RNA–Protein interactions for RNA: ENST00000469939.1

TTC3-213, Transcript of tetratricopeptide repeat domain 3, humanhuman

TSL 2

Gene TTC3, Length 739 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC3-213ENST00000469939 LINC00694P0DN24 101 aa1.92□□□□□ -2.1
TTC3-213ENST00000469939 CCL4P13236 92 aa1.92□□□□□ -2.1
TTC3-213ENST00000469939 KDELR1P24390 212 aa1.92□□□□□ -2.1
TTC3-213ENST00000469939 BLCAPP62952 87 aa1.92□□□□□ -2.1
TTC3-213ENST00000469939 CIRBPQ14011 172 aaKnown RBP1.92□□□□□ -2.1
TTC3-213ENST00000469939 KRTAP6-3Q3LI67 103 aa1.92□□□□□ -2.1
TTC3-213ENST00000469939 KRTAP26-1Q6PEX3 210 aa1.92□□□□□ -2.1
TTC3-213ENST00000469939 C2orf82Q6UX34 121 aa1.92□□□□□ -2.1
TTC3-213ENST00000469939 TMEM91Q6ZNR0 172 aa1.92□□□□□ -2.1
TTC3-213ENST00000469939 LINC00269Q8N2A0 174 aa1.92□□□□□ -2.1
TTC3-213ENST00000469939 TP53RKQ96S44 253 aa1.92□□□□□ -2.1
TTC3-213ENST00000469939 COL1A1P02452 1464 aaPredicted RBP1.92□□□□□ -2.1
TTC3-213ENST00000469939 DISP2A7MBM2 1401 aa1.91□□□□□ -2.1
TTC3-213ENST00000469939 RGS12O14924 1447 aa1.91□□□□□ -2.1
TTC3-213ENST00000469939 EEA1Q15075 1411 aa1.91□□□□□ -2.1
TTC3-213ENST00000469939 TNS3Q68CZ2 1445 aa1.91□□□□□ -2.1
TTC3-213ENST00000469939 PRG4Q92954 1404 aaPredicted RBP1.91□□□□□ -2.1
TTC3-213ENST00000469939 COL5A1P20908 1838 aaPredicted RBP1.91□□□□□ -2.1
TTC3-213ENST00000469939 CEP192Q8TEP8 1941 aa1.91□□□□□ -2.1
TTC3-213ENST00000469939 MUC4Q99102 2169 aa1.91□□□□□ -2.1
TTC3-213ENST00000469939 UHRF1BP1LA0JNW5 1464 aa1.91□□□□□ -2.1
TTC3-213ENST00000469939 UQCRHLA0A096LP55 91 aa1.91□□□□□ -2.1
TTC3-213ENST00000469939 LOC107986453A0A1B0GWG9 222 aa1.91□□□□□ -2.1
TTC3-213ENST00000469939 GPX1P07203 203 aa1.91□□□□□ -2.1
TTC3-213ENST00000469939 UQCRHP07919 91 aa1.91□□□□□ -2.1
TTC3-213ENST00000469939 AKR1D1P51857 326 aa1.91□□□□□ -2.1
TTC3-213ENST00000469939 SNRPD3P62318 126 aaKnown RBP1.91□□□□□ -2.1
TTC3-213ENST00000469939 RPS19BP1Q86WX3 136 aaKnown RBP1.91□□□□□ -2.1
TTC3-213ENST00000469939 FAM19A2Q8N3H0 131 aa1.91□□□□□ -2.1
TTC3-213ENST00000469939 LPAR5Q9H1C0 372 aa1.91□□□□□ -2.1
TTC3-213ENST00000469939 ERG28Q9UKR5 140 aa1.91□□□□□ -2.1
TTC3-213ENST00000469939 TRBV6-8A0A0A6YYG3 113 aa1.9□□□□□ -2.11
TTC3-213ENST00000469939 CCDC160A6NGH7 325 aa1.9□□□□□ -2.11
TTC3-213ENST00000469939 CXCL8P10145 99 aa1.9□□□□□ -2.11
TTC3-213ENST00000469939 HLA-DRB4P13762 266 aa1.9□□□□□ -2.11
TTC3-213ENST00000469939 DNAJB13P59910 316 aa1.9□□□□□ -2.11
TTC3-213ENST00000469939 CNBPP62633 177 aaKnown RBP1.9□□□□□ -2.11
TTC3-213ENST00000469939 RPS25P62851 125 aaKnown RBP1.9□□□□□ -2.11
TTC3-213ENST00000469939 OR5AS1Q8N127 324 aa1.9□□□□□ -2.11
TTC3-213ENST00000469939 Q8N2B8 174 aa1.9□□□□□ -2.11
TTC3-213ENST00000469939 MMGT1Q8N4V1 131 aa1.9□□□□□ -2.11
TTC3-213ENST00000469939 C15orf53Q8NAA6 179 aa1.9□□□□□ -2.11
TTC3-213ENST00000469939 OR4C6Q8NH72 309 aa1.9□□□□□ -2.11
TTC3-213ENST00000469939 OR5AK2Q8NH90 309 aa1.9□□□□□ -2.11
TTC3-213ENST00000469939 ZNF625Q96I27 306 aaPredicted RBP1.9□□□□□ -2.11
TTC3-213ENST00000469939 REG4Q9BYZ8 158 aa1.9□□□□□ -2.11
TTC3-213ENST00000469939 HLA-DRB4X5D2U9 266 aa1.9□□□□□ -2.11
TTC3-213ENST00000469939 KDM6AO15550 1401 aaPredicted RBP1.9□□□□□ -2.11
