RNA–Protein interactions for RNA: ENST00000470763.1

NPHP4-207, Transcript of nephrocystin 4, humanhuman

TSL 2

Gene NPHP4, Length 3,156 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-207ENST00000470763 TM2D2Q9BX73 214 aa10.81□□□□□ -0.68
NPHP4-207ENST00000470763 PLSCR4Q9NRQ2 329 aa10.81□□□□□ -0.68
NPHP4-207ENST00000470763 S4R3C0 116 aa10.81□□□□□ -0.68
NPHP4-207ENST00000470763 TRBV6-1A0A0K0K1D8 114 aa10.8□□□□□ -0.68
NPHP4-207ENST00000470763 GATA1P15976 413 aaPredicted RBP10.8□□□□□ -0.68
NPHP4-207ENST00000470763 TMEM30BQ3MIR4 351 aa10.8□□□□□ -0.68
NPHP4-207ENST00000470763 TRAV40A0A0B4J280 105 aa10.8□□□□□ -0.68
NPHP4-207ENST00000470763 IGKV1-17P01599 117 aa10.8□□□□□ -0.68
NPHP4-207ENST00000470763 C12orf74Q32Q52 190 aa10.8□□□□□ -0.68
NPHP4-207ENST00000470763 IGKV2-40A0A087WW87 121 aaPredicted RBP10.79□□□□□ -0.68
NPHP4-207ENST00000470763 IGKV2D-40P01614 121 aaPredicted RBP10.79□□□□□ -0.68
NPHP4-207ENST00000470763 Q8TAT8 98 aa10.79□□□□□ -0.68
NPHP4-207ENST00000470763 MAP1LC3AQ9H492 121 aa10.79□□□□□ -0.68
NPHP4-207ENST00000470763 A0A1B0GWB2 263 aa10.79□□□□□ -0.68
NPHP4-207ENST00000470763 FAM169BQ8N8A8 192 aa10.79□□□□□ -0.68
NPHP4-207ENST00000470763 GEMIN7Q9H840 131 aaKnown RBP10.79□□□□□ -0.68
NPHP4-207ENST00000470763 ZMAT4Q9H898 229 aa10.79□□□□□ -0.68
NPHP4-207ENST00000470763 ADGRG4Q8IZF6 3080 aa10.79□□□□□ -0.68
NPHP4-207ENST00000470763 IGLV3-9A0A075B6K5 115 aa10.79□□□□□ -0.68
NPHP4-207ENST00000470763 EGR2P11161 476 aaPredicted RBP10.79□□□□□ -0.68
NPHP4-207ENST00000470763 SRSF6Q13247 344 aaKnown RBP10.79□□□□□ -0.68
NPHP4-207ENST00000470763 HELZ2Q9BYK8 2649 aaKnown RBP10.78□□□□□ -0.68
NPHP4-207ENST00000470763 KLF17Q5JT82 389 aaPredicted RBP10.78□□□□□ -0.68
NPHP4-207ENST00000470763 TMEM158Q8WZ71 300 aa10.78□□□□□ -0.68
NPHP4-207ENST00000470763 SHANK2-AS3Q9BTD1 123 aa10.78□□□□□ -0.68
NPHP4-207ENST00000470763 DPM2O94777 84 aa10.78□□□□□ -0.68
NPHP4-207ENST00000470763 IL4P05112 153 aa10.78□□□□□ -0.68
NPHP4-207ENST00000470763 PIFOQ8TCI5 191 aa10.78□□□□□ -0.68
NPHP4-207ENST00000470763 HIST1H4GQ99525 98 aa10.78□□□□□ -0.68
NPHP4-207ENST00000470763 IGHG3P01860 377 aa10.77□□□□□ -0.68
NPHP4-207ENST00000470763 PVRIGQ6DKI7 326 aa10.77□□□□□ -0.68
NPHP4-207ENST00000470763 MRAP2Q96G30 205 aa10.77□□□□□ -0.68
NPHP4-207ENST00000470763 BAHCC1Q9P281 2608 aa10.77□□□□□ -0.68
NPHP4-207ENST00000470763 APOMO95445 188 aa10.77□□□□□ -0.69
NPHP4-207ENST00000470763 TCTEX1D4Q5JR98 221 aa10.77□□□□□ -0.69
NPHP4-207ENST00000470763 ZGRF1Q86YA3 2104 aa10.77□□□□□ -0.69
NPHP4-207ENST00000470763 MRPL35Q9NZE8 188 aaKnown RBP10.77□□□□□ -0.69
NPHP4-207ENST00000470763 PRO0461Q9UI25 63 aa10.77□□□□□ -0.69
NPHP4-207ENST00000470763 H3BRN7 92 aa10.77□□□□□ -0.69
NPHP4-207ENST00000470763 ZNF80P51504 273 aaPredicted RBP10.77□□□□□ -0.69
NPHP4-207ENST00000470763 SFTA2Q6UW10 78 aa10.77□□□□□ -0.69
NPHP4-207ENST00000470763 LYPD2Q6UXB3 125 aa10.77□□□□□ -0.69
NPHP4-207ENST00000470763 RNF185Q96GF1 192 aa10.77□□□□□ -0.69
NPHP4-207ENST00000470763 FBXL15Q9H469 300 aa10.77□□□□□ -0.69
NPHP4-207ENST00000470763 TEX22C9J3V5 150 aa10.76□□□□□ -0.69
NPHP4-207ENST00000470763 TEX36Q5VZQ5 186 aa10.76□□□□□ -0.69
NPHP4-207ENST00000470763 IGFL4Q6B9Z1 124 aa10.76□□□□□ -0.69
NPHP4-207ENST00000470763 C22orf34Q6ZV56 151 aa10.76□□□□□ -0.69
NPHP4-207ENST00000470763 SYT8Q8NBV8 401 aa10.76□□□□□ -0.69
NPHP4-207ENST00000470763 SIGLEC9Q9Y336 463 aa10.76□□□□□ -0.69
NPHP4-207ENST00000470763 ZNF462Q96JM2 2506 aa10.76□□□□□ -0.69
NPHP4-207ENST00000470763 I3L2K1 104 aa10.76□□□□□ -0.69
NPHP4-207ENST00000470763 TNFRSF6BO95407 300 aa10.76□□□□□ -0.69
NPHP4-207ENST00000470763 CCL11P51671 97 aa10.76□□□□□ -0.69
NPHP4-207ENST00000470763 POLEQ07864 2286 aa10.76□□□□□ -0.69
NPHP4-207ENST00000470763 MC5RP33032 325 aa10.75□□□□□ -0.69
NPHP4-207ENST00000470763 TTC9CQ8N5M4 171 aa10.75□□□□□ -0.69
NPHP4-207ENST00000470763 RNF125Q96EQ8 232 aa10.75□□□□□ -0.69
NPHP4-207ENST00000470763 AAMDCQ9H7C9 122 aa10.75□□□□□ -0.69
NPHP4-207ENST00000470763 PCNX1Q96RV3 2341 aa10.75□□□□□ -0.69
NPHP4-207ENST00000470763 WNK2Q9Y3S1 2297 aa10.75□□□□□ -0.69
NPHP4-207ENST00000470763 K7ENP7 123 aa10.75□□□□□ -0.69
NPHP4-207ENST00000470763 RRN3P1Q2M238 152 aa10.75□□□□□ -0.69
NPHP4-207ENST00000470763 ZNF474Q6S9Z5 364 aaPredicted RBP10.75□□□□□ -0.69
NPHP4-207ENST00000470763 ZNF502Q8TBZ5 544 aa10.75□□□□□ -0.69
NPHP4-207ENST00000470763 TENM4Q6N022 2769 aa10.75□□□□□ -0.69
