RNA–Protein interactions for RNA: ENST00000469602.1

SRRT-208, Transcript of serrate, RNA effector molecule, humanhuman

TSL 2

Gene SRRT, Length 376 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRT-208ENST00000469602 CSN1S1P47710 185 aa6.95□□□□□ -1.3
SRRT-208ENST00000469602 CDC34P49427 236 aaPredicted RBP6.95□□□□□ -1.3
SRRT-208ENST00000469602 C9orf47Q6ZRZ4 202 aa6.95□□□□□ -1.3
SRRT-208ENST00000469602 LINC00476Q8WZB0 136 aa6.95□□□□□ -1.3
SRRT-208ENST00000469602 FAM19A4Q96LR4 140 aa6.95□□□□□ -1.3
SRRT-208ENST00000469602 VGLL1Q99990 258 aa6.95□□□□□ -1.3
SRRT-208ENST00000469602 NIPSNAP3BQ9BS92 247 aa6.95□□□□□ -1.3
SRRT-208ENST00000469602 DEFB131BA0A096LNP1 70 aa6.94□□□□□ -1.3
SRRT-208ENST00000469602 RBAKDNA6NC62 111 aa6.94□□□□□ -1.3
SRRT-208ENST00000469602 IGLL5B9A064 214 aa6.94□□□□□ -1.3
SRRT-208ENST00000469602 J3KRW8 73 aa6.94□□□□□ -1.3
SRRT-208ENST00000469602 SLC25A5P05141 298 aaKnown RBP6.94□□□□□ -1.3
SRRT-208ENST00000469602 STAG3L2P0CL84 134 aa6.94□□□□□ -1.3
SRRT-208ENST00000469602 STAG3L3P0CL85 134 aa6.94□□□□□ -1.3
SRRT-208ENST00000469602 ARL14EPLP0DKL9 152 aa6.94□□□□□ -1.3
SRRT-208ENST00000469602 HTN1P15515 57 aa6.94□□□□□ -1.3
SRRT-208ENST00000469602 AZU1P20160 251 aa6.94□□□□□ -1.3
SRRT-208ENST00000469602 TCTAP57738 103 aa6.94□□□□□ -1.3
SRRT-208ENST00000469602 TMEM78Q5T7P6 136 aa6.94□□□□□ -1.3
SRRT-208ENST00000469602 RXFP4Q8TDU9 374 aa6.94□□□□□ -1.3
SRRT-208ENST00000469602 RAB24Q969Q5 203 aa6.94□□□□□ -1.3
SRRT-208ENST00000469602 OTORQ9NRC9 128 aa6.94□□□□□ -1.3
SRRT-208ENST00000469602 KMT2AQ03164 3969 aa6.94□□□□□ -1.3
SRRT-208ENST00000469602 TRAV12-3A0A0B4J271 114 aa6.93□□□□□ -1.3
SRRT-208ENST00000469602 PLAC8L1A1L4L8 177 aa6.93□□□□□ -1.3
SRRT-208ENST00000469602 C7orf71A4D174 169 aa6.93□□□□□ -1.3
SRRT-208ENST00000469602 LYRM9A8MSI8 78 aa6.93□□□□□ -1.3
SRRT-208ENST00000469602 HMSDA8MTL9 139 aa6.93□□□□□ -1.3
SRRT-208ENST00000469602 KLLNB2CW77 178 aa6.93□□□□□ -1.3
SRRT-208ENST00000469602 DIRC3C9JPN6 131 aa6.93□□□□□ -1.3
SRRT-208ENST00000469602 LY6G6CO95867 125 aa6.93□□□□□ -1.3
SRRT-208ENST00000469602 NMBP08949 121 aa6.93□□□□□ -1.3
SRRT-208ENST00000469602 CRISP2P16562 243 aa6.93□□□□□ -1.3
SRRT-208ENST00000469602 ZNF138P52744 262 aa6.93□□□□□ -1.3
SRRT-208ENST00000469602 ZNF345Q14585 488 aa6.93□□□□□ -1.3
SRRT-208ENST00000469602 FAM74A1Q5RGS3 127 aa6.93□□□□□ -1.3
SRRT-208ENST00000469602 ZNF493Q6ZR52 646 aa6.93□□□□□ -1.3
SRRT-208ENST00000469602 RNASE8Q8TDE3 154 aaKnown RBP6.93□□□□□ -1.3
SRRT-208ENST00000469602 TMEM263Q8WUH6 116 aaKnown RBP6.93□□□□□ -1.3
SRRT-208ENST00000469602 C16orf74Q96GX8 76 aa6.93□□□□□ -1.3
SRRT-208ENST00000469602 HYLS1Q96M11 299 aa6.93□□□□□ -1.3
SRRT-208ENST00000469602 ACTR3CQ9C0K3 210 aaPredicted RBP6.93□□□□□ -1.3
SRRT-208ENST00000469602 CYTL1Q9NRR1 136 aa6.93□□□□□ -1.3
SRRT-208ENST00000469602 ZNF492Q9P255 531 aa6.93□□□□□ -1.3
SRRT-208ENST00000469602 TRBV7-9A0A0J9YWB2 115 aa6.92□□□□□ -1.3
SRRT-208ENST00000469602 PGPA6NDG6 321 aa6.92□□□□□ -1.3
SRRT-208ENST00000469602 CXorf1O96002 111 aa6.92□□□□□ -1.3
SRRT-208ENST00000469602 GPX1P07203 203 aa6.92□□□□□ -1.3
SRRT-208ENST00000469602 GCHFRP30047 84 aa6.92□□□□□ -1.3
SRRT-208ENST00000469602 RNASE4P34096 147 aaKnown RBP6.92□□□□□ -1.3
SRRT-208ENST00000469602 DAD1P61803 113 aa6.92□□□□□ -1.3
SRRT-208ENST00000469602 CD300CQ08708 224 aa6.92□□□□□ -1.3
SRRT-208ENST00000469602 BTN1A1Q13410 526 aa6.92□□□□□ -1.3
SRRT-208ENST00000469602 KCNRGQ8N5I3 272 aa6.92□□□□□ -1.3
SRRT-208ENST00000469602 ZFAND2AQ8N6M9 145 aa6.92□□□□□ -1.3
SRRT-208ENST00000469602 ARL6IP6Q8N6S5 226 aa6.92□□□□□ -1.3
SRRT-208ENST00000469602 OR11H4Q8NGC9 324 aa6.92□□□□□ -1.3
SRRT-208ENST00000469602 Q8TAT8 98 aa6.92□□□□□ -1.3
SRRT-208ENST00000469602 CMTM2Q8TAZ6 248 aa6.92□□□□□ -1.3
SRRT-208ENST00000469602 SUN5Q8TC36 379 aa6.92□□□□□ -1.3
SRRT-208ENST00000469602 ARPC5LQ9BPX5 153 aa6.92□□□□□ -1.3
SRRT-208ENST00000469602 PYGO2Q9BRQ0 406 aa6.92□□□□□ -1.3
SRRT-208ENST00000469602 PLA2G2EQ9NZK7 142 aa6.92□□□□□ -1.3
SRRT-208ENST00000469602 IGHV4-4A0A075B6R2 117 aa6.91□□□□□ -1.3
SRRT-208ENST00000469602 ZNF324O75467 553 aaPredicted RBP6.91□□□□□ -1.3
SRRT-208ENST00000469602 DEFB130BP0DP73 79 aa6.91□□□□□ -1.3
SRRT-208ENST00000469602 DEFB130AP0DP74 79 aa6.91□□□□□ -1.3
SRRT-208ENST00000469602 AKR1C8PQ5T2L2 129 aa6.91□□□□□ -1.3
SRRT-208ENST00000469602 LGALS9CQ6DKI2 356 aa6.91□□□□□ -1.3
SRRT-208ENST00000469602 SSX7Q7RTT5 188 aa6.91□□□□□ -1.3
SRRT-208ENST00000469602 CCDC28AQ8IWP9 274 aa6.91□□□□□ -1.3
SRRT-208ENST00000469602 TMED6Q8WW62 240 aa6.91□□□□□ -1.3
SRRT-208ENST00000469602 TMEM167BQ9NRX6 74 aa6.91□□□□□ -1.3
SRRT-208ENST00000469602 APLNQ9ULZ1 77 aa6.91□□□□□ -1.3
SRRT-208ENST00000469602 TIMM8BQ9Y5J9 83 aaPredicted RBP6.91□□□□□ -1.3
SRRT-208ENST00000469602 VPS13DQ5THJ4 4388 aa6.91□□□□□ -1.3
SRRT-208ENST00000469602 A0A0D9SG52 128 aa6.9□□□□□ -1.3
SRRT-208ENST00000469602 CTXND1A0A1B0GTU2 59 aa6.9□□□□□ -1.3
SRRT-208ENST00000469602 ZNF726P1Q15940 193 aa6.9□□□□□ -1.3
SRRT-208ENST00000469602 PRR9Q5T870 116 aa6.9□□□□□ -1.3
SRRT-208ENST00000469602 Q6ZNX1 250 aa6.9□□□□□ -1.3
SRRT-208ENST00000469602 GOLT1AQ6ZVE7 132 aa6.9□□□□□ -1.3
SRRT-208ENST00000469602 ST6GAL2Q96JF0 529 aa6.9□□□□□ -1.3
SRRT-208ENST00000469602 FAM210BQ96KR6 192 aa6.9□□□□□ -1.3
SRRT-208ENST00000469602 LINC00467Q9BRT7 94 aa6.9□□□□□ -1.3
SRRT-208ENST00000469602 NDUFAF3Q9BU61 184 aa6.9□□□□□ -1.3
SRRT-208ENST00000469602 NOP10Q9NPE3 64 aaKnown RBP6.9□□□□□ -1.3
SRRT-208ENST00000469602 RPH3ALQ9UNE2 315 aa6.9□□□□□ -1.3
SRRT-208ENST00000469602 LENEPQ9Y5L5 61 aa6.9□□□□□ -1.3
SRRT-208ENST00000469602 KANTRA0A1W2PQU2 76 aa6.89□□□□□ -1.31
SRRT-208ENST00000469602 BCL2L11O43521 198 aa6.89□□□□□ -1.31
SRRT-208ENST00000469602 HTN3P15516 51 aa6.89□□□□□ -1.31
SRRT-208ENST00000469602 GNG5P63218 68 aa6.89□□□□□ -1.31
SRRT-208ENST00000469602 IQCF2Q8IXL9 164 aa6.89□□□□□ -1.31
SRRT-208ENST00000469602 C5orf17Q8NAS9 161 aa6.89□□□□□ -1.31
SRRT-208ENST00000469602 ZNF680Q8NEM1 530 aa6.89□□□□□ -1.31
SRRT-208ENST00000469602 SERTM2A0A1B0GWG4 89 aa6.88□□□□□ -1.31
SRRT-208ENST00000469602 A0A1W2PRE2 83 aa6.88□□□□□ -1.31
SRRT-208ENST00000469602 CBY3A6NI87 242 aa6.88□□□□□ -1.31
SRRT-208ENST00000469602 SNURFLB1AK76 121 aa6.88□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 97.2 ms