TTC3-213ENST00000469939 SDK1Q7Z5N4 2213 aa1.9□□□□□ -2.11
TTC3-213ENST00000469939 MYH1P12882 1939 aa1.89□□□□□ -2.11
TTC3-213ENST00000469939 CCNB3Q8WWL7 1395 aa1.89□□□□□ -2.11
TTC3-213ENST00000469939 ZNF736B4DX44 427 aaPredicted RBP1.89□□□□□ -2.11
TTC3-213ENST00000469939 J3QR89 54 aa1.89□□□□□ -2.11
TTC3-213ENST00000469939 SULT1C4O75897 302 aa1.89□□□□□ -2.11
TTC3-213ENST00000469939 CD14P08571 375 aa1.89□□□□□ -2.11
TTC3-213ENST00000469939 NCS1P62166 190 aa1.89□□□□□ -2.11
TTC3-213ENST00000469939 LSM3P62310 102 aaKnown RBP1.89□□□□□ -2.11
TTC3-213ENST00000469939 PCOTHQ58A44 107 aa1.89□□□□□ -2.11
TTC3-213ENST00000469939 GLIPR1L1Q6UWM5 242 aa1.89□□□□□ -2.11
TTC3-213ENST00000469939 TEN1Q86WV5 123 aa1.89□□□□□ -2.11
TTC3-213ENST00000469939 PATE1Q8WXA2 126 aa1.89□□□□□ -2.11
TTC3-213ENST00000469939 CST11Q9H112 138 aa1.89□□□□□ -2.11
TTC3-213ENST00000469939 COMMD3Q9UBI1 195 aa1.89□□□□□ -2.11
TTC3-213ENST00000469939 DNAJC15Q9Y5T4 150 aa1.89□□□□□ -2.11
TTC3-213ENST00000469939 MUC19Q7Z5P9 8384 aa1.89□□□□□ -2.11
TTC3-213ENST00000469939 ARHGAP31Q2M1Z3 1444 aa1.89□□□□□ -2.11
TTC3-213ENST00000469939 USP54Q70EL1 1684 aa1.89□□□□□ -2.11
TTC3-213ENST00000469939 WDR7Q9Y4E6 1490 aa1.88□□□□□ -2.11
TTC3-213ENST00000469939 LAMB4A4D0S4 1761 aa1.88□□□□□ -2.11
TTC3-213ENST00000469939 ERICH3Q5RHP9 1530 aa1.88□□□□□ -2.11
TTC3-213ENST00000469939 FAM236AA0A1B0GUQ0 79 aa1.88□□□□□ -2.11
TTC3-213ENST00000469939 FAM236BA0A1B0GV22 79 aa1.88□□□□□ -2.11
TTC3-213ENST00000469939 K7ERU9 68 aa1.88□□□□□ -2.11
TTC3-213ENST00000469939 HYPMO75409 117 aa1.88□□□□□ -2.11
TTC3-213ENST00000469939 CD3DP04234 171 aa1.88□□□□□ -2.11
TTC3-213ENST00000469939 HIST1H1BP16401 226 aaKnown RBP1.88□□□□□ -2.11
TTC3-213ENST00000469939 PCBD1P61457 104 aa1.88□□□□□ -2.11
TTC3-213ENST00000469939 RPL13AP3Q6NVV1 102 aa1.88□□□□□ -2.11
TTC3-213ENST00000469939 TEX261Q6UWH6 196 aa1.88□□□□□ -2.11
TTC3-213ENST00000469939 ZCCHC23Q6ZST2 131 aa1.88□□□□□ -2.11
TTC3-213ENST00000469939 CTAGE3PQ8IX95 158 aa1.88□□□□□ -2.11
TTC3-213ENST00000469939 OTOSQ8NHW6 89 aa1.88□□□□□ -2.11
TTC3-213ENST00000469939 INTS1Q8N201 2190 aaKnown RBP1.88□□□□□ -2.11
TTC3-213ENST00000469939 ERCC6Q03468 1493 aa1.88□□□□□ -2.11
TTC3-213ENST00000469939 UNC13CQ8NB66 2214 aa1.87□□□□□ -2.11
TTC3-213ENST00000469939 TRGV2A0A075B6R0 118 aa1.87□□□□□ -2.11
TTC3-213ENST00000469939 C3orf85A0A1B0GTC6 90 aa1.87□□□□□ -2.11
TTC3-213ENST00000469939 FOXI2Q6ZQN5 318 aa1.87□□□□□ -2.11
TTC3-213ENST00000469939 OR10AC1Q8NH08 325 aa1.87□□□□□ -2.11
TTC3-213ENST00000469939 C4orf3Q8WVX3 66 aa1.87□□□□□ -2.11
TTC3-213ENST00000469939 LINC00052Q96N35 136 aa1.87□□□□□ -2.11
TTC3-213ENST00000469939 CNTLNQ9NXG0 1405 aa1.87□□□□□ -2.11
TTC3-213ENST00000469939 METTL1Q9UBP6 276 aaKnown RBP1.87□□□□□ -2.11
TTC3-213ENST00000469939 MYOFQ9NZM1 2061 aa1.87□□□□□ -2.11
TTC3-213ENST00000469939 LAMB2P55268 1798 aa1.87□□□□□ -2.11
TTC3-213ENST00000469939 RRBP1Q9P2E9 1410 aaKnown RBP1.86□□□□□ -2.11
TTC3-213ENST00000469939 A0A1B0GV90 55 aa1.86□□□□□ -2.11
TTC3-213ENST00000469939 A6NN06 94 aa1.86□□□□□ -2.11
TTC3-213ENST00000469939 MIF4GDA9UHW6 222 aaKnown RBP1.86□□□□□ -2.11
TTC3-213ENST00000469939 NPFFO15130 113 aa1.86□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms