RNA–Protein interactions for RNA: ENST00000464750.5

U2AF1-206, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 1 (best)

Gene U2AF1, Length 966 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-206ENST00000464750 OR51M1Q9H341 326 aa18.14■□□□□ 0.49
U2AF1-206ENST00000464750 HSPB11Q9Y547 144 aa18.14■□□□□ 0.49
U2AF1-206ENST00000464750 NBEAP1P0C6P0 100 aa18.13■□□□□ 0.49
U2AF1-206ENST00000464750 FAM122CQ6P4D5 195 aa18.13■□□□□ 0.49
U2AF1-206ENST00000464750 FAM19A4Q96LR4 140 aa18.13■□□□□ 0.49
U2AF1-206ENST00000464750 LINC00477Q96M19 166 aa18.13■□□□□ 0.49
U2AF1-206ENST00000464750 PAXXQ9BUH6 204 aa18.13■□□□□ 0.49
U2AF1-206ENST00000464750 AGPAT4-IT1Q9H0P7 198 aa18.13■□□□□ 0.49
U2AF1-206ENST00000464750 FUT9Q9Y231 359 aa18.13■□□□□ 0.49
U2AF1-206ENST00000464750 IGKV2-40A0A087WW87 121 aaPredicted RBP18.12■□□□□ 0.49
U2AF1-206ENST00000464750 PRSS29PA6NIE9 313 aa18.12■□□□□ 0.49
U2AF1-206ENST00000464750 KLLNB2CW77 178 aa18.12■□□□□ 0.49
U2AF1-206ENST00000464750 IGKV2D-40P01614 121 aaPredicted RBP18.12■□□□□ 0.49
U2AF1-206ENST00000464750 OR10J4P0C629 311 aa18.12■□□□□ 0.49
U2AF1-206ENST00000464750 FAM3BP58499 235 aaPredicted RBP18.12■□□□□ 0.49
U2AF1-206ENST00000464750 RNF141Q8WVD5 230 aa18.12■□□□□ 0.49
U2AF1-206ENST00000464750 FXYD5Q96DB9 178 aa18.12■□□□□ 0.49
U2AF1-206ENST00000464750 A0A1B0GVY2 172 aa18.11■□□□□ 0.49
U2AF1-206ENST00000464750 BTN1A1Q13410 526 aa18.11■□□□□ 0.49
U2AF1-206ENST00000464750 SMIM3Q9BZL3 60 aa18.11■□□□□ 0.49
U2AF1-206ENST00000464750 MBD2Q9UBB5 411 aa18.11■□□□□ 0.49
U2AF1-206ENST00000464750 PKHD1P08F94 4074 aa18.11■□□□□ 0.49
U2AF1-206ENST00000464750 KIAA1109Q2LD37 5005 aa18.1■□□□□ 0.49
U2AF1-206ENST00000464750 GAGE12BA1L429 117 aa18.1■□□□□ 0.49
U2AF1-206ENST00000464750 GAGE7O76087 117 aa18.1■□□□□ 0.49
U2AF1-206ENST00000464750 GAGE12FP0CL80 117 aa18.1■□□□□ 0.49
U2AF1-206ENST00000464750 GAGE12GP0CL81 117 aa18.1■□□□□ 0.49
U2AF1-206ENST00000464750 GAGE12IP0CL82 117 aa18.1■□□□□ 0.49
U2AF1-206ENST00000464750 CD300CQ08708 224 aa18.1■□□□□ 0.49
U2AF1-206ENST00000464750 C9orf47Q6ZRZ4 202 aa18.1■□□□□ 0.49
U2AF1-206ENST00000464750 PHYHIPLQ96FC7 376 aa18.1■□□□□ 0.49
U2AF1-206ENST00000464750 OR7C2O60412 319 aa18.09■□□□□ 0.49
U2AF1-206ENST00000464750 CRISP2P16562 243 aa18.09■□□□□ 0.49
U2AF1-206ENST00000464750 RPL12P30050 165 aaKnown RBP18.09■□□□□ 0.49
U2AF1-206ENST00000464750 FFAR4Q5NUL3 377 aa18.09■□□□□ 0.49
U2AF1-206ENST00000464750 TMEM78Q5T7P6 136 aa18.09■□□□□ 0.49
U2AF1-206ENST00000464750 VGLL1Q99990 258 aa18.09■□□□□ 0.49
U2AF1-206ENST00000464750 BATF3Q9NR55 127 aa18.09■□□□□ 0.49
U2AF1-206ENST00000464750 DYNC1H1Q14204 4646 aaKnown RBP18.09■□□□□ 0.49
U2AF1-206ENST00000464750 RNASE4P34096 147 aaKnown RBP18.08■□□□□ 0.48
U2AF1-206ENST00000464750 OR5I1Q13606 314 aa18.08■□□□□ 0.48
U2AF1-206ENST00000464750 ZNF680Q8NEM1 530 aa18.08■□□□□ 0.48
U2AF1-206ENST00000464750 DNAH11Q96DT5 4516 aa18.08■□□□□ 0.48
U2AF1-206ENST00000464750 ZNF324O75467 553 aaPredicted RBP18.07■□□□□ 0.48
U2AF1-206ENST00000464750 IFNA5P01569 189 aa18.07■□□□□ 0.48
U2AF1-206ENST00000464750 DAZ2Q13117 558 aaKnown RBP18.07■□□□□ 0.48
U2AF1-206ENST00000464750 SCGB1C1Q8TD33 95 aa18.07■□□□□ 0.48
U2AF1-206ENST00000464750 ZNF503Q96F45 646 aa18.07■□□□□ 0.48
U2AF1-206ENST00000464750 TRAV26-1A0A087WT03 109 aa18.06■□□□□ 0.48
U2AF1-206ENST00000464750 GPX1P07203 203 aa18.06■□□□□ 0.48
U2AF1-206ENST00000464750 CCL18P55774 89 aa18.06■□□□□ 0.48
U2AF1-206ENST00000464750 UBE2L3P68036 154 aaKnown RBP18.06■□□□□ 0.48
U2AF1-206ENST00000464750 SOHLH1Q5JUK2 328 aa18.06■□□□□ 0.48
U2AF1-206ENST00000464750 PRR9Q5T870 116 aa18.06■□□□□ 0.48
U2AF1-206ENST00000464750 Q6ZTI0 123 aa18.06■□□□□ 0.48
U2AF1-206ENST00000464750 EIF4E3Q8N5X7 224 aaKnown RBP18.06■□□□□ 0.48
U2AF1-206ENST00000464750 ZFAND2AQ8N6M9 145 aa18.06■□□□□ 0.48
U2AF1-206ENST00000464750 C11orf72Q8NBR9 251 aa18.06■□□□□ 0.48
U2AF1-206ENST00000464750 LINC00467Q9BRT7 94 aa18.06■□□□□ 0.48
U2AF1-206ENST00000464750 GSN-AS1Q9NRJ2 163 aa18.06■□□□□ 0.48
U2AF1-206ENST00000464750 ZNF492Q9P255 531 aa18.06■□□□□ 0.48
U2AF1-206ENST00000464750 PKD1P98161 4303 aa18.05■□□□□ 0.48
U2AF1-206ENST00000464750 NMBP08949 121 aa18.05■□□□□ 0.48
U2AF1-206ENST00000464750 M6PRP20645 277 aa18.05■□□□□ 0.48
U2AF1-206ENST00000464750 HOXA5P20719 270 aa18.05■□□□□ 0.48
U2AF1-206ENST00000464750 ZNRF2Q8NHG8 242 aa18.05■□□□□ 0.48
U2AF1-206ENST00000464750 GNPNAT1Q96EK6 184 aaPredicted RBP18.05■□□□□ 0.48
U2AF1-206ENST00000464750 ANXA2RQ3ZCQ2 193 aa18.04■□□□□ 0.48
U2AF1-206ENST00000464750 KHDC3LQ587J8 217 aa18.04■□□□□ 0.48
U2AF1-206ENST00000464750 Q8TAT8 98 aa18.04■□□□□ 0.48
U2AF1-206ENST00000464750 TMPRSS5Q9H3S3 457 aa18.04■□□□□ 0.48
U2AF1-206ENST00000464750 LINC00588Q9Y4M8 146 aa18.04■□□□□ 0.48
U2AF1-206ENST00000464750 A0A0J9YY99 117 aa18.03■□□□□ 0.48
U2AF1-206ENST00000464750 RANP62826 216 aaKnown RBP18.03■□□□□ 0.48
U2AF1-206ENST00000464750 C1orf134Q5TEV5 83 aa18.03■□□□□ 0.48
U2AF1-206ENST00000464750 Q9H3A6 140 aa18.03■□□□□ 0.48
U2AF1-206ENST00000464750 WFDC1Q9HC57 220 aa18.03■□□□□ 0.48
U2AF1-206ENST00000464750 ALG5Q9Y673 324 aa18.03■□□□□ 0.48
U2AF1-206ENST00000464750 CSN1S1P47710 185 aa18.02■□□□□ 0.48
U2AF1-206ENST00000464750 ZNF138P52744 262 aa18.02■□□□□ 0.48
U2AF1-206ENST00000464750 TAS2R45P59539 299 aa18.02■□□□□ 0.48
U2AF1-206ENST00000464750 LYPD1Q8N2G4 141 aa18.02■□□□□ 0.48
U2AF1-206ENST00000464750 RXFP4Q8TDU9 374 aa18.02■□□□□ 0.48
U2AF1-206ENST00000464750 RGS13O14921 159 aa18.01■□□□□ 0.47
U2AF1-206ENST00000464750 EIF3GO75821 320 aaKnown RBP eCLIP18.01■□□□□ 0.47
U2AF1-206ENST00000464750 TRGV2A0A075B6R0 118 aa18■□□□□ 0.47
U2AF1-206ENST00000464750 TRGV1A0A0A0MS02 117 aa18■□□□□ 0.47
U2AF1-206ENST00000464750 NBDYA0A0U1RRE5 68 aa18■□□□□ 0.47
U2AF1-206ENST00000464750 TCL1AP56279 114 aa18■□□□□ 0.47
U2AF1-206ENST00000464750 Q6ZQT7 251 aa18■□□□□ 0.47
U2AF1-206ENST00000464750 SSX7Q7RTT5 188 aa18■□□□□ 0.47
U2AF1-206ENST00000464750 KLF12Q9Y4X4 402 aa18■□□□□ 0.47
U2AF1-206ENST00000464750 MUC4Q99102 2169 aa17.99■□□□□ 0.47
U2AF1-206ENST00000464750 IGHV1OR15-1A0A075B7D0 117 aa17.99■□□□□ 0.47
U2AF1-206ENST00000464750 TRBV7-9A0A0J9YWB2 115 aa17.99■□□□□ 0.47
U2AF1-206ENST00000464750 RBAKDNA6NC62 111 aa17.99■□□□□ 0.47
U2AF1-206ENST00000464750 IBA57Q5T440 356 aaKnown RBP17.99■□□□□ 0.47
U2AF1-206ENST00000464750 TP53TG3Q9ULZ0 132 aa17.99■□□□□ 0.47
U2AF1-206ENST00000464750 ACOT6Q3I5F7 207 aaPredicted RBP17.98■□□□□ 0.47
U2AF1-206ENST00000464750 C18orf15Q96N68 181 aa17.98■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 58.5 ms