RNA–Protein interactions for RNA: ENST00000467985.1

COL7A1-207, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 5

Gene COL7A1, Length 709 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-207ENST00000467985 TMEM14CQ9P0S9 112 aa13.53□□□□□ -0.24
COL7A1-207ENST00000467985 H7BYZ3 331 aa13.52□□□□□ -0.25
COL7A1-207ENST00000467985 PRM2P04554 102 aa13.52□□□□□ -0.25
COL7A1-207ENST00000467985 M6PRP20645 277 aa13.52□□□□□ -0.25
COL7A1-207ENST00000467985 GCSAMLQ5JQS6 135 aa13.52□□□□□ -0.25
COL7A1-207ENST00000467985 A0A1W2PPV4 95 aa13.51□□□□□ -0.25
COL7A1-207ENST00000467985 AZU1P20160 251 aa13.51□□□□□ -0.25
COL7A1-207ENST00000467985 RAB2AP61019 212 aa13.51□□□□□ -0.25
COL7A1-207ENST00000467985 UBE2DNLQ8IWF7 75 aa13.51□□□□□ -0.25
COL7A1-207ENST00000467985 OR10G4Q8NGN3 311 aa13.51□□□□□ -0.25
COL7A1-207ENST00000467985 OR10G9Q8NGN4 311 aa13.51□□□□□ -0.25
COL7A1-207ENST00000467985 OR10G7Q8NGN6 311 aa13.51□□□□□ -0.25
COL7A1-207ENST00000467985 ODF3Q96PU9 254 aa13.51□□□□□ -0.25
COL7A1-207ENST00000467985 MRPL32Q9BYC8 188 aaKnown RBP13.51□□□□□ -0.25
COL7A1-207ENST00000467985 ZNF586Q9NXT0 402 aa13.51□□□□□ -0.25
COL7A1-207ENST00000467985 BOLA1Q9Y3E2 137 aa13.51□□□□□ -0.25
COL7A1-207ENST00000467985 TRBV19A0A075B6N1 114 aa13.5□□□□□ -0.25
COL7A1-207ENST00000467985 PLAC8L1A1L4L8 177 aa13.5□□□□□ -0.25
COL7A1-207ENST00000467985 PRAC2D3DTV9 90 aa13.5□□□□□ -0.25
COL7A1-207ENST00000467985 SEC11BP0C7V7 166 aa13.5□□□□□ -0.25
COL7A1-207ENST00000467985 DEFB130BP0DP73 79 aa13.5□□□□□ -0.25
COL7A1-207ENST00000467985 DEFB130AP0DP74 79 aa13.5□□□□□ -0.25
COL7A1-207ENST00000467985 HTN1P15515 57 aa13.5□□□□□ -0.25
COL7A1-207ENST00000467985 PDE6HQ13956 83 aa13.5□□□□□ -0.25
COL7A1-207ENST00000467985 RNF212Q495C1 297 aa13.5□□□□□ -0.25
COL7A1-207ENST00000467985 FAM122CQ6P4D5 195 aa13.5□□□□□ -0.25
COL7A1-207ENST00000467985 TMEM88Q6PEY1 159 aa13.5□□□□□ -0.25
COL7A1-207ENST00000467985 C15orf53Q8NAA6 179 aa13.5□□□□□ -0.25
COL7A1-207ENST00000467985 TMED6Q8WW62 240 aa13.5□□□□□ -0.25
COL7A1-207ENST00000467985 MRPL53Q96EL3 112 aaKnown RBP13.5□□□□□ -0.25
COL7A1-207ENST00000467985 PRELID1Q9Y255 219 aa13.5□□□□□ -0.25
COL7A1-207ENST00000467985 TIMM8BQ9Y5J9 83 aaPredicted RBP13.5□□□□□ -0.25
COL7A1-207ENST00000467985 NPIPB6E9PJ23 425 aa13.49□□□□□ -0.25
COL7A1-207ENST00000467985 PRB4P10163 310 aaPredicted RBP13.49□□□□□ -0.25
COL7A1-207ENST00000467985 HIST1H1EP10412 219 aaKnown RBP13.49□□□□□ -0.25
COL7A1-207ENST00000467985 LEPP41159 167 aa13.49□□□□□ -0.25
COL7A1-207ENST00000467985 LINC00336Q6ZUF6 198 aa13.49□□□□□ -0.25
COL7A1-207ENST00000467985 TMEM263Q8WUH6 116 aaKnown RBP13.49□□□□□ -0.25
COL7A1-207ENST00000467985 FUT9Q9Y231 359 aa13.49□□□□□ -0.25
COL7A1-207ENST00000467985 CBY3A6NI87 242 aa13.48□□□□□ -0.25
COL7A1-207ENST00000467985 ATP5G1P05496 136 aa13.48□□□□□ -0.25
COL7A1-207ENST00000467985 ATP5G3P48201 142 aa13.48□□□□□ -0.25
COL7A1-207ENST00000467985 CDC34P49427 236 aaPredicted RBP13.48□□□□□ -0.25
COL7A1-207ENST00000467985 TAS2R45P59539 299 aa13.48□□□□□ -0.25
COL7A1-207ENST00000467985 GFI1BQ5VTD9 330 aa13.48□□□□□ -0.25
COL7A1-207ENST00000467985 CCDC28AQ8IWP9 274 aa13.48□□□□□ -0.25
COL7A1-207ENST00000467985 RNASE8Q8TDE3 154 aaKnown RBP13.48□□□□□ -0.25
COL7A1-207ENST00000467985 UMAD1C9J7I0 102 aa13.47□□□□□ -0.25
COL7A1-207ENST00000467985 ACTR3CQ9C0K3 210 aaPredicted RBP13.47□□□□□ -0.25
COL7A1-207ENST00000467985 DNAH2Q9P225 4427 aa13.46□□□□□ -0.25
COL7A1-207ENST00000467985 OR7C2O60412 319 aa13.46□□□□□ -0.25
COL7A1-207ENST00000467985 CT45A10P0DMU9 189 aa13.46□□□□□ -0.25
COL7A1-207ENST00000467985 FAM3BP58499 235 aaPredicted RBP13.46□□□□□ -0.25
COL7A1-207ENST00000467985 LGALS9BQ3B8N2 356 aa13.46□□□□□ -0.25
COL7A1-207ENST00000467985 KHDC3LQ587J8 217 aa13.46□□□□□ -0.25
COL7A1-207ENST00000467985 MIR17HGQ75NE6 70 aa13.46□□□□□ -0.25
COL7A1-207ENST00000467985 AAMDCQ9H7C9 122 aa13.46□□□□□ -0.25
COL7A1-207ENST00000467985 F5H768 121 aa13.45□□□□□ -0.26
COL7A1-207ENST00000467985 NDUFB4O95168 129 aa13.45□□□□□ -0.26
COL7A1-207ENST00000467985 PYYP10082 97 aa13.45□□□□□ -0.26
COL7A1-207ENST00000467985 KIR3DS1Q14943 382 aa13.45□□□□□ -0.26
COL7A1-207ENST00000467985 FAM213BQ8TBF2 198 aa13.45□□□□□ -0.26
COL7A1-207ENST00000467985 PHYHIPLQ96FC7 376 aa13.45□□□□□ -0.26
COL7A1-207ENST00000467985 LINC00477Q96M19 166 aa13.45□□□□□ -0.26
COL7A1-207ENST00000467985 NOP10Q9NPE3 64 aaKnown RBP13.45□□□□□ -0.26
COL7A1-207ENST00000467985 M0R3E3 92 aa13.44□□□□□ -0.26
COL7A1-207ENST00000467985 BLNKQ8WV28 456 aa13.44□□□□□ -0.26
COL7A1-207ENST00000467985 PYGO2Q9BRQ0 406 aa13.44□□□□□ -0.26
COL7A1-207ENST00000467985 SLC25A2Q9BXI2 301 aa13.44□□□□□ -0.26
COL7A1-207ENST00000467985 TRAV12-3A0A0B4J271 114 aa13.43□□□□□ -0.26
COL7A1-207ENST00000467985 CTXND1A0A1B0GTU2 59 aa13.43□□□□□ -0.26
COL7A1-207ENST00000467985 HMGB3O15347 200 aaKnown RBP13.43□□□□□ -0.26
COL7A1-207ENST00000467985 SLC25A5P05141 298 aaKnown RBP13.43□□□□□ -0.26
COL7A1-207ENST00000467985 RAB5CP51148 216 aa13.43□□□□□ -0.26
COL7A1-207ENST00000467985 ALKAL2Q6UX46 152 aa13.43□□□□□ -0.26
COL7A1-207ENST00000467985 DPPA3Q6W0C5 159 aa13.43□□□□□ -0.26
COL7A1-207ENST00000467985 IQCF2Q8IXL9 164 aa13.43□□□□□ -0.26
COL7A1-207ENST00000467985 RAB24Q969Q5 203 aa13.43□□□□□ -0.26
COL7A1-207ENST00000467985 FAM167A-AS1Q96KT0 104 aa13.43□□□□□ -0.26
COL7A1-207ENST00000467985 PAXXQ9BUH6 204 aa13.43□□□□□ -0.26
COL7A1-207ENST00000467985 OR51M1Q9H341 326 aa13.43□□□□□ -0.26
COL7A1-207ENST00000467985 SNURFLB1AK76 121 aa13.42□□□□□ -0.26
COL7A1-207ENST00000467985 J3KRW8 73 aa13.42□□□□□ -0.26
COL7A1-207ENST00000467985 M0R2N4 97 aa13.42□□□□□ -0.26
COL7A1-207ENST00000467985 EIF3GO75821 320 aaKnown RBP eCLIP13.42□□□□□ -0.26
COL7A1-207ENST00000467985 NBEAP1P0C6P0 100 aa13.42□□□□□ -0.26
COL7A1-207ENST00000467985 EXOC3-AS1Q8N2X6 119 aa13.42□□□□□ -0.26
COL7A1-207ENST00000467985 ATG101Q9BSB4 218 aa13.42□□□□□ -0.26
COL7A1-207ENST00000467985 DNAH17Q9UFH2 4485 aa13.41□□□□□ -0.26
COL7A1-207ENST00000467985 FAT2Q9NYQ8 4349 aa13.41□□□□□ -0.26
COL7A1-207ENST00000467985 UBE2L3P68036 154 aaKnown RBP13.41□□□□□ -0.26
COL7A1-207ENST00000467985 ERCC8Q13216 396 aa13.41□□□□□ -0.26
COL7A1-207ENST00000467985 ICAM4Q14773 271 aa13.41□□□□□ -0.26
COL7A1-207ENST00000467985 FAM74A1Q5RGS3 127 aa13.41□□□□□ -0.26
COL7A1-207ENST00000467985 PQLC2Q6ZP29 291 aa13.41□□□□□ -0.26
COL7A1-207ENST00000467985 C9orf47Q6ZRZ4 202 aa13.41□□□□□ -0.26
COL7A1-207ENST00000467985 C7orf71A4D174 169 aa13.4□□□□□ -0.26
COL7A1-207ENST00000467985 MAP1LC3B2A6NCE7 125 aa13.4□□□□□ -0.26
COL7A1-207ENST00000467985 KLLNB2CW77 178 aa13.4□□□□□ -0.26
COL7A1-207ENST00000467985 CXorf1O96002 111 aa13.4□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 67.6 ms