ -0.65
SDC3-203ENST00000471567 PMS2P11Q13670 270 aa10.98□□□□□ -0.65
SDC3-203ENST00000471567 KIR3DS1Q14943 382 aa10.98□□□□□ -0.65
SDC3-203ENST00000471567 ZNF705GA8MUZ8 300 aaPredicted RBP10.97□□□□□ -0.65
SDC3-203ENST00000471567 SPART-AS1P0CW21 52 aa10.97□□□□□ -0.65
SDC3-203ENST00000471567 CEMP1Q6PRD7 247 aaPredicted RBP10.97□□□□□ -0.65
SDC3-203ENST00000471567 DPPA3Q6W0C5 159 aa10.97□□□□□ -0.65
SDC3-203ENST00000471567 TMED6Q8WW62 240 aa10.97□□□□□ -0.65
SDC3-203ENST00000471567 PLA2G2EQ9NZK7 142 aa10.97□□□□□ -0.65
SDC3-203ENST00000471567 LENEPQ9Y5L5 61 aa10.97□□□□□ -0.65
SDC3-203ENST00000471567 SERTM2A0A1B0GWG4 89 aa10.96□□□□□ -0.65
SDC3-203ENST00000471567 A0A1W2PRE2 83 aa10.96□□□□□ -0.65
SDC3-203ENST00000471567 C7orf71A4D174 169 aa10.96□□□□□ -0.65
SDC3-203ENST00000471567 MAP1LC3B2A6NCE7 125 aa10.96□□□□□ -0.65
SDC3-203ENST00000471567 EIF5AL1Q6IS14 154 aaKnown RBP10.96□□□□□ -0.65
SDC3-203ENST00000471567 IQCF2Q8IXL9 164 aa10.96□□□□□ -0.65
SDC3-203ENST00000471567 ZFAND2AQ8N6M9 145 aa10.96□□□□□ -0.65
SDC3-203ENST00000471567 C5orf17Q8NAS9 161 aa10.96□□□□□ -0.65
SDC3-203ENST00000471567 PHLDA1Q8WV24 401 aaPredicted RBP10.96□□□□□ -0.65
SDC3-203ENST00000471567 NIPSNAP3BQ9BS92 247 aa10.96□□□□□ -0.65
SDC3-203ENST00000471567 MAP1LC3BQ9GZQ8 125 aa10.96□□□□□ -0.65
SDC3-203ENST00000471567 TRAV12-3A0A0B4J271 114 aa10.95□□□□□ -0.66
SDC3-203ENST00000471567 C11orf94C9JXX5 98 aa10.95□□□□□ -0.66
SDC3-203ENST00000471567 J3KRW8 73 aa10.95□□□□□ -0.66
SDC3-203ENST00000471567 GPX1P07203 203 aa10.95□□□□□ -0.66
SDC3-203ENST00000471567 EMP1P54849 157 aa10.95□□□□□ -0.66
SDC3-203ENST00000471567 SUMO1P63165 101 aaKnown RBP10.95□□□□□ -0.66
SDC3-203ENST00000471567 ZNF493Q6ZR52 646 aa10.95□□□□□ -0.66
SDC3-203ENST00000471567 GOLT1AQ6ZVE7 132 aa10.95□□□□□ -0.66
SDC3-203ENST00000471567 MBD3L1Q8WWY6 194 aa10.95□□□□□ -0.66
SDC3-203ENST00000471567 NKX6-2Q9C056 277 aaPredicted RBP10.95□□□□□ -0.66
SDC3-203ENST00000471567 DKK2Q9UBU2 259 aa10.95□□□□□ -0.66
SDC3-203ENST00000471567 CELA1Q9UNI1 258 aa10.95□□□□□ -0.66
SDC3-203ENST00000471567 KLK5Q9Y337 293 aaPredicted RBP10.95□□□□□ -0.66
SDC3-203ENST00000471567 YTHDF2Q9Y5A9 579 aaKnown RBP10.95□□□□□ -0.66
SDC3-203ENST00000471567 ZNF324O75467 553 aaPredicted RBP10.94□□□□□ -0.66
SDC3-203ENST00000471567 RNASE4P34096 147 aaKnown RBP10.94□□□□□ -0.66
SDC3-203ENST00000471567 FHITP49789 147 aa10.94□□□□□ -0.66
SDC3-203ENST00000471567 FGF8P55075 233 aaPredicted RBP10.94□□□□□ -0.66
SDC3-203ENST00000471567 C12orf74Q32Q52 190 aa10.94□□□□□ -0.66
SDC3-203ENST00000471567 SLC51BQ86UW2 128 aa10.94□□□□□ -0.66
SDC3-203ENST00000471567 C16orf74Q96GX8 76 aa10.94□□□□□ -0.66
SDC3-203ENST00000471567 PYGO2Q9BRQ0 406 aa10.94□□□□□ -0.66
SDC3-203ENST00000471567 TMPRSS5Q9H3S3 457 aa10.94□□□□□ -0.66
SDC3-203ENST00000471567 RPH3ALQ9UNE2 315 aa10.94□□□□□ -0.66
SDC3-203ENST00000471567 GGTLC3B5MD39 225 aa10.93□□□□□ -0.66
SDC3-203ENST00000471567 K7EQM0 130 aa10.93□□□□□ -0.66
SDC3-203ENST00000471567 TCRAP04437 139 aa10.93□□□□□ -0.66
SDC3-203ENST00000471567 PRM2P04554 102 aa10.93□□□□□ -0.66
SDC3-203ENST00000471567 AZU1P20160 251 aa10.93□□□□□ -0.66
SDC3-203ENST00000471567 RAB5CP51148 216 aa10.93□□□□□ -0.66
SDC3-203ENST00000471567 GNG5P63218 68 aa10.93□□□□□ -0.66
SDC3-203ENST00000471567 CD300CQ08708 224 aa10.93□□□□□ -0.66
SDC3-203ENST00000471567 ZFP69Q49AA0 526 aa10.93□□□□□ -0.66
SDC3-203ENST00000471567 FAM222AQ5U5X8 452 aa10.93□□□□□ -0.66
SDC3-203ENST00000471567 CCDC28AQ8IWP9 274 aa10.93□□□□□ -0.66
SDC3-203ENST00000471567 Q8TAT8 98 aa10.93□□□□□ -0.66
SDC3-203ENST00000471567 FAM213BQ8TBF2 198 aa10.93□□□□□ -0.66
SDC3-203ENST00000471567 TMEM263Q8WUH6 116 aaKnown RBP10.93□□□□□ -0.66
SDC3-203ENST00000471567 LINC00467Q9BRT7 94 aa10.93□□□□□ -0.66
SDC3-203ENST00000471567 EPDR1Q9UM22 224 aa10.93□□□□□ -0.66
SDC3-203ENST00000471567 CSMD3Q7Z407 3707 aa10.93□□□□□ -0.66
SDC3-203ENST00000471567 TRAV10A0A0B4J240 114 aa10.92□□□□□ -0.66
SDC3-203ENST00000471567 PLAC8L1A1L4L8 177 aa10.92□□□□□ -0.66
SDC3-203ENST00000471567 LYRM9A8MSI8 78 aa10.92□□□□□ -0.66
SDC3-203ENST00000471567 HTN1P15515 57 aa10.92□□□□□ -0.66
SDC3-203ENST00000471567 BTN1A1Q13410 526 aa10.92□□□□□ -0.66
SDC3-203ENST00000471567 Q6ZTC4 211 aa10.92□□□□□ -0.66
SDC3-203ENST00000471567 C9orf62Q8N4C0 152 aa10.92□□□□□ -0.66
SDC3-203ENST00000471567 RNASE8Q8TDE3 154 aaKnown RBP10.92□□□□□ -0.66
SDC3-203ENST00000471567 SFT2D1Q8WV19 159 aa10.92□□□□□ -0.66
SDC3-203ENST00000471567 FBLL1A6NHQ2 334 aaKnown RBP10.91□□□□□ -0.66
SDC3-203ENST00000471567 FAM74A7A6NL05 159 aa10.91□□□□□ -0.66
SDC3-203ENST00000471567 ATG101Q9BSB4 218 aa10.91□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 62 ms