NPHP4-207ENST00000470763 TLN1Q9Y490 2541 aaKnown RBP10.75□□□□□ -0.69
NPHP4-207ENST00000470763 K7EM74 188 aa10.75□□□□□ -0.69
NPHP4-207ENST00000470763 NDUFA3O95167 84 aa10.75□□□□□ -0.69
NPHP4-207ENST00000470763 ORM1P02763 201 aa10.75□□□□□ -0.69
NPHP4-207ENST00000470763 UCNP55089 124 aa10.75□□□□□ -0.69
NPHP4-207ENST00000470763 ZNF491Q8N8L2 437 aa10.75□□□□□ -0.69
NPHP4-207ENST00000470763 SHISA9B4DS77 424 aa10.74□□□□□ -0.69
NPHP4-207ENST00000470763 PRB1P04280 392 aa10.74□□□□□ -0.69
NPHP4-207ENST00000470763 SEM1Q6ZVN7 128 aa10.74□□□□□ -0.69
NPHP4-207ENST00000470763 PPP1R27Q86WC6 154 aa10.74□□□□□ -0.69
NPHP4-207ENST00000470763 MRPL16Q9NX20 251 aaKnown RBP10.74□□□□□ -0.69
NPHP4-207ENST00000470763 MRPS12O15235 138 aaKnown RBP10.74□□□□□ -0.69
NPHP4-207ENST00000470763 LYPD1Q8N2G4 141 aa10.74□□□□□ -0.69
NPHP4-207ENST00000470763 GLMPQ8WWB7 406 aa10.74□□□□□ -0.69
NPHP4-207ENST00000470763 CCL17Q92583 94 aa10.74□□□□□ -0.69
NPHP4-207ENST00000470763 MT-ATP8P03928 68 aa10.73□□□□□ -0.69
NPHP4-207ENST00000470763 SPINK8P0C7L1 97 aa10.73□□□□□ -0.69
NPHP4-207ENST00000470763 PLGLAQ15195 96 aa10.73□□□□□ -0.69
NPHP4-207ENST00000470763 C8orf86Q6ZUL3 223 aa10.73□□□□□ -0.69
NPHP4-207ENST00000470763 PRR25Q96S07 402 aa10.73□□□□□ -0.69
NPHP4-207ENST00000470763 FDCSPQ8NFU4 85 aa10.73□□□□□ -0.69
NPHP4-207ENST00000470763 FOXI1Q12951 378 aa10.73□□□□□ -0.69
NPHP4-207ENST00000470763 CDIP1Q9H305 208 aa10.73□□□□□ -0.69
NPHP4-207ENST00000470763 NXT2Q9NPJ8 142 aaKnown RBP10.73□□□□□ -0.69
NPHP4-207ENST00000470763 IGLC6P0CF74 106 aa10.72□□□□□ -0.69
NPHP4-207ENST00000470763 HLA-DMBP28068 263 aa10.72□□□□□ -0.69
NPHP4-207ENST00000470763 SRSF1Q07955 248 aaKnown RBP eCLIP10.72□□□□□ -0.69
NPHP4-207ENST00000470763 FHL3Q13643 280 aa10.72□□□□□ -0.69
NPHP4-207ENST00000470763 LINC00311Q8N616 119 aa10.72□□□□□ -0.69
NPHP4-207ENST00000470763 CYSLTR1Q9Y271 337 aa10.72□□□□□ -0.69
NPHP4-207ENST00000470763 VSTM5A8MXK1 200 aa10.72□□□□□ -0.69
NPHP4-207ENST00000470763 K7EIM0 57 aa10.72□□□□□ -0.69
NPHP4-207ENST00000470763 NDUFB3O43676 98 aa10.72□□□□□ -0.69
NPHP4-207ENST00000470763 ATP5LO75964 103 aa10.72□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms